Pogoniulus pusillus (red-fronted tinkerbird): 135188956
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Entry
135188956 CDS
T10504
Symbol
TRAF3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus04620
Toll-like receptor signaling pathway
ppus04621
NOD-like receptor signaling pathway
ppus04622
RIG-I-like receptor signaling pathway
ppus05164
Influenza A
ppus05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
135188956 (TRAF3)
04621 NOD-like receptor signaling pathway
135188956 (TRAF3)
04622 RIG-I-like receptor signaling pathway
135188956 (TRAF3)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
135188956 (TRAF3)
05168 Herpes simplex virus 1 infection
135188956 (TRAF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF3_RING
zf-TRAF
zf-C3HC4
Cast
MPS2
ATG16
zf-C3HC4_2
Med28
FliJ
Spc29
Sina_ZnF
zf-RING_UBOX
KxDL
Tropomyosin
GAS
zf-RING_6
DUF1664
SPATA24
Crescentin
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
135188956
NCBI-ProteinID:
XP_064024913
LinkDB
All DBs
Position
1:complement(11591597..11670750)
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AA seq
567 aa
AA seq
DB search
MDTSKKTEPPLSVEMVQQRANPDRSPSASIYVPEQGGYKEKFVNAVEDKYKCEKCHLILC
NPKQTECGHRFCETCMNALLSSSSPKCTACQESIVKDKVFKDNCCRRELLALQIYCRNEN
KGCKEQLSLGQLLLHLKTDCQFEELPCPRADCKEKILRKDLPDHVEKTCKYRETTCKYCK
SQVPMIMLQKHEDTDCPCVMVSCPHKCSVKTLMRSELNAHLSECINAPSTCSFKRYGCTF
QGTNQQIKAHEASSAVQHVNLLKEWSNALENKVALLQNESLEKNKSIQTLHNQICSFEIE
IERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRV
TELESVDKTAGQGARNTSLLETQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWK
IRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGE
YDALLPWPFKQKVTLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQT
VLENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggacaccagtaagaagacagaacctcctttatctgtagaaatggtacaacaaagggca
aatcctgatcgcagtccttcagcatcaatttatgttccagaacaaggtggctacaaagag
aaatttgtaaatgctgtggaagataagtacaaatgtgaaaaatgtcaccttatcttatgc
aatcctaagcagactgagtgtggacacagattttgtgagacctgcatgaatgccttgcta
agttcttctagtccaaaatgtacagcgtgtcaagaaagcatagtaaaagataaggtgttt
aaagacaattgttgcaggagagagctacttgcccttcagatatactgcagaaatgaaaac
aagggctgtaaagagcagctatctttgggtcagttactgctgcatttgaaaactgattgt
cagtttgaagaactcccatgtcctcgtgctgattgcaaagaaaaaatactgagaaaagat
ttgccagaccacgtagaaaagacctgcaaataccgggagacaacctgtaaatactgtaaa
agccaagtcccaatgattatgttgcagaaacacgaagatacagactgcccgtgtgtcatg
gtttcatgtcctcataaatgtagtgttaaaacactcatgaggagcgagttgaatgcacat
ttgtcagaatgtattaatgccccaagtacctgtagttttaagcgttatggctgcactttt
cagggaacaaatcaacaaattaaagcacatgaagccagctcagcagtgcagcatgttaac
ttattgaaagagtggagcaatgctttagaaaataaggtggccttgctccagaatgaaagt
ttggaaaagaacaagagtatacaaactttacataatcagatttgtagctttgaaatagaa
attgaaagacagaaggaaatgctgcggaataatgaatctaaaatacttcatttacagcga
gtaatagacagtcaagcagagaaactgaaagaactggacaaagaaatccgtcccttccga
caaaactgggaggaggctgacagcatgaagagcagtgtagaatccctccagaacagagtg
actgagctggaaagcgttgataaaactgcagggcaaggagctcgaaatacaagcctgcta
gagacacagctgagcagacatgaccagatgctgagcgttcatgacattcggctggccgac
atggacctccgattccaggttttagaaactgccagttacaatggagtattgatttggaaa
atccgagattataaacgtcggaagcaagaggcagtcatggggaagaccctgtccttgtac
agccaacccttttacaccggctacttcggctacaagatgtgtgccagagtttaccttaac
ggagacggcatgggaaaggggacgcacttgtcgctgttctttgtcataatgcgtggagaa
tacgacgcgttgctcccctggcccttcaaacagaaagtgactctcatgctgatggatcag
ggaccgtctcggcgccacttaggagatgctttcaagccagatccaaacagcagcagcttc
aagaaaccgactggagaaatgaacattgcgtctggctgcccggtctttgtggctcaaact
gtcctagagaatggaacgtatattaaagatgatactatttttattaaagtcatagtggat
acgtcggatctaccagacccctga
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