Pogoniulus pusillus (red-fronted tinkerbird): 135177711
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Entry
135177711 CDS
T10504
Symbol
DHX9
Name
(RefSeq) ATP-dependent RNA helicase A isoform X1
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppus03041
]
135177711 (DHX9)
03012 Translation factors [BR:
ppus03012
]
135177711 (DHX9)
Enzymes [BR:
ppus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
135177711 (DHX9)
5.6.2.6 RNA 3'-5' helicase
135177711 (DHX9)
Spliceosome [BR:
ppus03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
135177711 (DHX9)
Translation factors [BR:
ppus03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
135177711 (DHX9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
HA2_N
DEAD
HA2_C
AAA_19
ResIII
Dicer_dimer
nSTAND3
AAA_14
AAA_22
Motif
Other DBs
NCBI-GeneID:
135177711
NCBI-ProteinID:
XP_064004157
LinkDB
All DBs
Position
8:complement(37802687..37838597)
Genome browser
AA seq
1237 aa
AA seq
DB search
MGDVKNYLYAWCGKRRLMPTYEIRAGGGRNRQTFMCEVRVEGFNYVGMGNSTNKKDAQSN
AARDFVNYLIRVNEMKREEVPSFGPATGDAPDGNEASGDATGSSSSLGGPLPPHLILEAE
IGNGPSTAPGNSGNREAQWDQGANMGDYYVKREDQQVQAASESEPDSNADLHGNWNLDNA
KARLNQYFQKEKIQEEYKYTEMGPDHNRSFIAEMNIYVKQLGRRIFGREHGSNKKLAAQA
CALSLVRQLYHLGVIEPYSGQTKKKGESMEPYDVLVSPELESQLQKTMRELSLETVPMPE
DPSNPVLINVGKLAHFEPSQRQSYMEAVPWSPPHSNWNPWTGCNIDEGPLANLAPEQISM
DLKSDFLYRLEHEEELQRIQEERDSLPVKNFEKEILNAVQHNTVVVIRGATGCGKTTQVP
QYILDEYIRNNRAAECNIVVTQPRRISAVSVAERVAYERGEEPGQSCGYSVRFESVLPRP
HASMLFCTVGVLLRKVEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEIRIILM
SATIDTTMFCEYFFNCPIIEVFGRTYPVQAYFLEDCIQMTKFVPPPKEKKKKDKDEENED
EDANCNLICSDEYGPETKHSMAQLSERETSFELIEALLIYIKTLNVPGAVLVFLPGWNLI
YTMQKHLEMNPRFGNQQYRILPLHSQIPLEEQRRVFDPVPPGVTKVILSTSIAETSITIN
DVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRAGFCFYLCSRARFE
RLQTHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAERTLRDLDALD
SNDELTPLGRILAKLPIEPRLGKMMIMGCIFYVGDAICTISAATCFPEPFINEGKRLGYV
HRNFAGSRFSDHVALLSVFQAWDDARMGGEEAEKRFCEHKRLSMATLRMTWEAKVQLKDI
LISSGFPEECLITQPFNNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEGHSALIH
KSSVNCPFSSQDIKYPSPFFVFGEKIRTRAISAKAMTMVSPLQLLLFASKKVLSDGELIL
VDDWIKLKMPHSAAACITALRAAMEALVVEVTKDPGLIQQLDPANERMLNVIRQLSRPSA
SGLSLLAGTTRFGDGPRPPKMPRYDNGGGYRGWGGSPRGSGYRGRGYGGYGYSGRRPGRG
YQGGPGGGYGGGGGGGGYRGAGGGYQGGSGGPGWGGW
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgggggacgtgaagaactatctgtacgcctggtgcgggaagaggaggctgatgccgacc
tacgagatccgcgccggcggcggccgcaaccggcaaaccttcatgtgcgaggttcgagtg
gaaggcttcaactatgttggcatgggcaattccaccaacaagaaagatgcgcagagcaac
gctgcccgagactttgtcaactacttgattcgtgtgaatgaaatgaagagagaagaagtc
ccttcatttggaccagcaactggtgatgcccctgatggaaatgaagcatccggagatgca
actgggtccagttcttctttaggtggacctcttcctccccacttgattctagaggcagaa
ataggcaatggcccgagtacagcacctggaaactctggcaatcgtgaagctcagtgggat
cagggtgcaaatatgggtgattactatgtcaagagagaggatcaacaagtgcaggcagcc
tcagagtcagaaccagactcaaatgctgatcttcatgggaactggaacttggataatgcc
aaggcacgtctgaaccagtatttccaaaaggagaagattcaggaagaatataaatacact
gaaatggggcctgatcacaacaggagctttattgcagaaatgaacatttatgtgaagcag
ctgggcagaagaatttttggtcgtgagcatggatcaaacaagaagctggcagcccaggcc
