Pogoniulus pusillus (red-fronted tinkerbird): 135177517
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Entry
135177517 CDS
T10504
Symbol
THBS1
Name
(RefSeq) thrombospondin-1
KO
K16857
thrombospondin 1
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus04115
p53 signaling pathway
ppus04145
Phagosome
ppus04148
Efferocytosis
ppus04350
TGF-beta signaling pathway
ppus04510
Focal adhesion
ppus04512
ECM-receptor interaction
ppus04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
135177517 (THBS1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135177517 (THBS1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
135177517 (THBS1)
04148 Efferocytosis
135177517 (THBS1)
09143 Cell growth and death
04115 p53 signaling pathway
135177517 (THBS1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
135177517 (THBS1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
135177517 (THBS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppus04131
]
135177517 (THBS1)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ppus00536
]
135177517 (THBS1)
Membrane trafficking [BR:
ppus04131
]
Endocytosis
Phagocytosis
Opsonins
135177517 (THBS1)
Glycosaminoglycan binding proteins [BR:
ppus00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
135177517 (THBS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
EGF_3
cEGF
TSP1_ADAMTS
TSP1_CCN
Laminin_G_3
EGF
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
135177517
NCBI-ProteinID:
XP_064003687
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All DBs
Position
1:complement(31088612..31103041)
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AA seq
1176 aa
AA seq
DB search
MGPAAVLFLLLALGTSEAKRAAESRSDDNSVFDLFELIGFIRKGAGRRAPGVHLVKGPES
SSPAYRIEDAARIPAVPDSKFQDLLDAIHVEKGFILLATLRQAKKSRGTLLSVEQKDGSG
HIFSLVSNGKAGTLDLSLSGDGKQQLISVEDVLLATGHWKNITLFVQEDRAQLYVGCEKM
ENAELDIPIQNIFTRDLASSARLRIAKGGVNDNFQGLLQNVRFVFGTTLETILRNKGCSS
STSATITLDNPINGSSPAIRTNYIGHKTKDIQAVCGFSCDELTNMFVELQGLRSMVTTLQ
DRVRKVTEENELIAKVVQITPGVCIHNGILHKNKEEWTIDSCTECTCQNSATICRKVSCP
LMPCSNATVPDGECCPRCWPSDYADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRCE
GSSVQTRTCHLQECDKRFKQDGGWSHWSPWSSCSVTCGTGIITRIRLCNSPVPQLNGKPC
EGEARENKACQKDPCPINGNWGPWSPWDACTVTCGGGLQKRSRLCNNPEPQYGGKACVGE
ARGTQVCNKQDCPIDGCLSNPCFAGTTCTSSPDGSWKCGACPVGYHGDGIHCQDIDECKE
VPDACFVFNGVHRCENTEPGYNCLPCPPRFTGTQPFGRGVEDAMANKQVCKPRNPCTDGT
HDCNKNAKCNYLGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYHCK
KDNCPNLPNSGQEDYDKDGIGDACDNDDDDDGIPDDRDNCPFIYNPQQYDYDRDDVGDRC
DNCPYNHNPDQTDTDNNGEGDACAVDIDGDGVLNERDNCQYVYNVDQRDTDLDGVGDQCD
NCPLEHNPDQEDTDSDLIGDQCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDAC
DHDDDNDGIPDDKDNCRLVANPDQADSDGDGRGDACKDDFDQDSVPDIDDICPENVEISE
TDFRKFQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSGTFFI
NTERDDDYAGFVFGYQSSSRFYVVMWKQITQSYWDSTPTKAQGYSGLSIKVVNSTTGPGE
HLRNALWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGYIRVVMYEGKKIMAD
SGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDP
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atggggccggcagcggttctcttcctcctcctcgcactcggcacctcggaagctaagcgt
gccgcagagtccaggagtgatgataacagtgtctttgatctctttgaactgattggcttc
attcggaagggagctggccgccgggcacctggggtgcacctggtgaagggaccagaatcc
tccagccctgcttatcgcattgaagatgctgctcgcatccctgctgtccctgactccaag
ttccaagacttactagatgccatccatgtcgagaagggcttcatcctcttggctactctg
