Pungitius pungitius (ninespine stickleback): 119222878
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Entry
119222878 CDS
T07626
Symbol
trpc5a
Name
(RefSeq) short transient receptor potential channel 5a
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ppug01009
]
119222878 (trpc5a)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ppug04040
]
119222878 (trpc5a)
Protein phosphatases and associated proteins [BR:
ppug01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119222878 (trpc5a)
Ion channels [BR:
ppug04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119222878 (trpc5a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_5
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
119222878
NCBI-ProteinID:
XP_037335747
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All DBs
Position
1:645788..683505
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AA seq
1067 aa
AA seq
DB search
MNPMTQLYYKKATYSPYRDRIPLQIVRAEVELSAEERAYLTAVEKGDYAGVKHALREAEV
YYNMDVNCLDPLGRSALLIAIENENLEIMELLLDHGIHTGDALLYAIRKEVVGAVELLLS
HRRPSGEKQVPSLMMDSQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRCD
CVECVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEF
RQEYEELSQQCKRFAKDLLDQARSSRELETILNHRDNDQSEELDPRQCHDLAKLKLAIKY
HQKEFVAQPNCQQLLATLWYDGFPGWRRRHWAVKLVTCFIIGLLFPFFSLIYLLAPKSAL
GRFIKKPFIKFICHTASYLTFLFLLLLASQHIARTNLHMQGPPPTLVEWMILPWVLGFIW
AEIKEMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAFVKYNSSRPREEWEMWHPTL
IAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLN
QLYFYYETKASEEPNNCKGIRCERQNNAFSTLFETLQSLFWSIFGLLNLYVTNVKARHEF
TEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGT
LPPPFNIIPSPKSVLYLLLWLHNKLCRGGPAPGEESHKCENLREFTERHADSLIQNQHYQ
EVIRSLVKRYVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGNRRPPRRHYSSS
SDAARDDAMASEDDSESGDGAGGSRSKGVTFMNPLQDEDRPSPKLGVSALVRSVSGMPQE
EGGEEGVEEELEEGVRWGEEEEEEEAKPKSNGLRTAVVPPSSTHVLPSPSFSTSFSSSFA
RTRSRLQRLSTPGSKTDSFKRLSYLFSRSKRRAPPMPLSLRSPPSYTISDGLLRPLGSHG
HGVTLSETRLNEVGRSMDVDRPSFSPRRANGRDSLHTLPLPPPCPCQSLHCASNMSESSS
RLLDSSEDVFQGGGVGGAGADGRGAVTIGGWVGPCDDAIEDSVTTQL
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccatgacgcagttgtactacaagaaggcgacgtactcgccgtaccgcgaccgc
atcccgctgcagatcgtgcgggcggaggtggagctgtcagcggaggagagggcctacctc
accgctgtggagaaaggtgactatgcgggcgtcaaacacgccctccgcgaggccgaggtc
tactacaacatggacgtgaactgcctggacccgctgggccggagcgcgctcctcattgcc
atcgagaacgagaacctggagatcatggagctgctgctggaccacggcatccacacgggc
gacgccctcctctacgccatccgcaaggaggtggtgggcgccgtggagctgctgctgtcg
caccgcaggcccagcggcgagaaacaggtgccctcgctgatgatggacagtcagttctca
gagttcaccccggacataactcccatcatgctcgctgctcacaccaacaactacgagatc
atcaagctgctcgtccagcggaaggtcaccattcctcgaccacaccagatccgatgcgac
tgtgtggagtgcgtgtccagctcagaggtggacagtctgcggcactccaggtctcgactc
