Pungitius pungitius (ninespine stickleback): 119227712
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Entry
119227712 CDS
T07626
Name
(RefSeq) otoferlin-like
KO
K19949
otoferlin
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119227712
Membrane trafficking [BR:
ppug04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
119227712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
FerA
Motif
Other DBs
NCBI-GeneID:
119227712
NCBI-ProteinID:
XP_037342640
LinkDB
All DBs
Position
14:complement(12428894..12444268)
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AA seq
1792 aa
AA seq
DB search
MKRSKHRGHKEDRNGDEPAILETENLGMFMGGGPEADTVSLASVTAVTDNVSNKRSKPDI
KMEPSSGRPVDYQISVTVVEARQLIGLNMDPMVCVEIGEDKKYTSMKESTNCPYYNEYFV
FDFHVPPDVMFDKILKISVIHSKNLLRSGTLVGTFKLDVGTIYFQPEHQFYHKWALLSDP
EDISAGCKGYVKCDVAVVAKGDTIKTPHKANESEEDDIEGNLLIPDGVPAERQWARYYVK
IYRAEGLPRMNTSIMANVKKAFIGENKDLVDPYVQVQFAGQRGKTSVQKSCYEPIWNEQI
VFTEMFPPLCKRMKIQLRDSDKVNDVAIGTHFLDLRTISNDGDKGFLPTLGPAWVNMYGS
TRTYTLMDEYQELNEGLGEGVSFRARLLISLGVEILDPSSPDISNSTDVGLEGIPNISET
ATGKVEEFFLFGSFLEATMIDRKIGDKPINFEVTIGYYGNEMDGAARPKTKGKKGGGDGG
EEETELIHNSSEEETDEDGDMTSVATTPPMKPVITDRNYFHLPYFERKPCVFIKSWWQDQ
RRRLYNANIIDNVADKLEDGLNDVQEIIKTEKTYPERRLRGVLEELSQGCSQFLSLANQD
QSLSGRTKLDRERLKLCMSEVESIGQQAKAMRTQVKKTTVRDKIKLAQNFLTRLRFLADE
PQHSVPDVFIWMISNGKRIAYARVPSKDILYSAIREETGKDCGKVKTIFLRIPGKKGFGP
AGWTVQSKIEIYLWLGLTRQRKDYLRGLPNGFEENKLSKGPGMPCSPPISLTYMMKQIFQ
LRVHMYQARSLFAADSTGLSDPFARVFFSTQSQVTEVLAETLCPTWDQLLVFENVELFGE
ATELRDDPPIIVIEIYDQDTVGKAEFMGRTFAKPVVKMADEHYGPPRFPPQLEYYQIYRG
NCTAGEMLAAFELLQIGPNGKADLPPIDGPTDVDRGPILPVPLGIRPVLSKYRIEVLFWG
LRDLKRVNLAQVDRPRVDIECAGKGVQSALIPNYKKNPNFSTLVKWFEVDLPENELLHPP
LNIRVVDCRAFGRYTLVGSIAVPSLRKFIYRATDKQANNFSTTGEIIVVSLEPEPSFKKM
DTVVKLDSGSDAVVKVEDDDKDGKGKKKKRKKGDEIEEEELDESMLDWWSKYFASIETLT
EALKAQEAALSDSEDKDDMDIADGGEIKPDDSPLKGPKRGKGKKDKKKHAIDPFEKKKPK
LDELKVYSKELESEFDNFEDWLHSFNLFRGKGGDEDDQNVTDEDRIVGKFKGSLCMYKVS
DEMQRDVSFESTMGMFQNIPHNDPINILVRIYVIRATDLHPADINGKADPYIAIKLGKTE
IKDKENYISKQLNPLFGKSFDVEATFPMDSTLTVSIYDWDLVGTDDLIGETKLDLENRYY
SKHRATCGVTCNYAIHGYNVWRDPMKPTQILAKLCKEGKLDGPHYGPGGRVKVENRVFMA
PTEIEDDNGLKKQTDEHLALTVLKHWEEIPRVGCKLVPEHVETRPLLHPDKPGIEQGRIE
MWVDMFPKDMTAPGPPLDISPRKPKKFELRVIIWNTDEVVLEDDDIFTGEKSSDIFVRGW
LKGQQEDKQDTDVHYHSITGEGNFNWRFVYPFDYLMAEEKIVISKKESMFAWDETEYKIP
ARLNLQVWDADHFSADDFLGAIELDLNRFPRGAKSAKQCSIEMVTNEGEMPTVSIFKQKR
IKGWWPFVARNEDDEFELTGKVEAELHLLTGEEAERSPVGEGRNEPEPLEKPNRPDIALL
WFLIPFKAAKNLICNQYRWLTIKIVTALLLLAILALFLYNMPGYMVKKMLGA
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcagtaagcaccgtggacacaaggaggacagaaacggagatgagccggccatc
ctggagacagaaaacctgggcatgttcatgggaggaggcccagaggctgacaccgtgtca
ctggcctcagtcacagccgtcaccgacaacgtttccaataaaagatccaagccagacata
