Pungitius pungitius (ninespine stickleback): 119222317
Help
Entry
119222317 CDS
T07626
Symbol
agrn
Name
(RefSeq) agrin isoform X1
KO
K06254
agrin
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119222317 (agrn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ppug00535
]
119222317 (agrn)
Proteoglycans [BR:
ppug00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
119222317 (agrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
Kazal_2
Laminin_G_2
Kazal_1
NtA
Laminin_EGF
EGF
CFAI_KAZAL
SEA
Laminin_G_3
hEGF
Motif
Other DBs
NCBI-GeneID:
119222317
NCBI-ProteinID:
XP_037334755
LinkDB
All DBs
Position
Unknown
AA seq
2115 aa
AA seq
DB search
MGSRRTLGAGRTALLVAGLLAALWHRCSAGCPERDLENREEEANIVLTGTVDEIINLDPV
HNTYSCKVRVWRYLKGKSDVNQEILLDGGNKLMIGGFGNPGICDNQVATGDTRIFFLNPA
LEAMGPEHKNELMLNSSLMRITLRNLEDVEHCVEAHKYINADKPPHFTPPQPPDSCKGML
CGFGAVCEFDQADPAHAKCVCKRADCPSLVAPVCGSDSSTYSNECELEKAQCNTQRRIKV
LRKGPCSLKDPCTDVACSYGSTCIQSSDGLSAKCMCPLGCEGKREQTVCGSDGEDYRNEC
LLHRHACKNQKNIRVQYPGPCDPCKENENNLNTMCRVRALTRQAIVFRPPEMCPAANEPM
CASDGQTYSSECAMDATGLQKGIKLRKIHAGPCKRLERCQEACPFNGVCVVEQQSARCSC
EPIECDGTYKPVCGRDGRTYTNDCARRRAECLGRLLIAVKHPGPCDLSIPSPCLGKECDH
GAVCVVKNGEPVCECPEACPQTSDPVCGSDGHSYGSPCEMRAMGCALQRAIQIQHKGPCD
EACANCSFGAICDAQSGQCVCASECVESHQPVCGSDGSTYSSECELHVRACKEQMDLRVV
SQGECKTCGSTVCAWGAICVKNKCECQQCSGEGLALVCGSDGVTYKNECELRTSSCMQKT
QIDVAKPGSCDEDCGSGGSGSGAESCEQDRCRMFGGSWDEDAEDDRCVCDFSCQSVPLNT
VCGSDGKNYSNECQLKKARCEKQEHLMTQNQGPCAAISATSPPAPTPPQHCSHSVYGCCH
DNVTAALGVGLAGCPSTCQCNVHGSYKGTCDPASGQCSCKPGVGGQKCDRCEPGFWNFRG
IVTENMSGCTPCNCDATGSVRDDCEQMSGLCSCKTGVKGMKCNVCPDGSKMGTNGCGEAP
EAPASCDKLMCKFGATCTEVNGQAHCECPPPDCDDQNKIQVCGSNGETYADQCQLRTIAC
RLREDIAVQHFGQCTDTISGPAERPTPKPPATTTAAATITTPAPFLPNQVFALPPPRTKE
PETPRRPPPTAHSSTLMHNRAKPNQTIPTEPRRATPAHSSRRIPVSSGGAMSSEGSGSGE
PSGDDQTEEEKEEEEEEAGSGIPTEASGAEETVGSTLASTTAPTAEERSSCDNTEFGCCP
DGRTPSSNPEGANCPSTMRFSGFLHLDQVEGQEIFYTREMEDPKSELFGETARSIEGALN
ELFRKSAAHKDFMSVRVRNLAPSNSILAFVEAHFKPDTRLTVEDIEGALLKQLKASRETG
IAVKKPEDENIRFTNYGLSSVPFFTTTSTTTTASVTTAAPATTTTTPTPSTTTRPPPTSM
YITRRPPGTTRRPNSGRRTTTTTTSAPVTTPVPTTTTTAVTSTEPHPATTAAHSRGRPSH
RPAKPCASHPCLHGGTCEEEGNDFSCQCPAGRGGSVCEKVIRYFIPSFGGQSYLAFPTMS
AYHTVRIAMEFRASEMTGVLLYNGQTGKKDFISLALVNGKVELRFNTGSGTGTVVSKVQV
HQGRWHQLVLTRNRRSAMLSVDNEPHMEGESPQGTDGLNLDTDLFVGGVPEDIKQDVRER
TAVATGLVGCIRMLDVNNRRLNLQESGGDSMYGSGVGECGNNPCQPNPCKNGAACQVKEA
EMFHCKCSKGFWGPKCADVHDPCEPNRCHPSSRCQALPEGGYKCECPMGREGRHCETVAE
