KEGG   Pogoniulus pusillus (red-fronted tinkerbird): 135179969
Entry
135179969         CDS       T10504                                 
Symbol
TRAF6
Name
(RefSeq) TNF receptor-associated factor 6
  KO
K03175  TNF receptor-associated factor 6 [EC:2.3.2.27]
Organism
ppus  Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus04010  MAPK signaling pathway
ppus04120  Ubiquitin mediated proteolysis
ppus04140  Autophagy - animal
ppus04144  Endocytosis
ppus04620  Toll-like receptor signaling pathway
ppus04621  NOD-like receptor signaling pathway
ppus04622  RIG-I-like receptor signaling pathway
ppus05132  Salmonella infection
ppus05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ppus00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    135179969 (TRAF6)
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    135179969 (TRAF6)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    135179969 (TRAF6)
   04140 Autophagy - animal
    135179969 (TRAF6)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    135179969 (TRAF6)
   04621 NOD-like receptor signaling pathway
    135179969 (TRAF6)
   04622 RIG-I-like receptor signaling pathway
    135179969 (TRAF6)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    135179969 (TRAF6)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    135179969 (TRAF6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ppus04131]
    135179969 (TRAF6)
   04121 Ubiquitin system [BR:ppus04121]
    135179969 (TRAF6)
Enzymes [BR:ppus01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     135179969 (TRAF6)
Membrane trafficking [BR:ppus04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    135179969 (TRAF6)
Ubiquitin system [BR:ppus04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    135179969 (TRAF6)
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-TRAF_2 zf-RING_5 Sina_ZnF SlyX RING_XB3-XBAT31 TRAF3_RING ATG16 zf-RING_11 Med21 CEP104_ZnF PspA_IM30 CENP-F_leu_zip U-box DUF7310 HAP1_N UPF0242 HMMR_N DUF1664 DM DUF16
Other DBs
NCBI-GeneID: 135179969
NCBI-ProteinID: XP_064008222
LinkDB
Position
1:52571761..52603050
AA seq 544 aa
MSLLYSDSSCGSREAEGGCRAAMASACSAAVKDDSISSTGTANPPSSFTEETQGYDVEFD
PPLESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRDAGHKCPVDNEILLENQLFPDN
FAKREILSLMVKCPNKGCSMKMELRHLEEHQLQCDFSTVECPQCQGAVQKNHLKEHRTQE
CPRRQVCCPNCATSMAYEDKELHDQTCPLANVFCEYCNTVLIREQMPNHYDNDCPTAPVP
CFYSAFGCPEKMQRNELARHMQEFTQVHMRMMAQSFQNISVTAANPVPFINGLPFEPALF
SHVSRAPYECNPDVENFKETIQQLEGRLVRQDHQLRELIAKMETQNTHMAELKRTIRSLE
GKVAELEAQQCNGIYIWKIENFSGLQKAQEEEKPVVMHSPGFYTGKPGYKLCLRLHIQLP
SAQRCANFISLFVHTMQGEYDSHLPWPFQGTIRLSILDQSDGPERQNHEEVMEAKPELLA
FQRPTIHRNPKGFGYVTFMHLQTLKQRTFIKDDTLLVRCEVLTRLDLNSLRREGFQARSA
DGAL
NT seq 1635 nt   +upstreamnt  +downstreamnt
atgagcttgctgtacagtgacagcagctgcggaagccgagaggcagagggtggctgccgg
gcagccatggccagcgcctgcagtgctgccgtgaaggacgacagcatcagcagtaccggc
accgccaacccccccagctccttcacagaggagacccaaggctatgatgtggagtttgat
ccccctttggagagcaaatatgaatgtcccatctgcttgatggctctgcgagaggcagtg
cagacaccctgcggacaccgcttctgcaagggctgcatcgtcaagtccataagagatgca
ggtcacaaatgtccagtggataatgaaattctgctggaaaatcaactcttccctgacaat
tttgccaagcgggaaatcctttccttgatggtgaagtgtcccaacaagggctgcagcatg
aagatggagctaaggcatctcgaggagcaccagctgcagtgtgatttctccactgtggaa
tgcccgcagtgccaaggagccgtccagaagaaccatctgaaagagcacaggacgcaggag
tgtccacggcgccaagtctgctgcccaaactgtgccacatctatggcctatgaggacaaa
gagctccatgaccaaacctgccccttggccaatgtgttctgtgaatattgcaacacggtg
ctcatcagagagcagatgcctaaccattatgacaatgactgtcccactgccccagtgccg
tgtttctacagtgcctttgggtgtcctgagaagatgcagaggaatgaactggcacgacac
atgcaggagttcactcaggtccacatgaggatgatggcccagagctttcagaacatcagc
gtcactgctgccaaccccgtgcccttcatcaacggcctgcccttcgagcctgccctcttc
tcacacgtgtcacgtgccccatacgagtgcaatccagatgtggaaaacttcaaagagacc
atccagcagctggaaggtcgcctggtgaggcaagaccaccagctgagagagctgattgct
aagatggagactcagaacactcacatggcagagctgaagcgcaccatccgcagtctggag
gggaaggtggctgagctggaggcccagcagtgcaatgggatttacatctggaagatcgag
aacttcagcggcctgcagaaggcccaggaagaggagaagcctgtggtgatgcacagccct
ggcttctacaccgggaagcctggctacaagctgtgcctgcggctgcacatccagctgccc
agcgcccagcgctgcgccaacttcatctcgctgttcgtgcacaccatgcagggggagtac
gacagccacctgccctggcccttccagggcaccatccgcctctccatcctcgaccagtcg
gacggccccgagcggcagaaccacgaagaagtgatggaagccaagccagagctgttggcc
ttccagaggccgacgattcaccgcaaccccaaaggcttcggctacgtcaccttcatgcac
ctgcagaccctgaagcagagaaccttcatcaaggacgacaccctcctggtgcgctgcgag
gtcctcacgcggctggacctcaacagtctgcgcagagaaggcttccaggctcgcagtgct
gatggagccctgtag

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