cggcaagccaagaagagcagaggcacactgctgtctgtggaacagaaagatggctctggt
cacatcttcagtctagtatcaaatggcaaggcaggcaccctggacctgagcctgtctggt
gatggcaagcagcagctcatctcggtagaggatgtcttgctagctacaggacattggaag
aatatcaccctgtttgtgcaggaggaccgagctcagctctatgtggggtgtgagaaaatg
gagaatgctgaactggacatccccatccagaacatcttcaccagggacctggccagcagt
gccaggctccgtattgccaaagggggagtcaatgacaacttccagggactgctgcagaat
gtgcgatttgtgtttggaacgactctggaaactatcctgaggaacaaaggctgctccagc
tccaccagtgccaccatcacactggacaaccccatcaatggctccagcccagctatccgc
acgaattacatcggccataagaccaaggacatccaggcagtctgtggcttctcctgtgat
gagctgacaaacatgtttgtggagctgcaggggctccgctccatggtcaccacgctgcaa
gacagagtgcgcaaagtgactgaagaaaacgagctcattgccaaagtggtccagatcact
ccaggagtgtgcattcataatggaatcttgcacaaaaataaagaagagtggactattgac
agctgcactgaatgtacctgccagaactcggccaccatatgccgcaaagtgtcctgtcct
ctcatgccctgctccaatgccactgtgcctgatggggagtgctgcccccgatgctggcct
agtgactatgcagatgatggatggtctccctggtccgaatggacttcctgttctgtgacc
tgtggcaatgggattcagcagagggggcgatcctgtgacagcctcaataaccgctgtgag
gggtcttctgtacagacccggacttgccacctgcaggagtgtgataagagatttaaacag
gatggtggctggagtcactggtcaccatggtcatcgtgctctgtcacttgtggcacgggc
atcatcactagaattcgtctctgcaactctccagtaccacagctgaatggcaaaccttgc
gagggtgaggcaagagagaacaaagcttgccagaaagatccttgcccaattaatggcaac
tggggaccatggtctccatgggatgcttgcacagtgacatgtggaggagggcttcagaaa
cgcagccgcctctgcaataatcctgagcctcagtacggtgggaaggcttgtgtgggggaa
gccagagggactcaggtctgcaacaagcaggactgtccaattgatgggtgcctgtcgaac
ccctgctttgcgggcacaacgtgtaccagctcccctgatggctcctggaagtgtggtgcc
tgtcctgttggctaccatggtgatggcatccactgtcaagatattgatgagtgcaaagag
gttcctgatgcctgctttgtcttcaatggagtgcacaggtgtgagaacaccgaacctggc
tacaactgcctgccttgtccgccacgcttcactgggacgcagccctttggccgtggtgtt
gaggatgccatggctaacaaacaggtgtgcaagccacgtaacccatgcacagatggcaca
cacgactgcaacaagaatgccaagtgcaactaccttggccacttcagtgatcccatgtac
cgctgtgagtgcaaaccaggctatgctggcaatggcatcatctgtggagaagacactgac
ctggatgggtggcccaatgagaaccttgtctgtgtggccaatgccacttaccactgtaaa
aaggataactgccctaatctgcccaactctgggcaggaagactatgataaggatgggatt
ggtgatgcctgtgacaatgatgatgacgatgatggaattcctgatgaccgggacaactgt
cccttcatctacaacccccagcagtatgactatgacagggatgacgttggtgaccgctgt
gataactgcccctacaaccacaaccctgaccagactgacactgacaacaatggagaagga
gatgcctgtgcagtggatattgatggagatggtgtcctcaatgaaagggacaactgccag
tatgtctacaatgtagaccagagggacacagacctggatggtgttggagatcagtgtgac
aactgtcctctggaacacaatcctgaccaggaagacacagattctgacctcataggtgat
cagtgtgacaacaaccaggacatcgatgaagatggccatcaaaataaccttgataactgc
ccctatgtgcccaatgccaaccaagctgaccatgataaggatggaaaaggtgatgcctgt
gaccatgacgatgacaacgatggtatccctgatgacaaagacaactgcagattggttgcc
aacccagatcaggctgattcagatggtgatggacgtggagatgcttgtaaagatgacttt
gaccaagacagtgtgccagatattgatgatatctgccctgaaaatgtggagatcagtgag
actgacttccgaaaattccagatgattcccctggatcccaaaggaacatcccaaaatgat
cccaactgggttgttcgccaccagggtaaagaactggttcagacagtcaactgtgaccct
ggccttgcagttggttttgatgaattcaatgctgtagacttcagtggcaccttcttcatc
aatacagagagggatgatgattatgctggctttgtatttggctatcagtccagcagccgc
ttctacgttgtcatgtggaagcagatcacccagtcttactgggactccacaccaaccaaa
gctcaaggctactcaggtctctccatcaaagttgtgaattccaccactggcccaggagaa
caccttcgtaacgctctgtggcacacaggaaacacccctggccaggtgagaaccctgtgg
cacgaccctcggcacatcggctggaaagacttcactgcgtacaggtggcgccttagccac
aggccaaagactggctacatcagggtcgttatgtatgaagggaagaaaatcatggcagac
tcgggacccatctatgacaaaacgtatgctggcgggcggctaggactgtttgtcttctct
caagaaatggtcttcttctcggacctgaaatacgaatgcagagatccatag
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