KEGG   Pungitius pungitius (ninespine stickleback): 119223038
Entry
119223038         CDS       T07626                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DP alpha 1 chain-like
  KO
K06752  MHC class II antigen
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Pathway
ppug04145  Phagosome
ppug04514  Cell adhesion molecules
ppug04672  Intestinal immune network for IgA production
ppug05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    119223038
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    119223038
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    119223038
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    119223038
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ppug04147]
    119223038
Exosome [BR:ppug04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   119223038
  Exosomal proteins of epithelial cells
   119223038
  Exosomal proteins of breast milk
   119223038
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 Ig_2 ig I-set C2-set_3
Other DBs
NCBI-GeneID: 119223038
NCBI-ProteinID: XP_037336026
LinkDB
Position
1:1621888..1623854
AA seq 239 aa
MKTMMMMKMMLVLSGVFCVSADVLHEGIRVSGCSDSDEEYMFGVDGEEIWYVDLKQGKGV
KHFPSFGVPVDLPGAYEVAVADLQSCRNILKMDREAYKDLPLERDPPSSHMIYPKDAVEL
GENNLLICHVTGFFPAPVTFSWTKNQENVTEGTSRNLPFPNKDGTYNQFSTLEFTPKLED
IYSCRVEHLALNHPLVKFYDVKVSQPSVGPAVFCGVGLTVGLLGVAAGTFFLIKGNECR
NT seq 720 nt   +upstreamnt  +downstreamnt
atgaagaccatgatgatgatgaagatgatgctcgtcctctctggtgtcttctgtgtctca
gctgacgttttacatgagggcatccgtgtcagtggctgttctgactctgatgaagagtac
atgttcggtgtggatggagaagagatctggtacgtagacctcaagcagggaaaaggagtc
aaacatttccccagctttggggttcctgtggacctaccaggagcttatgaagtcgctgtg
gctgatctacagtcctgcagaaatatcctgaaaatggatcgggaagcctacaaggacctc
ccactggagcgagatcctccttccagtcacatgatctaccccaaggacgccgtggaactg
ggagagaacaacttgctcatctgtcatgtgactggtttctttcctgctccagtgacgttc
tcctggacaaagaaccaggagaacgtcactgagggaaccagcaggaaccttcccttcccc
aacaaggatggaacctacaaccagttctccacccttgagttcaccccaaagctggaagac
atctacagctgcagggtggaacatctggccctgaaccatccactggtcaagttctatgat
gtgaaggtgtctcagcccagcgttggaccagcggtcttctgtggagtcggtctgactgtt
ggtctcctcggagtggctgctggaaccttcttcctcatcaaaggaaacgagtgcagatga

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