Pogoniulus pusillus (red-fronted tinkerbird): 135181925
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Entry
135181925 CDS
T10504
Symbol
TDG
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
135181925 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppus03400
]
135181925 (TDG)
Enzymes [BR:
ppus01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
135181925 (TDG)
DNA repair and recombination proteins [BR:
ppus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
135181925 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
135181925
NCBI-ProteinID:
XP_064011505
LinkDB
All DBs
Position
15:complement(13355025..13368591)
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AA seq
360 aa
AA seq
DB search
MMTAAPNMEIMTEQPTLEGIPEPNVVQEPPKEVKKGGRKRKAKATEPKQPKKPAAKKEKS
AKSKGKQEKITDTFKVKRKVDRFNGVSEAELLTKTLPDILTFDLDIVIIGINPGLMAAYK
GHHYPGPGNHFWKCLFMSGLSNEQLNHMDDHTLPHKYGIGFTNMVERTTPGSKDLSSKEF
REGGRILMQKLQKYKPRIAVFNGKCIYEIFSKEVFGIKVKNLEFGLQPHKVPDTETLCYV
MPSSSARCAQFPRAQDKVHYYIKLKDLRDQLKGITPNTEVQEVQYTFDLQLAQEDAKKMA
VKEEKYDPGYEAAYGGAYCDRTPYGSEPCNFSSNGTGKVQCLGHCLQTITRRYSVLSTAC
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgatgactgcagcacctaacatggaaatcatgacagagcagccgactctagagggcatt
ccagagccaaacgttgttcaggagcctccaaaagaagttaaaaaaggaggaagaaaaaga
aaagccaaagcaaccgagccaaagcaacccaaaaagcctgctgctaaaaaagaaaagtcg
gccaagtcaaaaggcaaacaagaaaagatcacagatacttttaaagtcaaacggaaagtg
gatcgttttaatggcgtgtctgaagctgaacttctgaccaagactttacctgatattttg
acctttgatctggacatcgtgataattggcataaatcctggcttgatggcagcttacaaa
ggacatcattaccctggacctggaaaccatttttggaaatgtctgttcatgtctggccta
agtaacgagcagctgaaccatatggatgaccacaccttgccacataaatatgggattgga
tttacaaacatggttgaaaggacaacacctggaagcaaagacctctccagcaaagagttt
cgggaaggagggcgaatcctgatgcagaagttacagaagtataaacctcgtatagcagtt
ttcaatggaaaatgtatttatgaaatttttagtaaagaagtttttggtataaaagttaag
aacttggaatttgggctgcagccacacaaggtgccagatactgaaactctctgctacgtt
atgccatcatccagtgcaagatgtgctcagtttcctcgtgcacaagataaagttcattat
tacataaagctgaaagatttaagggatcaactgaaaggcatcacaccaaacacagaggtg
caggaggtgcagtacacgtttgacttacaacttgcacaagaggatgctaaaaagatggct
gtcaaagaagaaaaatatgatcccggttatgaagcagcatatgggggagcttactgtgat
cgcacgccgtatggaagcgaaccgtgcaacttctcttcaaatggaaccggtaaagtgcag
tgcctggggcattgtctgcaaaccatcactcgcaggtattcagtgctgtcaactgcatgt
taa
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