aagatggagcccagttctggaagaccagtagattaccaaatcagtgtgacagtggttgaa
gccaggcagctgattgggctgaatatggatccaatggtctgtgtggagattggagaggac
aaaaagtacacctcaatgaaagaatcgaccaactgcccatactacaacgaatatttcgtc
tttgacttccatgtccctccagatgttatgttcgacaaaatcctgaagatatctgtaatt
cactccaaaaatcttctgcgtagtggaacactggttggaacttttaaactggatgttggc
acaatctacttccagcctgaacatcagttctaccataagtgggctttgttgtccgaccct
gaggacatctcagccggttgcaaaggctacgttaagtgtgatgttgcagttgtggccaaa
ggagacaccataaagactccacacaaggccaatgaatccgaagaagacgacatagagggc
aatctcttgataccggacggggtgcctgcggagcgacaatgggcccgttactacgtgaag
atttacagagccgagggcctccccaggatgaacaccagcatcatggccaacgtcaaaaag
gcctttataggagaaaataaggacctggttgatccttatgtccaagtgcagtttgctggg
cagagagggaaaacatcagttcaaaagagctgctatgagcccatctggaacgagcagatt
gttttcaccgagatgttcccaccgctctgcaagcggatgaagatccagctccgcgactcg
gacaaagtgaacgatgttgctataggaacgcacttcttagacctacggaccatttccaat
gatggggacaaaggcttccttcccacgctgggacccgcctgggtcaacatgtacggctcc
acgcgtacctacactctgatggacgagtaccaggagttaaacgaggggcttggagaggga
gtgtccttcagggcccgtctgctcatcagcctgggtgtggagatcctggacccctcctcg
cctgacatttccaactccacagacgtggggttggagggaatacccaacatctcagagacc
gcaaccgggaaggttgaggaattttttctctttggctctttcctggaggccacaatgatc
gacagaaagatcggggacaagcccatcaactttgaagtcaccataggttactatggaaac
gagatggatggggctgccaggccaaaaacgaagggtaagaagggaggaggagacggcggc
gaagaggaaaccgaactgatccacaactccagtgaagaggagacggatgaggacggggac
atgacctcagtggcaactactcctcccatgaagcccgtcatcactgaccgaaactacttc
cacctgccgtattttgagaggaagccgtgtgtcttcatcaaaagctggtggcaagaccag
agacggaggctgtacaacgccaacatcatcgacaacgtcgcagataaactggaggacgga
ctcaatgatgtgcaagagatcatcaagacagagaagacgtatcctgagcgcagactgaga
ggcgtcctcgaggaactcagccagggttgcagtcagtttctttcgctggcaaaccaggat
cagagtctgtccggcagaaccaaacttgacagggagagactgaagctgtgcatgtcagaa
gtggagagcatcggccagcaagccaaagccatgagaacccaggtgaagaaaaccacagtg
agagataaaatcaagctggctcagaacttcctcaccaggctgcgcttcctggctgatgaa
cctcaacacagcgttcccgacgtcttcatatggatgataagtaatgggaaacgcatcgct
tatgcacgtgttccctccaaagacatcctttattccgctatacgggaggagacgggaaag
gactgtggcaaagttaagacaatctttctgaggatccctggaaagaaaggttttgggcct
gctggctggacagtccagtccaagatagagatctatctgtggctgggtctgactcgacag
cgcaaagactacctgagaggtctgcccaatggatttgaggaaaacaagttgtccaaagga
cccggcatgccatgctcacctcccatcagcctcacatacatgatgaagcagatcttccag
cttagggtccacatgtaccaggcccgcagcctgtttgccgctgacagcacaggtctgtct
gatccctttgcaagagtcttcttctccactcaaagccaggtcactgaggtgctggctgag
actctgtgcccgacgtgggaccagctgctggtctttgagaacgtagagttgtttggagag
gccacggagctgagagacgaccctcctattattgtcatagaaatctatgatcaagacaca
gtgggtaaagctgagttcatgggcagaacctttgccaagcctgtggtcaagatggcggac
gagcactatggccccccacgcttccctcctcagctggagtactatcagatctaccgcggg
aactgcaccgccggagaaatgctggcagcctttgaactgctgcagattggccccaatggg
aaagctgacctgcctcccatagacggccccacggacgtggaccgcggcccaatcctgccg
