Pectobacterium punjabense: E2566_06040
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Entry
E2566_06040 CDS
T06530
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
ppuj
Pectobacterium punjabense
Pathway
ppuj01501
beta-Lactam resistance
ppuj01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ppuj00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
E2566_06040
01503 Cationic antimicrobial peptide (CAMP) resistance
E2566_06040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppuj02000
]
E2566_06040
01504 Antimicrobial resistance genes [BR:
ppuj01504
]
E2566_06040
Transporters [BR:
ppuj02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
E2566_06040
Antimicrobial resistance genes [BR:
ppuj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
E2566_06040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QJA19512
LinkDB
All DBs
Position
complement(1332493..1335621)
Genome browser
AA seq
1042 aa
AA seq
DB search
MAKFFIDRPIFAWVLAIMVMLTGLLAIVKLPIAQYPTIAPPAIDVTATYPGADASTLQDS
VTQVIEQNMNGIDNLMYMSSSSDSSGTVQITLTFEAGTDPDIAQVQVQNKLQLAMPLLPQ
EVQQQGVNVQKSSSSFLMVAAFISEDGKMSQEDIADYVAANVKDPISRTSGVGDAQLFGS
QYAMRIWLDPNKLNNYQLTAGDVSAAIRVQNNQIAAGQLGGAPPVPGQQLNASIIAQTRL
NSAEEFSKILLKVNADGSQVRLKDVARVELGAEGYDVIARFNGKPAAGIGIKLATGANAL
DTATAVKEALTKAEEFFPTGLKVVYPYDTTPFVKISINEVVKTLVEAIVLVFLVMYLFLQ
NFRATLIPTIAVPVVLLGTFAILSAFGYSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
AEEGLPPKEATKRSMEQIQGALVGIALVLSAVFVPMAFTGGSTGAIYRQFSITIVSAMVL
SVLVALILTPALCATLLKPIAKGDHSEKTGFFGWFNRVFEKSTHHYTDSVANILRSTGRY
LVIYLLIVVGLALLFLRLPTSFLPDEDQGVLLNIVQLPSGATQENTQKIMDRMTQYYLEN
EKNNVKSVFTVTGFGFSGRGQNAGLAFASLNDWSERSGAENKVMAIAGRANAAFSQYKEA
MVFAVNLPAIIELGTATGFDFQLIDQANLGHAKLTEARNQLLGMAAQRPDTLIQVRPNGM
EDTPQFRLDIDQEKAQALGVSLSDISSTLATTLGGSYVNDFIDRGRVKKVYVQADAPFRM
LPDDIKNWYIRGNNGQMVPFSAFTQSHWEYGSPRLERYNGQPSMQIQGQAAPGKSTGEAM
ALMESFVAQLPQGIGYEWTGMSYQERLSGNQAPAIYAISLIVVFLCLAALYESWSIPFSV
MLVVPLGIVGALIAANMTGLENDVYFKVGLLTTIGLSAKNAILIVEFAKDLMEKEGKGLI
EATLDAIRMRLRPILMTSLAFILGVMPLVISSGAGSGAQNAVGTGVMGGMITATVLAIFF
VPVFFVVVRRRFSKKADDTAAH
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggctaagttttttatagatcgacccatttttgcatgggtactcgccatcatggtgatg
ctgacggggttgctggcaattgttaaattacctattgcccagtatccgacgatcgcaccg
cccgcgattgacgtaacagcaacttatccaggggccgatgcatcaacgctgcaagattcc
gttacacaggttatcgaacagaatatgaacggtatcgacaacctgatgtatatgtcatca
agcagtgactcttccggtacagtccagattacgctgacctttgaggcaggtaccgatcca
gatatcgcgcaggttcaggtgcagaacaaactgcaactggccatgccgctattaccgcag
gaagtacagcagcaaggggttaacgttcagaaatcaagtagtagcttcctcatggttgcc
gccttcatcagtgaagacggtaaaatgtcgcaggaagatatcgctgactacgtggccgct
aacgttaaagaccctatcagtcgtacatccggcgtaggcgacgcgcagctatttggttcc
