Pungitius pungitius (ninespine stickleback): 119229114
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Entry
119229114 CDS
T07626
Symbol
nr1h3
Name
(RefSeq) oxysterols receptor LXR-alpha
KO
K08536
liver X receptor alpha
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03320
PPAR signaling pathway
ppug04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119229114 (nr1h3)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
119229114 (nr1h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119229114 (nr1h3)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ppug03310
]
119229114 (nr1h3)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
119229114 (nr1h3)
Nuclear receptors [BR:
ppug03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
119229114 (nr1h3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
119229114
NCBI-ProteinID:
XP_037345174
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Position
4:complement(23197850..23207672)
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AA seq
462 aa
AA seq
DB search
MSTLSVTDIPDVGHDERKAFVGAPELQLDCLAEEGGGMKHGGLLSLADLSRPDDPPAPPH
NGLPLSDMRSPLPGEPSDVKPDPSGGDAPAGSDGQPVKRKKGPAPKMLGNEVCSVCGDKA
SGFHYNVLSCEGCKGFFRRSVIKSAQYNCKNSGRCEMDMYMRRKCQQCRLRKCREAGMLE
QCVLSEEQIRVKKMKKQHEDDTARSSAVVTPTPAPQETAPLEPQQQEMIEKLVAMQKQCN
KRSFLDRPGVTPWPQSQDLLNREVRQQRFAHFTELAIMSVQEIVDFAKQLPGFLELTRED
QIALLKTSTIEIMLLETSRRYNPAIDSITFLKDFSYNKEDFAKAGLQFEFINPIFEFSKG
MNDLHLDEAEYALLIAINIFSADRPNVQDHDLVERLQQPYVDALRSYISIKRPNDHLMFP
RMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVNE
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgctgtctgtgactgatatcccagatgttggtcatgatgagaggaaggcgttt
gtcggggcccctgagctgcagctggactgcttggctgaggagggcggcggaatgaagcac
ggcggcctgctgtcgctggctgacctctcccggcccgacgacccccccgcgcccccccac
aacggcctgccgctgagcgacatgaggagccctctgccgggggagcccagcgacgttaag
ccggacccgtccgggggcgacgcgcccgccggctcagacgggcagccggtgaagaggaag
aaggggccggcgccgaagatgctgggcaacgaggtgtgcagcgtgtgcggcgacaaggcc
tcgggcttccactacaacgtcctgagctgcgagggctgcaagggctttttccggcgcagc
gtcatcaagagcgcccagtacaactgcaagaacagcggccgctgcgagatggacatgtac
atgcgccgcaagtgccagcagtgtcgcctgcgcaagtgccgcgaggcgggcatgctggag
cagtgcgtgctctccgaggagcaaatccgagtgaagaagatgaagaagcagcacgaggac
gacacggcgcgctcgtccgccgtggtcacgccgacgccggcgccgcaggagacggcgccg
ctggagccgcagcagcaggagatgatcgagaagctggtggccatgcagaagcagtgcaac
aagaggtccttcctggaccggcccggagtcacgccgtggccgcagagtcaggacttgctg
aaccgagaagtgcgtcagcagcggttcgcccacttcacggagctcgccatcatgtcggtg
caggagatcgtggacttcgccaagcagcttcctggtttcctggagctcacacgggaggac
cagatcgctctcctcaagacgtccaccattgagattatgctgctggagacgtcccggcgc
tacaaccctgctattgacagcatcacattcctgaaggatttcagctacaacaaggaggac
ttcgccaaagcagggcttcagtttgagttcatcaaccccatcttcgagttctctaaagga
atgaatgacctgcatctggacgaggccgagtacgcgctgctcattgccatcaacatcttc
tccgcagatcggcccaacgtgcaggatcacgacctggtggagcggctgcagcagccctac
gtggacgcgctgcgctcctacatctccatcaagagacccaatgaccacctgatgtttccc
cgcatgctgatgaagctggtgagccttcgcacgctgagcagcgtccactcggagcaggtc
ttcgcccttcgcctccaggacaagaagctcccccccctgctctctgaaatctgggacgtc
aacgagtga
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