Pogoniulus pusillus (red-fronted tinkerbird): 135179267
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Entry
135179267 CDS
T10504
Symbol
RFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus00514
Other types of O-glycan biosynthesis
ppus04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
135179267 (RFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
135179267 (RFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ppus01003
]
135179267 (RFNG)
Enzymes [BR:
ppus01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
135179267 (RFNG)
Glycosyltransferases [BR:
ppus01003
]
Glycan extension
O-Glycan
135179267 (RFNG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
135179267
NCBI-ProteinID:
XP_064006920
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All DBs
Position
11:complement(8034720..8044114)
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AA seq
383 aa
AA seq
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MSGSCLGLRKACFLLSVSAAALLLLLLPRGQPPAAPRRRPSPAAGPSGPPQQRAGPGGSG
VHGTRTSSRGEPSGGPGAAAGGRGGGLAGSLQPALKGRVGPAGASARESLELKDIFIAVK
TTRKYHKSRLDLLLQTWISQARGQTFIFTDWEDRELRLKAGDHMINTNCSAVHTRQALCC
KMSVEYDKFLESGQKWFCHVDDDNYVNPRTLLRLLSAFSHSQDVYVGRPSLDHPIEAADH
VQSDGSKTTVKFWFATGGAGFCISRGLALKMSPWASLGNFISTAERVRLPDDCTIGYIIE
GLLEVKLLHSPLFHSHLENLQRLQGESVLQQVTLSYGDPENKHNVVSVGGVFGLQQDPTR
FKSVHCLLYPDTIWCPAKKSRNS
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggtcctgcctggggctccgcaaggcctgcttcctgctgtccgtcagcgccgcc
gccctcctcctcctcctgctgccgcgggggcagccccctgccgcgccccgccgtcgccca
tcgcccgccgcagggcctagtggcccaccgcagcagcgggcgggccccggggggagcggc
gtgcacggcacacggacgagctctcgcggggagccgagcggcgggccgggggccgcggcg
ggcggccgtggcggcggcctcgctggcagcctgcagcctgcgctgaagggccgcgtcggg
ccagccggagcctcggccagggagagtctggagctgaaggacatcttcattgcggtgaag
accacaaggaagtaccacaagagccggctggacttgcttctccaaacctggatttcccag
gcgaggggacagacgtttatattcacagactgggaggatcgggagctgcgcctgaaagca
ggggatcacatgatcaacaccaactgttctgctgtccatacccggcaagctctctgctgc
aagatgtctgtggaatatgataaattcctggaatctgggcaaaaatggttttgccatgtg
gatgatgacaactatgtaaaccctcggactctcctgcgtctcttgtctgccttctcacac
agccaggatgtctatgtggggcgaccaagcctagaccatcccattgaagcagctgaccat
gtccaaagtgatggatcaaagacaaccgtgaaattctggtttgccacaggtggagcaggc
ttctgtatcagcagaggtcttgccctgaagatgagtccctgggccagcctgggtaatttc
atcagcactgcagaaagagtgcgtcttcctgacgactgcaccattggctacatcatcgag
gggctgctggaggtaaagctcctgcacagtcccttgttccattcccacctggaaaacctg
cagagactacaaggcgagtctgtgctgcagcaggtgactctaagttatggggaccctgag
aacaagcacaatgttgtgagtgtgggaggagtgtttggccttcagcaagatccaacacga
tttaaatctgtccattgcctactctatcctgatactatttggtgccctgctaagaagagt
cgtaattcctga
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