Pseudomonas putida HB3267: B479_20265
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Entry
B479_20265 CDS
T02389
Name
(GenBank) radical SAM protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
ppuh
Pseudomonas putida HB3267
Pathway
ppuh00790
Folate biosynthesis
ppuh01100
Metabolic pathways
Module
ppuh_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
ppuh00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
B479_20265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppuh03016
]
B479_20265
Enzymes [BR:
ppuh01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
B479_20265
Transfer RNA biogenesis [BR:
ppuh03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
B479_20265
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
AGA74945
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Position
complement(4455134..4455781)
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AA seq
215 aa
AA seq
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MQDTLRITEVFYSLQGETRTAGLPTVFVRLTGCPLRCQYCDSAYAFSGGTVRTLDSILEQ
VAGFKPRYVCVTGGEPLAQPNALPLLQRLCDAGYEVSLETSGALDIAGTDTRVSRVVDLK
TPGSEESHRNRYENIEQLTRNDQVKFVICSREDYDWAVSKLIQYNLAERAGEVLFSPSHH
QVNASELADWIVADNLPVRFQLQLHKLLWNDEPGR
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacacattacgcatcaccgaagtcttttactctttgcagggtgaaactcgaacg
gctgggttgcccacggtattcgtgcgcctcaccggttgccccctgcgctgccagtactgt
gacagtgcctatgccttcagtggcggcaccgttcgcaccctcgattcgatccttgagcag
gtcgccggcttcaagccgcgctacgtttgcgtcaccggcggcgagccattggcccagccc
aacgccttgccgctgttgcagcgcctgtgtgacgccggttacgaggtgtcgctggaaacc
agcggcgcgctggatattgccggcaccgacacccgcgtcagccgcgtggtcgacctgaag
accccaggctccgaagagtcgcaccgtaaccgctacgagaacatcgagcagctgacccgc
aacgaccaggtcaagttcgtcatctgttcccgtgaggactatgactgggcggtctccaag
ctgatccagtacaacctggccgagcgtgccggcgaggtgttgttctcgcccagccaccac
caggttaacgccagcgagctggcggactggatcgtcgccgacaacctgcccgtacgcttc
cagctgcagctgcacaagctgctgtggaacgacgaacccggacgttga
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