aacatctacaaggccctggcctcgccctcgctcatcgcgctctccagtgaggaccccata
ctcacggccttccgcctgggctgggagctcaaggagctcagcaaggtggagaatgagttc
cggcaggagtacgaggagctgtcccagcagtgcaaacgcttcgccaaggaccttctggat
caggccaggagttccagggagctggagaccatcctgaaccaccgagacaacgaccagagc
gaggagctggaccccaggcagtgccacgacctggccaagctcaagctggccatcaagtac
caccagaaagagttcgtggctcagcctaactgccagcagctcctcgccacgctgtggtac
gacggcttcccgggctggaggaggagacactgggccgtcaaactggtcacctgcttcatc
atcggactcctgtttcccttcttctcactgatctacctgctggctcctaagagcgccctg
ggccgcttcatcaagaagcccttcatcaagttcatctgccacacggcgtcctacctgacc
ttcctcttcctgctgctgctggcctcgcagcacatcgcccgcaccaacctgcacatgcag
gggcccccccccacgctggtggagtggatgatcctgccgtgggtgctcgggttcatctgg
gcagagatcaaggagatgtgggacgggggcttcacagagtacatccacgactggtggaac
ctgatggacttcgccatgaactcgctctacctggccaccatatcgctgaagatagtggcc
ttcgtcaagtacaactcctctcgcccccgggaggagtgggagatgtggcaccccacgctg
atcgcagaggccctcttcgccatcgccaacatcttcagctcgctcagactcatctcgctc
ttcaccgccaactcccacctcgggcccctgcagatctccctgggccggatgctgctggac
atcctcaagttcctcttcatctactgcctggtcctgctggcgttcgccaacggtctgaac
cagctgtacttctactacgagaccaaagcctcagaggaacccaacaactgcaagggcatc
cgctgcgagaggcagaacaacgccttctccacgttgttcgagaccctgcagtctctcttc
tggtccatattcgggctgctcaacctctacgtcaccaacgtgaaggcccgccacgagttc
accgagttcgtgggggccaccatgttcggcacgtacaacgtgatctcactggtggtgctg
ctcaacatgctgatcgccatgatgaacaactcgtaccagctgatcgccgaccacgccgac
atcgagtggaagttcgcccgcaccaagctgtggatgagctacttcgacgagggcggcacg
ctgccgcctccgttcaacatcatcccgagccccaagtccgtcctctacctgctgctgtgg
ctgcacaacaagctgtgcagggggggcccggcgcccggggaggaatcgcacaagtgcgaa
aacctgcgggagttcacggaacgccacgccgacagtctgatccagaaccagcattaccag
gaagtgatccggagcctggtgaagaggtacgtggcggccatgatacgcagcgccaagacg
gacgagggactgacggaggagaacttcaaggagctgaagcaggacatctccagtttccgc
tacgaggtcctggatctcctcggcaaccggcgtcctccacggcgacactactcctcatcc
agcgacgcggcgagagacgacgccatggcctcagaggacgacagcgaatcaggtgacggc
gccgggggctcgaggtcgaagggtgtgaccttcatgaacccgctgcaggatgaggacagg
ccgtcgccgaagctcggcgtctctgccctggtgcgctccgtgtcagggatgccccaggag
gaaggaggcgaggagggcgttgaggaggaactggaggagggcgtcaggtggggggaagag
gaggaggaagaggaggcgaaaccaaagagcaacgggctgaggacggccgtcgtccctccg
tcctccacccacgtcctcccgtccccctccttctccacctccttctcctcgtctttcgcc
cgcaccaggagccgactgcagcgcctctccactccggggtcgaagacggactctttcaag
cgcctctcctacctgttctcgcgctccaagcgccgggccccgcccatgccgctttccctc
cggtccccgccctcctacaccatctcggacgggctgctccgccccctggggagccacggc
cacggcgtgaccctgagcgagacccgcctgaacgaggtgggccgctcgatggacgtcgat
cgcccctcgttctcgccgcggagagctaacgggcgggactccctgcacacgctgcccctc
cccccgccgtgcccctgccaatccctgcactgtgcttccaacatgtccgagtccagctcg
cgcctcctggactccagcgaggacgttttccagggcgggggcgttggaggggcgggcgcg
gacggaagaggcgcggtgacgatcggcgggtgggtgggaccctgcgacgacgccatagag
gactcggtgaccacgcagctatag
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