Pungitius pungitius (ninespine stickleback): 119227245
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Entry
119227245 CDS
T07626
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04620
Toll-like receptor signaling pathway
ppug04621
NOD-like receptor signaling pathway
ppug04622
RIG-I-like receptor signaling pathway
ppug05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
119227245 (traf3)
04621 NOD-like receptor signaling pathway
119227245 (traf3)
04622 RIG-I-like receptor signaling pathway
119227245 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119227245 (traf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF3_RING
zf-C3HC4
DUF4201
zf-C3HC4_2
Sina_ZnF
ATG16
zf-C3HC4_4
TolA_bind_tri
Baculo_PEP_C
DASH_Dad2
Snapin_Pallidin
Crescentin
GAS
AAA_13
DUF1664
Fez1
Fzo_mitofusin
FapA
DUF724
Rx_N
Motif
Other DBs
NCBI-GeneID:
119227245
NCBI-ProteinID:
XP_037341754
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MSAGRSADGREVQIPLQQVAPSLTPALSVASPVHRQVNPWPPSDTTPQSVSPGVPAGFLP
LHKGFRDHFALTPEAKYCCEACSLVLCQPRQTECGHRFCQSCINDILSHPNPVCPADMEP
LFKDKIFRDVCCHREIMALKVYCRSEANGCQEQMSLQQIPDHLNVCPFFEVPCPLGKCKE
RMMRKEIPDHLSWKCKHRETSCEFCMTKMPMTDLQKHKETVCPAFPVSCPNHCSFSSLPR
SELSSHQNDCPKAQVCCQFHRYGCTFQGLNQDMRQHESTSAGEHLRMIANKHSVLENKVE
DMKGELLERYKVLPALSTRLSELENQSDELREKNRQVEQKLATMQKLMSSHSEKLLEVEL
ELRSLRGLRDEVENLRGTLENVRTRLNTLEQGGRSGTGSTTHTLATLENQLKRHDEMLSV
HEIRLADMDLRFQVLETASYNGTLIWKIRDYKRRKQEAVGAKTLSLYSQPFYTGYFGYKM
CARVYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLMDQGPLRKHLGDAFKP
DPNSSSFRRPAAEMNIASGCPLFVSQTLLETGSYIKDDTIFIKVTVDTSDLPDP
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcggggaggagtgctgacgggagggaggtgcagattcccctccagcaggtggcg
ccctccctgaccccggccctctcagtggcttcacctgttcaccgtcaagtcaatccgtgg
ccccccagcgacaccacgcctcaaagtgtgtctccaggtgtccctgcagggttcctacct
ctgcacaaaggattcagagaccactttgcattgactcccgaagctaaatactgctgtgag
gcctgcagcctggtcctgtgtcagccccgccagacggaatgtggacaccgcttctgtcag
agctgcatcaacgacattctcagtcatcctaacccggtgtgtccagctgacatggagcct
ctcttcaaagacaagatcttcagagacgtctgctgccatcgtgagatcatggctctgaaa
gtttattgtcgcagtgaagctaacggctgtcaggagcagatgagtctgcagcagattcct
gaccacctgaatgtgtgtcctttcttcgaggtaccttgtcctttgggtaaatgtaaggag
cgaatgatgaggaaagagatccccgaccacctgagctggaaatgtaaacacagagagacc
agctgcgagttctgtatgacaaagatgccaatgactgacctgcagaaacacaaggagacg
gtgtgtccagccttccctgtatcgtgtccaaaccactgctccttctcctccctcccccgg
agtgagctgtccagccaccagaacgactgtcccaaagctcaggtgtgctgccagttccac
cgctatggctgcaccttccagggtttgaaccaggatatgaggcaacatgagtccacctcg
gcaggagaacacctaagaatgatagccaacaaacactctgtgttagagaacaaggtggag
gacatgaaaggtgagctattggagaggtacaaggtgcttcctgctctcagcactcgactc
tctgaactggagaaccagagcgacgagctgagggagaagaaccggcaggtggagcagaag
ctggccactatgcagaaactaatgagctctcactcggagaagctcctggaggtggaactg
gagcttcgatctctccgtggcctccgagatgaggtggaaaacttgaggggaaccctagag
aatgtccggacaagactgaacactctcgaacaagggggacgcagtgggactggatccaca
acacacactctggcaaccctggagaatcagctgaaacgacatgatgaaatgctgagtgtc
catgagatccgactagccgacatggacctgcgtttccaggtgctggagaccgcgagttac
aacggaaccctgatctggaagatccgtgactacaagagaaggaaacaagaagccgtgggg
gcaaagacgctctcgctctactcacagccattttataccggttacttcggctacaagatg
tgcgcccgcgtctacctgaacggagacggcatgggcaaggggacgcacctgtccctgttc
ttcgtggtgatgagaggcgagtacgacgccctgctgccctggcccttcaaacagaaggtg
actctgatgctcatggaccagggtccattaaggaaacacttgggcgatgccttcaagccg
gatccaaacagcagcagcttcaggcgtcctgcagctgagatgaacattgcctctggctgt
cctctgtttgtctctcagactctcctggagactggcagctacatcaaagacgacaccatc
ttcatcaaggttacagtggatacctctgaccttcctgatccgtga
DBGET
integrated database retrieval system
