Pungitius pungitius (ninespine stickleback): 119230222
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Entry
119230222 CDS
T07626
Symbol
pkp1b
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ppug04812
]
119230222 (pkp1b)
Cytoskeleton proteins [BR:
ppug04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
119230222 (pkp1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
ZER1-like_2nd
Motif
Other DBs
NCBI-GeneID:
119230222
NCBI-ProteinID:
XP_037347216
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All DBs
Position
8:1228744..1235431
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AA seq
676 aa
AA seq
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MSVEPLKSALSIGNVDDTSLALPSGPHGRSGQQRVLEQVQTIRRSRSKKSSSSSSRSASM
SLSPTSPPYDSIFSEALKSPTSPTNGFLFFSKSITQEKNAVVGSKKTASSTHLYSSGHAA
LGQTLNGRGVSDQRSAPPQRLPSNLSAHRASVNGTGRSHADGRVPADQVDGAKAPPESPV
NGAPKTQAASGGAADITMKEAVEYLSHQDETYQHCGASYIQHNAFIDDKAKEEVLRLNGI
HPLVALLRGSSPRVSQTASAALRNLSFRSDGNKERVHRSGGVTEAAALLRDADSAETQKQ
LTGLLWNLSSVDSLKPDLLKSALPVLMERVILPYTTGPDRTGSQDQDEVFFNATGCLRNL
SSTKQSNRQALRKCPGLVDSLVAHVRERVDAGTPDDKSVENCVCTLHNLTFQLEAEAPAL
FSRIAALAQDANRGPPGKADAGPIGCFGPQSKPPGHERRFDFPVVEDPQPSGAGWLIHSK
TMQSYLSVLETSQREETQEACCGALQNLTAQDSTVSSVMSHTIVQKLNGLRVICPLVKSE
KVNIQKSAVALLGNLTKNPNLTNAIARKALPNLLDVLSAGTEKGNESDDTLAMACQTSNG
LLMNQPEMGKRLLNNKLIDSLKDLSQIGYLPKSSKAAALLLRNMWSEKDLQSALKKQGMS
KASFVNDITAAALKPT
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtggagccgctgaagtctgcgctttccatcgggaacgtggacgacacgtcgctg
gcgctgccgtccgggccgcacggccgctcgggtcagcagcgcgtcctggaacaagtgcag
acgatccggaggagcaggtccaagaagtccagcagcagcagcagcaggagcgcatcgatg
tccttatcccccacatctccgccgtacgactccattttctcagaagctctcaagtcaccg
accagcccaactaatggattcctcttcttttctaaaagtatcacgcaagagaaaaacgcc
gtcgtgggatcgaagaagaccgcgtcttccacccatctgtacagctcgggtcacgccgcg
ctcggacagaccctcaacggccgcggcgtctcggaccagcgctccgctcccccgcagagg
ctcccgtccaacctgagcgcccaccgggcctccgtgaacggcacgggccggagccacgcc
gacgggcgcgtcccggccgaccaagtcgacggcgccaaagccccgccggagtcccccgtc
aacggcgccccgaagacgcaggcggcttccggcggagctgcagacatcaccatgaaggag
gccgtggagtacctttcccaccaggacgagacttatcagcactgcggcgcgtcctacata
cagcacaacgccttcatcgacgacaaggccaaagaggaggtgttgaggctcaacgggatc
catcctctggtggccctgctgcgcggctccagcccccgagtcagccagacggcgtcggcc
gccctgcggaacctctccttccgcagcgacggcaacaaggagagggtccaccgctcgggg
ggcgtcacggaggccgcggcgctgctccgggacgccgactccgcggagacacagaaacag
ctgacaggtctcctgtggaacttgtcctctgtggacagcctgaagcccgacctgcttaag
agcgctctgcccgtcttaatggagcgcgtgatcctgccgtacacgacgggtcccgaccgg
accggcagccaggaccaggacgaggtcttcttcaacgccaccggctgcctgagaaacctc
agtagcacgaagcaaagcaacagacaggcgctgaggaaatgtcccggtttggtggactct
ctggtcgctcacgttagggagcgcgtggacgcagggacccccgacgacaagtccgtggaa
aactgcgtgtgcaccctgcacaacctgaccttccagctggaggccgaggcgccggctctg
ttcagcaggatcgccgcgttggcccaggacgccaaccggggcccccccggcaaggccgac
gccggccccatcggctgcttcggtccgcagagcaaaccgccgggacacgagcggcgcttt
gacttccccgtggtcgaggatccgcaacccagtggcgccggttggctgatccactccaaa
actatgcagagttacctgtcggtgcttgagaccagccagcgagaagaaacccaggaggcc
tgttgtggagccctgcagaacctcacggcacaagacagcactgtctccagcgtgatgagt
catacgattgtgcagaaactaaatggcctgcgagtgatctgccctcttgtaaaatcagag
aaagtcaacattcagaagagcgcagtggctctgttgggaaacctgaccaaaaacccaaac
ctgaccaatgccatagctcgtaaagccctcccgaatctgctggacgtcctcagcgcaggc
accgagaaaggcaacgagtccgacgacacgctggccatggcctgccagacctccaacggg
ctgctcatgaaccagcccgagatgggcaaacgcctgttgaacaacaagctgatcgactcc
ctgaaggatctcagccagatcggatatttacccaaatccagcaaagcggcagccctgctt
ctccgtaacatgtggtcggaaaaggatttacagagcgccctgaaaaagcaagggatgagc
aaggcctcgtttgtgaacgacatcacggcggcggcgctcaagccgacttga
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