tgtgctctgtccttggttagacaactctaccatcttggtgtcatagaaccttactctgga
cagacaaagaaaaaaggagaatcgatggaaccctatgatgtgttggtgtcccctgagtta
gaaagtcagctgcaaaagaccatgcgggagctgtctcttgagactgtgcctatgcctgaa
gatcccagtaatccagttctgattaatgttggaaagttggcccattttgaaccatcgcag
agacagagttatatggaagctgttccgtggtcaccacctcattccaactggaacccttgg
actggctgcaatattgatgagggtcctctggcaaatctcgctccagagcaaatcagcatg
gatttgaaaagtgatttcctgtaccgtttggagcatgaggaggagctacaaagaatccag
gaagagagagactccttacctgtgaagaattttgagaaggaaatcctgaatgcagtccag
cacaacactgttgtcgtcattcgtggcgccaccggttgtggcaaaaccacacaggtgccc
cagtacatcctggatgagtacatcagaaacaacagagctgcagagtgcaacatagtggtg
acacagccccgcaggatcagcgctgtgtctgtagcggagcgtgtggcatacgagagagga
gaagagcctgggcagagctgtgggtacagcgtgcggttcgagtcggtgctgcctcggccc
catgccagcatgctcttctgcaccgtaggtgttcttctgagaaaggtggaggctgggatc
cgtggcattagtcacgttattgttgatgagatccacgagagagacatcaatactgacttt
ctcttggtggtgctgagagatgtagtccaggcataccctgagatcaggattatcctcatg
tctgccaccatcgatactactatgttttgtgaatacttcttcaactgtcctatcattgag
gtctttggtagaacctatcctgtccaagcttattttctggaagattgcattcaaatgact
aagtttgttcctccaccaaaggaaaagaagaagaaagataaagatgaagaaaacgaagat
gaggatgccaattgcaacctcatttgcagtgatgaatatggcccagaaacaaagcactct
atggctcagctgagtgagagagaaacttcttttgaactcattgaggcactgctgatctat
atcaagaccctgaatgttccaggagctgtactcgttttcttgcctggctggaacttgata
tacacaatgcagaagcatctagaaatgaatccacgctttggaaaccagcagtacagaatt
ttacctctgcattctcaaattcccctggaagagcaacgccgagtgtttgatcctgtgcct
cctggagtgacaaaagtgattttatctaccagcattgctgagactagcattaccatcaac
gatgtggtctacgttatagactcctgcaaacagaaagtgaagctgttcactgctcataac
aacatgacaaactatgccacggtctgggcatccaaaactaacctggagcagcggaaggga
agagctggacgcgtgcgtgctgggttttgtttctatttgtgcagcagagctcgctttgaa
agacttcagactcacatgacaccagaaatgtttcggacaccgcttcatgaaattgctttg
agcatcaaattgctgcggctgggaggaattggccagttcttggccaaagcaatagagcca
ccacctttggatgcagtgattgaagcagaacgcacactgagagatcttgatgccctggat
tccaatgatgagctgacacctcttggaaggatcctggccaagcttcccattgaaccccgt
cttggcaagatgatgataatgggctgtatcttttatgtgggagatgctatttgtaccatc
tctgcagccacctgtttccctgaacctttcatcaatgaaggcaagcgcctgggttacgtc
cataggaattttgctgggagcaggttttcagatcacgttgctttgctctctgttttccag
gcctgggatgatgcaagaatgggtggtgaagaagcagaaaaaaggttttgcgagcacaag
aggctcagcatggctaccctgaggatgacttgggaagcaaaagtccagctgaaggatata
cttatcagttctggcttccctgaagaatgcttgataactcagccatttaacaacactgga
ccagataataacctggatgttgtcatctccctgcttgcctttggggtctaccccaacgtc
tgctaccacaaggagaagaggaaaattcttaccactgaggggcacagtgcactcatccac
aagtcttctgtcaactgccctttcagcagccaggacatcaagtatccatcacccttcttt
gtgtttggagagaagatccgaacgcgagccatctctgccaaagcaatgaccatggtgagc
ccgctgcagctgcttctctttgcctccaagaaggtcctgtcagatggggagctcattctg
gtggatgactggatcaagctgaagatgcctcacagtgcagctgcctgcatcactgctctg
cgtgcagcgatggaggctctcgtggtggaagtgactaaagaccctgggctcattcagcag
ctggacccagcgaatgagcgaatgctgaacgtgatccgccagctctccaggccctcagcc
tcaggcctcagcctcttggctggcaccacaaggttcggcgatggtcctcgtccccccaaa
atgcctcgctacgacaacggaggaggctatagaggctggggaggttccccgcgcggctct
ggctacagaggcagagggtatggtggctacggctactctggcaggcgcccgggaagaggc
taccaaggtggcccggggggaggctatggaggaggaggaggaggaggaggctaccgagga
gcgggtggtggctaccaaggaggctccgggggcccggggtggggtgggtggtag
DBGET
integrated database retrieval system