RRGAYMPLFNGDSYLELKGLHLYGQDLRQKVSMTVVLMANDSNGLIFYNGQKSDGRGDFI
SLSLNDGFLEFRYDLGKGPATIRSLKNMQLNVWNTINLERSNRKGEITVNRKDPVRGEAP
KSRKNLHVDLNLKESLFVGGAPDYSRLARVAALTEGFRGTIQEIILMGNPILREENALRS
SSVAMFQDHPCSQEPCHNGGICKPTLQTYECLCLHGFRGERCQSTVYEKAAGEPEAIAFD
GRTFIEYHNAVTKSQLTNEIPDPESLENPSDQSEKALLVNKFELSIRTETTQGLVLWSGK
GVERSDYIALAIVDGHVQMTYDLGSKPVVLRSSVRVDTNRWIRIKASRALRDGSLQVGNE
AAVTGSSPLAATQLDTDGALWLGGLEELAVARRLPKAYSTSFVGCIKDVVVDGVELHLVE
DALNSPQILHCSAAK
NT seq
6348 nt
NT seq
+upstream
nt +downstream
nt
atgggttcccggcggacactcggggccggccggacagcgctgctcgtggcggggctgctc
gcggctctgtggcaccgctgctccgcgggctgccccgagagagacctggagaacagggaa
gaggaggccaacatagttttgaccggcaccgtggacgaaataatcaacctggacccggtg
cacaatacgtactcgtgcaaggtcagggtgtggcgctacttgaaagggaagtccgacgtc
aaccaggaaattctcctggacggcggcaacaagctgatgatcggcgggttcggcaacccc
gggatctgcgacaaccaggtggccacgggcgacacgcgcatattcttcctcaaccctgct
ctggaggccatggggccggaacacaagaacgaactcatgctcaactcgagtctgatgagg
attacccttcgcaacctggaggacgtagagcactgcgtagaagcccacaaatatataaat
gcagacaagcctcctcacttcacaccgccccagcctcctgacagctgcaaagggatgctg
tgtggcttcggcgctgtgtgtgagtttgaccaagccgacccggcccacgctaagtgtgtt
tgcaagagagcggactgcccgtccttggtggcgcccgtgtgcggatcggattcctccacc
tactccaacgagtgtgagctggagaaagcccagtgcaacacgcagagacgcatcaaggtt
ctgcgcaaggggccctgctctctcaaggacccctgcaccgacgtggcctgcagctacggc
agcacctgcatccagtcgtcggacggcctgtcggcgaaatgcatgtgccccctgggctgc
gagggcaagcgcgagcagacggtgtgcggcagtgacggagaggactaccgcaacgagtgc
ctgctccaccgccacgcctgcaagaaccagaagaacatacgggtgcagtacccggggccc
tgcgacccgtgcaaagagaacgagaacaacctgaacacgatgtgccgggtgcgggctctc
acccgccaggccatcgtcttccggcccccggagatgtgccccgcggccaacgagccgatg
tgcgccagcgacgggcagacctacagcagcgagtgcgccatggacgcaacgggattgcag
aagggcatcaagctgaggaagatccacgcgggaccgtgcaaacggctggagcgctgtcag
gaggcgtgccccttcaacggcgtgtgcgtggtggagcagcagagcgcccgctgctcctgc
gaacccatcgagtgcgacggcacctacaagcccgtctgcggcagggacggccgcacctac
accaacgactgcgcccggcgcagggccgagtgcctgggcaggctgctcatcgccgtcaag
cacccggggccctgtgatctcagcataccgagcccctgcctgggtaaggagtgcgatcac
ggggcggtgtgcgtggtcaagaacggcgagccggtgtgcgagtgccccgaggcgtgcccc
cagacctccgaccccgtgtgcgggtccgacggccacagctacggcagcccctgcgagatg
cgggccatgggttgtgccctgcagagggccattcagatccaacacaaagggccctgtgat
gaggcttgtgccaactgctccttcggcgcgatctgcgacgcgcagagcgggcagtgtgtg
tgcgcgtcggagtgcgtggagtcccaccagcccgtgtgcggcagcgacggcagcacctac
agcagcgagtgtgagctgcacgtgcgggcctgcaaagagcagatggacctccgcgtggtc
