Pogoniulus pusillus (red-fronted tinkerbird): 135179969
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Entry
135179969 CDS
T10504
Symbol
TRAF6
Name
(RefSeq) TNF receptor-associated factor 6
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus04010
MAPK signaling pathway
ppus04120
Ubiquitin mediated proteolysis
ppus04140
Autophagy - animal
ppus04144
Endocytosis
ppus04620
Toll-like receptor signaling pathway
ppus04621
NOD-like receptor signaling pathway
ppus04622
RIG-I-like receptor signaling pathway
ppus05132
Salmonella infection
ppus05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135179969 (TRAF6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
135179969 (TRAF6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
135179969 (TRAF6)
04140 Autophagy - animal
135179969 (TRAF6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
135179969 (TRAF6)
04621 NOD-like receptor signaling pathway
135179969 (TRAF6)
04622 RIG-I-like receptor signaling pathway
135179969 (TRAF6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
135179969 (TRAF6)
09171 Infectious disease: bacterial
05132 Salmonella infection
135179969 (TRAF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppus04131
]
135179969 (TRAF6)
04121 Ubiquitin system [BR:
ppus04121
]
135179969 (TRAF6)
Enzymes [BR:
ppus01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135179969 (TRAF6)
Membrane trafficking [BR:
ppus04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
135179969 (TRAF6)
Ubiquitin system [BR:
ppus04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
135179969 (TRAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF6_Z2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-TRAF_2
zf-RING_5
Sina_ZnF
SlyX
RING_XB3-XBAT31
TRAF3_RING
ATG16
zf-RING_11
Med21
CEP104_ZnF
PspA_IM30
CENP-F_leu_zip
U-box
DUF7310
HAP1_N
UPF0242
HMMR_N
DUF1664
DM
DUF16
Motif
Other DBs
NCBI-GeneID:
135179969
NCBI-ProteinID:
XP_064008222
LinkDB
All DBs
Position
1:52571761..52603050
Genome browser
AA seq
544 aa
AA seq
DB search
MSLLYSDSSCGSREAEGGCRAAMASACSAAVKDDSISSTGTANPPSSFTEETQGYDVEFD
PPLESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRDAGHKCPVDNEILLENQLFPDN
FAKREILSLMVKCPNKGCSMKMELRHLEEHQLQCDFSTVECPQCQGAVQKNHLKEHRTQE
CPRRQVCCPNCATSMAYEDKELHDQTCPLANVFCEYCNTVLIREQMPNHYDNDCPTAPVP
CFYSAFGCPEKMQRNELARHMQEFTQVHMRMMAQSFQNISVTAANPVPFINGLPFEPALF
SHVSRAPYECNPDVENFKETIQQLEGRLVRQDHQLRELIAKMETQNTHMAELKRTIRSLE
GKVAELEAQQCNGIYIWKIENFSGLQKAQEEEKPVVMHSPGFYTGKPGYKLCLRLHIQLP
SAQRCANFISLFVHTMQGEYDSHLPWPFQGTIRLSILDQSDGPERQNHEEVMEAKPELLA
FQRPTIHRNPKGFGYVTFMHLQTLKQRTFIKDDTLLVRCEVLTRLDLNSLRREGFQARSA
DGAL
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgctgtacagtgacagcagctgcggaagccgagaggcagagggtggctgccgg
gcagccatggccagcgcctgcagtgctgccgtgaaggacgacagcatcagcagtaccggc
accgccaacccccccagctccttcacagaggagacccaaggctatgatgtggagtttgat
ccccctttggagagcaaatatgaatgtcccatctgcttgatggctctgcgagaggcagtg
cagacaccctgcggacaccgcttctgcaagggctgcatcgtcaagtccataagagatgca
ggtcacaaatgtccagtggataatgaaattctgctggaaaatcaactcttccctgacaat
tttgccaagcgggaaatcctttccttgatggtgaagtgtcccaacaagggctgcagcatg
aagatggagctaaggcatctcgaggagcaccagctgcagtgtgatttctccactgtggaa
tgcccgcagtgccaaggagccgtccagaagaaccatctgaaagagcacaggacgcaggag
tgtccacggcgccaagtctgctgcccaaactgtgccacatctatggcctatgaggacaaa
gagctccatgaccaaacctgccccttggccaatgtgttctgtgaatattgcaacacggtg
ctcatcagagagcagatgcctaaccattatgacaatgactgtcccactgccccagtgccg
tgtttctacagtgcctttgggtgtcctgagaagatgcagaggaatgaactggcacgacac
atgcaggagttcactcaggtccacatgaggatgatggcccagagctttcagaacatcagc
gtcactgctgccaaccccgtgcccttcatcaacggcctgcccttcgagcctgccctcttc
tcacacgtgtcacgtgccccatacgagtgcaatccagatgtggaaaacttcaaagagacc
atccagcagctggaaggtcgcctggtgaggcaagaccaccagctgagagagctgattgct
aagatggagactcagaacactcacatggcagagctgaagcgcaccatccgcagtctggag
gggaaggtggctgagctggaggcccagcagtgcaatgggatttacatctggaagatcgag
aacttcagcggcctgcagaaggcccaggaagaggagaagcctgtggtgatgcacagccct
ggcttctacaccgggaagcctggctacaagctgtgcctgcggctgcacatccagctgccc
agcgcccagcgctgcgccaacttcatctcgctgttcgtgcacaccatgcagggggagtac
gacagccacctgccctggcccttccagggcaccatccgcctctccatcctcgaccagtcg
gacggccccgagcggcagaaccacgaagaagtgatggaagccaagccagagctgttggcc
ttccagaggccgacgattcaccgcaaccccaaaggcttcggctacgtcaccttcatgcac
ctgcagaccctgaagcagagaaccttcatcaaggacgacaccctcctggtgcgctgcgag
gtcctcacgcggctggacctcaacagtctgcgcagagaaggcttccaggctcgcagtgct
gatggagccctgtag
DBGET
integrated database retrieval system
