KEGG   Pungitius pungitius (ninespine stickleback): 119223037
Entry
119223037         CDS       T07626                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DP alpha 1 chain-like
  KO
K06752  MHC class II antigen
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Pathway
ppug04145  Phagosome
ppug04514  Cell adhesion molecules
ppug04672  Intestinal immune network for IgA production
ppug05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    119223037
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    119223037
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    119223037
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    119223037
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ppug04147]
    119223037
Exosome [BR:ppug04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   119223037
  Exosomal proteins of epithelial cells
   119223037
  Exosomal proteins of breast milk
   119223037
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 Ig_2 C2-set_3 ig I-set
Other DBs
NCBI-GeneID: 119223037
NCBI-ProteinID: XP_037336023
LinkDB
Position
1:561604..563333
AA seq 243 aa
MKTMKMMKMMLVLVLSGVFCVSADVLHEDIRINGCSDSDGEFMYGLDGEELWYADFKLGK
GVKPQPSFVDPMEYQEGAYEQALADQQICKSNQKIHVKAFKDFPLERDPPSSHMIYPKDD
VELGVKNSLICHVTGFFPAPVTFSWTKNQENVTEGASRNIPYLNKDGTFNQFSSLEFTPK
LGDIYSCRVEHLALNDGPLVKFYDVQVSQPSVGPAVFCGVGLTVGLLGVAAGTFFLIKGN
ECS
NT seq 732 nt   +upstreamnt  +downstreamnt
atgaagaccatgaagatgatgaagatgatgctcgtcctcgtcctctctggtgtcttctgt
gtctcagctgatgttctacatgaggacattcgtattaatggctgttctgactctgatgga
gagttcatgtacggtctggatggagaagagctctggtacgcagactttaaactgggaaaa
ggagtcaaacctcagcccagttttgtggatcccatggagtaccaagaaggagcttatgaa
caagctttggctgatcaacagatctgcaaatctaaccagaaaattcatgtgaaagccttc
aaggactttccactggagcgagatcctccttccagtcacatgatctaccccaaggacgac
gtggagctgggagtgaagaactcgctcatctgtcatgtgactggtttctttcctgctcca
gtgaccttctcctggaccaagaaccaggagaacgtcactgaaggagccagcaggaacatt
ccttacctcaacaaagatggaaccttcaaccagttctccagccttgagttcaccccaaag
ctgggagacatctacagctgcagggtggaacatctggccctgaacgacggtccactggtc
aagttctatgatgtgcaggtgtctcagcccagcgttggaccagcggtcttctgtggagtc
ggtctgactgttggtctcctcggagtcgctgctggaaccttcttcctcatcaaaggaaac
gagtgcagctga

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