agccagggagagtgcaaaacatgcggcagcacagtttgtgcctggggggccatctgcgtc
aagaacaagtgcgagtgccagcagtgctctggcgagggccttgccctggtgtgcgggagc
gatggcgtcacctacaaaaacgagtgtgaactccgcacgtcctcctgcatgcagaagact
caaattgatgtggcgaaacccggcagctgtgacgaagactgtggctcaggggggtcgggc
tcaggcgcggagagctgtgaacaggaccgctgtcgcatgttcgggggctcgtgggacgag
gacgcggaggacgaccgctgcgtctgtgacttctcctgccaaagtgtgcctctcaacacg
gtttgtggctcagatgggaaaaattacagcaacgagtgccagctgaagaaggccagatgt
gagaaacaagagcacttgatgactcagaatcagggaccctgtgcagcgatctctgcgaca
tctccccctgcgccgacacccccccagcactgcagtcactctgtgtacggctgctgccac
gacaacgtgacggctgccttaggagtcggactggctggatgtcccagcacctgtcagtgt
aacgtccacggctcctacaaaggcacgtgtgacccggcctcggggcagtgctcctgtaag
ccgggcgtcgggggacagaagtgcgaccgctgcgagccgggcttctggaacttccgcggc
attgtgacggagaacatgagcggctgcacgccgtgtaactgcgacgccacaggctcggtc
cgggacgactgcgagcagatgtcgggtctgtgctcctgcaagacgggagtgaagggcatg
aagtgcaacgtgtgtccagatggaagcaagatgggcaccaatggatgtggcgaagctccc
gaggccccggcttcatgcgacaagttgatgtgcaaatttggagccacttgcacagaggtg
aacggccaggcccactgcgagtgcccgccgcccgactgcgatgaccagaacaaaatccag
gtgtgcggctcaaacggggagacctacgccgaccagtgccagctgaggaccatcgcctgc
aggctgagggaggacatcgccgtgcaacactttggacagtgcacagataccatctctggg
ccggcagagcgacccacccccaaaccccccgccaccaccaccgccgccgccaccatcacc
accccggctccattcctcccaaaccaggtgttcgccctgccgcctccgcggacgaaagag
ccggagaccccccggcggcccccgcccaccgcccactcctccaccctcatgcacaaccga
gcaaagcccaaccaaaccatcccaaccgagccgcggcgggccacccccgcccactcctcc
cgcagaatcccggtttcctccggcggtgccatgtcgtccgagggctcgggcagcggggag
ccaagcggggacgaccagaccgaggaggagaaggaggaggaggaggaggaagcaggtagc
ggcatcccaacggaggccagtggagcagaggagacagtcggttccacgctggccagcacc
actgcccccaccgccgaggaacgctcgtcctgtgacaacacagagttcggctgctgcccc
gacggcaggacgccgtccagcaatccggagggcgccaactgcccctccaccatgaggttc
agcggtttcctgcacttggaccaagtggagggccaggagatcttctacacccgggagatg
gaggaccccaaatctgagctgtttggagaaacggcgcggagcatagagggggctctcaac
gagttgttcaggaagtcagcggcgcacaaagacttcatgagcgtccgtgtccggaacctg
gcccccagcaactccatcctggcctttgtggaggcccacttcaaaccagatacgagattg
acggtggaggacattgaaggagccctgctgaaacagctcaaggcctccagggagaccggc
atcgccgtgaagaagcccgaggacgagaacatccgcttcaccaattatggcctctcctcc
gtccccttcttcaccaccacttccaccaccaccacggcgtcagtcaccacagctgctccc
gccaccaccaccactacccccaccccctccacaactaccaggcctccgccgacctccatg
tacatcacccgtcgcccgcccggcaccacccgcaggcccaacagcggtaggcgtaccacc
accaccaccacctccgcaccggtcaccacaccagtaccgaccaccaccaccacggcagtc