gtgccactggggatcagacccgtgctcagcaagtacagaattgaggtgttgttctggggc
ttaagggacctgaagagggtgaatctggcccaggtggatcggcctcgtgtggacattgaa
tgtgccgggaagggagtgcagtccgccctcatccccaattacaagaaaaacccaaacttc
agcacccttgtcaagtggtttgaagtggacttgcctgaaaacgagttgcttcacccgccg
ctgaacatccgggtggtggactgcagggccttcggccgctacactttggtcggttccatc
gctgtgcccagcctgcgcaagttcatctacagggcaacagacaagcaggccaataacttc
tccactacaggggaaataattgttgtcagcctggagccggagcccagttttaagaagatg
gacactgtggtcaaactagactctggctctgatgctgtggtcaaagttgaggatgacgac
aaggatgggaaggggaaaaagaagaagaggaagaagggggacgagattgaagaggaggaa
cttgacgagagcatgttggactggtggtccaaatattttgcctccattgaaactttgaca
gaggctctcaaggctcaagaagctgctctctcagattcggaggacaaagatgacatggac
attgcagacggcggagagatcaaacccgatgactcgcctttgaaaggccccaagagagga
aaaggaaagaaggacaagaagaagcacgcaatcgatccgttcgagaagaaaaagccgaaa
ctggatgagttgaaggtgtactcgaaagaactagagagcgagttcgacaactttgaagac
tggctccacagctttaacctgttcagagggaaaggtggtgatgaagacgaccaaaacgtg
accgatgaagacagaattgttggaaaattcaaaggctctctgtgcatgtacaaagtgtcg
gatgaaatgcagagagacgtgagcttcgagtccaccatgggaatgtttcagaacatcccg
cacaacgatcccattaatatcctcgtgcgcatctacgtcatcagggcaacagatctgcat
ccagctgatatcaatggaaaagctgatccttacattgcaatcaaactgggtaagacggag
atcaaagacaaagagaactacatctcaaaacaactgaaccccttgtttggcaaatccttt
gacgtggaggccacgttcccaatggattccacactcactgtgtcaatttatgactgggac
ctggtgggcaccgacgatctgatcggagaaactaaacttgacctggagaaccgttactac
agcaaacacagagccacgtgtggcgttacatgtaactacgccatccacggctacaacgtt
tggcgagacccgatgaaaccaacacaaatcctggctaagctctgtaaggagggcaaactg
gatgggcctcactacggccctggaggaagagtgaaggtggaaaaccgcgtcttcatggca
ccgactgagatagaggatgataatggtttaaagaagcagacggatgaacatctggccctg
accgtcctgaagcactgggaggaaatcccccgggtcggctgcaaactggtgccggagcac
gtggagaccagacccctgctccacccggacaaaccagggattgaacaagggaggattgag
atgtgggtggatatgtttccgaaggacatgactgcccctggccctcctctggatatttca
ccaaggaaaccaaagaagtttgaactgagggtgatcatctggaacacagatgaggtcgtt
ctggaggacgatgacatcttcactggcgagaagtcaagtgacatatttgtccgaggctgg
ttgaaggggcagcaggaggacaagcaggacaccgacgtccactaccactccatcaccggg
gagggcaacttcaactggcgcttcgtctacccgttcgattacctcatggctgaagagaag
atcgtcatctccaagaaagagtccatgtttgcctgggacgagaccgaatacaagattcca
gctcgtcttaatctgcaagtgtgggacgccgaccatttctcagcggatgacttcttaggc
gccatcgagctggacctcaaccgtttcccccgtggtgcaaagtcggccaagcagtgctcc
atagagatggtgaccaatgaaggagagatgcccacggtctccatcttcaaacagaagagg
atcaaaggctggtggccattcgtggccagaaacgaagatgacgagtttgaactcacagga
aaagtggaagcagagctgcacctcctgaccggagaggaggcagagagaagcccggttggg
gaaggacgcaatgaaccggagccactggagaaacccaaccgtccagatatcgccctcctc
tggttcctcatccctttcaaagctgcgaaaaacctgatttgtaaccagtacaggtggctg
accatcaagatcgtcactgctctcctgctgctggccatcttggctcttttcctttacaac
atgcctggttacatggtgaagaaaatgttgggggcttga
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integrated database retrieval system
