Pectobacterium punjabense: E2566_21350 Help Entry E2566_21350       CDS       T06530                                  Symbol ligB Name (GenBank) NAD-dependent DNA ligase LigB   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism ppuj  Pectobacterium punjabense Pathway ppuj03030   DNA replication ppuj03410   Base excision repair ppuj03420   Nucleotide excision repair ppuj03430   Mismatch repair Brite KEGG Orthology (KO) [BR:ppuj00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     E2566_21350 (ligB)    03410 Base excision repair     E2566_21350 (ligB)    03420 Nucleotide excision repair     E2566_21350 (ligB)    03430 Mismatch repair     E2566_21350 (ligB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:ppuj03032]     E2566_21350 (ligB)    03400 DNA repair and recombination proteins [BR:ppuj03400]     E2566_21350 (ligB) Enzymes [BR:ppuj01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      E2566_21350 (ligB) DNA replication proteins [BR:ppuj03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      E2566_21350 (ligB) DNA repair and recombination proteins [BR:ppuj03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      E2566_21350 (ligB)    NER (nucleotide excision repair)     GGR (global genome repair) factors      E2566_21350 (ligB)    MMR (mismatch excision repair)     DNA ligase      E2566_21350 (ligB)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       E2566_21350 (ligB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase RNA_ligase Motif Other DBs NCBI-ProteinID:  QJA22276 UniProt:  A0ABX6L7P8 LinkDB All DBs Position complement(4682883..4684574) Genome browser AA seq 563 aa AA seqDB search MWLRIYTFLIICVVGGISGFSAAAEICPDWDNTRSKKEITALRQQLERWDDVYYTEGKSP VADDVYDQLREQLNQWVGCFQPQNVFPVRLPDHGKQLHPVAHTGLKKLSDREQLVHWIAQ RKDLWVQPKVDGVAVTLVYQHGKLVSAVSRGNGIQGEDWTEKVRLIPGIPHLLADAPSSL VLQGELFLKMTDHRQRTQGGVNARSVVAGEMRRHQPSPVLSQIGLFVWEWPDGPKTMPER LKKLQEMGFAMVAEYTHAIGSFADAEKWRHYWYSSPLPFVTDGVVIRQTKEPQGRYWRNT SADWAIAWKYPPVHQVAEVTDVAFSVGRTGKIAVVLKLSPMKLDDKSVSRVNVGSLSRWK QWDVLPGDRVSVSLAGQGISRLDNVVWRGTERPAITPPSEHDFHDFSCFRYSAVCQQQFL ARLVWLSGEHGLNLAGMRDGMWLRLMQHNLLGDVLAWLSLTEAQLNAVNGMGDKRARDIY TSLQSARQKPLSRWLLALGIPVPRSAMSALDHVDWLALQQRTIQQWRQFSGIGERRAEEI MAFLNHPIVVELIARLHREGIPQ NT seq 1692 nt NT seq  +upstreamnt  +downstreamnt atgtggctcaggatttacacttttttgatcatctgcgttgttgggggcatcagtggtttt tcggctgcggccgaaatctgccccgattgggataacacgcgttcgaaaaaagaaattact gcattgcgtcagcagttagaacggtgggatgacgtgtattacaccgaagggaaaagccct gtagcagatgatgtttatgatcaactgagggagcagttaaaccagtgggttggctgcttt cagcctcaaaacgtgtttcctgtccgcctacccgatcatggcaagcagctccatcctgtt gcccatacggggttgaaaaaattgtccgatcgcgagcaattggtgcactggatcgcacag cgtaaggatttatgggttcagccaaaagttgatggtgtggccgtcacactggtctaccag cacggcaagctcgtgtccgcggttagccggggtaatggcattcaaggcgaagactggact gaaaaagttcgtctgattccgggaatccctcatttactagccgatgcaccttcctcgtta gtattacaaggagagcttttcctaaagatgaccgatcatcgacagcgtactcagggtggt gttaatgcacgctcagtcgtggcgggtgaaatgcgtcgtcatcagccatctcccgtgttg tcgcagattggcctgtttgtctgggaatggccggatggcccaaagacgatgcccgaacgt ctgaaaaaattgcaggaaatgggatttgctatggtagcggagtatacccatgccattggg tcattcgccgacgcggagaaatggcgtcactactggtatagcagtcccttgcccttcgtg acggatggcgtggttatccgccagactaaagaaccgcagggacgctattggcgtaacaca tcggccgactgggcgatcgcatggaaatatccgcctgttcatcaggttgcggaagtcacc gatgtggctttttctgtcgggcgtacgggtaagatcgccgtggtgttgaagcttagtcct atgaaattggatgacaaatcggtcagccgggtgaatgtgggctcgctatctcgttggaag caatgggatgtgttgcctggcgatcgggtaagtgtcagcctggcgggacaggggatttcg cgtctggataatgtggtatggcgtgggactgagcggccagctatcaccccacccagtgaa catgatttccatgattttagctgttttcgctatagcgcggtgtgtcagcagcaatttctt gcgcgcttagtttggctaagtggggaacacggtttaaatctggcgggcatgcgtgacggg atgtggttgcgcttgatgcaacataatttactgggggatgtactggcgtggttatctctg accgaagcacagcttaatgccgtcaatggtatgggtgataagcgggcgcgggatatttac acgagcttgcagtcggcacgacagaagccgctatctcgctggctacttgcattgggtatt cctgttccccgctcagcaatgagtgcattggatcatgtggattggctggcgttacagcaa cggacgatacagcagtggcgacagttttcgggtattggagaacggcgtgcagaagaaatt atggcgttcctgaatcaccccatcgttgtggaactcattgcccgattgcatcgcgagggt atacctcaataa

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