acctccaccgagccccacccggcgaccactgcggctcacagcagggggcggccctcccac
aggccggccaagccctgcgcctcccacccgtgcctccacgggggcacctgcgaggaggag
ggcaacgacttcagctgccagtgccccgccggccgaggaggctccgtgtgcgagaaggtg
atcagatacttcatcccgtccttcgggggccagtcgtacctggcgttcccgaccatgagc
gcctaccacacggtccgcatcgccatggagttcagagcgtccgagatgaccggcgtactg
ctctacaacggccagacgggcaagaaggacttcatctctctggctctggtcaacggcaag
gtggagctcaggttcaacacgggttcgggcacaggcacggtggtcagcaaagtgcaagtc
catcagggccgctggcaccagctggtgttgacccgcaaccggcgcagcgccatgctgagc
gtggacaacgagcctcacatggagggcgagagcccgcaaggcaccgacggcctgaacctc
gacaccgacctgttcgtcggcggggtgcccgaggacattaagcaggacgtgagggaaagg
acagcggtggccacgggactagtgggctgcatccgcatgctggatgtcaacaaccggagg
ctcaacctgcaggagagcgggggcgacagcatgtacggcagcggcgtgggcgaatgcggc
aacaacccctgccagccaaatccctgcaagaacggcgctgcgtgccaggtcaaggaggcg
gagatgttccactgcaagtgcagcaaggggttctggggtccaaaatgtgctgacgtccat
gacccctgcgagcccaacaggtgccacccgtcctcccggtgccaggcgctgcccgaggga
ggctacaaatgcgagtgtcctatggggcgtgaagggaggcactgcgagacagtggctgag
aggagaggggcttacatgccgctattcaacggggactcttacctggagctgaaggggctc
catctctacgggcaagatctgcggcaaaaagtgagcatgacagtggtcctcatggccaac
gactccaacggcttgatcttctacaacggccagaaatcggacgggaggggagacttcatc
tctctgtccctcaatgatggcttcctggagttccgctacgacctgggaaaggggcccgcc
accatcaggagtttgaaaaatatgcagctgaacgtgtggaacaccatcaacctggagcgc
tccaaccgcaaaggagagatcacggtgaacaggaaggaccctgtccgcggggaggcgccg
aaatcacgcaagaacctgcacgtagatcttaacctgaaagagtctctttttgttggcgga
gctcccgattacagccgactagcaagagtggcggctctcacggagggcttcaggggaacg
atccaagagatcatcctcatgggtaaccccatcctcagggaggagaacgccctgcgctcc
agcagcgtggccatgttccaggaccacccgtgctcccaggagccctgccacaacggcggc
atctgcaagcccacgctccaaacctacgagtgcctctgcctccacgggttcaggggggag
cgctgtcagagcaccgtctacgagaaggccgccggagagcccgaggccattgcctttgac
gggcggacgttcatcgagtaccacaacgccgtcacgaagagccaactgaccaatgagatc
ccagatcccgagtctctggagaacccatctgaccagagtgagaaggctctgctggtgaac
aagtttgagctgagcatccggacggagaccacccagggcctggtgctgtggagcgggaag
ggcgtggagcgctccgactacatcgccctggccatcgtggacggacacgtccagatgacc
tacgacctcggctccaagccggtggtgctgcgctcctcggtgcgggtcgacaccaaccgc
tggatacgcatcaaggccagcagggcacttagagacggctccctacaggtcggcaacgag
gcggccgtaacggggtcgtcgcctttggcagcaacgcagctggacacggacggagcgctg
tggttgggtggtctggaggagctggcggtggcccggcggttgcccaaggcctacagcacc
agctttgtcggctgcatcaaggatgtggtggtggacggcgtggagctccacctggtggaa
gacgccttgaacagcccccaaatattacactgctccgccgccaaataa
DBGET
integrated database retrieval system