cagtacgctatgcgtatctggctagatccgaacaagctgaataactatcagttaaccgca
ggtgatgtcagcgcagcaatccgagttcaaaacaaccagatcgccgcagggcaattaggg
ggagcgccacctgttccgggccagcagttgaatgcctcgatcattgctcagactcgcctg
aattcagcagaagaattttctaaaatactgctgaaagttaacgctgatggttctcaggtt
cgccttaaagacgttgcacgcgttgagctgggtgctgaaggctacgacgttatcgcacgt
ttcaatggtaaacccgctgccggtattggtatcaagttggcaacaggcgcgaacgcgctg
gatacggcaacggcagtaaaagaggcactaaccaaagcggaagagttcttccccacaggt
ttgaaagtcgtttacccgtacgatacaacgcccttcgttaagatctccatcaacgaagta
gtgaaaacgctggtggaagctatcgtactggtcttcctggtgatgtacctgttcttgcag
aacttccgtgccacgctgatcccaacaatcgcagtaccagtcgttttgctggggacattt
gctatcctctccgcgtttggctattccataaacaccttgacgatgttcgcgatggttctc
gctatcgggcttctggtggatgacgccatcgtcgtcgtggaaaacgtggaacgtgtcatg
gcagaagaaggtctgccgcctaaagaagcaaccaaacgatccatggagcaaatccaaggg
gcgttggtcggcattgcgctggtattgtccgctgtattcgtcccgatggcgtttaccggt
ggctccacaggggcaatctatcgccagttctccatcacaatcgtttctgcgatggtgctg
tcagttctggttgcgttgattttgacaccagctctttgtgcgaccctgctaaaaccgatc
gccaaaggcgatcacagtgagaaaaccggcttcttcggctggttcaacagagtgtttgag
aagagcacgcatcactacaccgacagcgttgctaatattctgcgtagtaccggtcgttat
ctggttatctatctgttgattgttgtgggtctggcactcttgttcttacgtttgcctacg
tccttcctgccagatgaagaccaaggggttcttctgaacattgttcagttgccttcaggt
gcgacgcaggaaaacacccaaaaaatcatggacagaatgacgcaatattatctcgaaaat
gagaaaaataacgtcaagtctgtgtttacggtcacaggtttcgggttctctggtcgtggg
cagaatgccggtctggctttcgccagtctgaatgactggagtgaacgaagcggcgcagaa
aataaagttatggcgattgcaggccgagcaaacgcagcctttagccagtataaagaagct
atggttttcgcagtcaaccttcctgcgattatcgaactgggtaccgcaacaggtttcgac
ttccagttaattgaccaagccaaccttgggcacgcaaaactgacggaagcacgtaaccaa
ctgctaggtatggcggcacaacgccctgatacgctgatacaagttcgtcctaacgggatg
gaagatacaccgcagttccgtctcgatatcgatcaggaaaaagcacaggcgcttggcgtg
tcgctgtcggatatcagttcaacattggcaaccacgctgggtggttcttatgtaaatgac
tttatcgatcgcggtcgcgtgaagaaagtgtacgttcaggccgatgcgcctttccgtatg
ctgccagatgacatcaaaaactggtacatccgcggtaacaatggacaaatggtgccgttc
tctgccttcacgcagagccactgggaatacggttcaccgcgtctggaacgttataacggc
cagccatcgatgcaaatccaaggtcaagccgcgccaggtaagagtaccggtgaggctatg
gcattgatggaaagtttcgtggcacagttaccgcaaggtatcggctacgaatggacgggg
atgtcttatcaggaacggttgtctggtaaccaggcacctgcaatctatgccatttcattg
attgtcgtgttcctgtgtctggctgcgctttatgaaagctggtcaataccgttctccgtc
atgctggttgttccattggggatcgttggtgcattgattgcggcaaatatgacaggtctt
gaaaacgacgtttactttaaggtgggcctgctgacaaccatagggctatccgcgaagaac
gccatattgatcgtcgaatttgctaaagatctgatggaaaaagaagggaaaggactgata
gaggcaacgctggatgcgattcgtatgcgtttgcgcccaatcctgatgacatcgctggcc
tttatcctcggcgtaatgcctctggtaatcagtagcggtgcaggctccggtgcacaaaat
gccgtcggtactggcgtaatgggcgggatgattacagcaaccgtgctggccatcttcttc
gtccctgtgttctttgttgtggttcgtcgtcgcttcagtaagaaagcagacgatacagca
gcccactaa
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