KEGG   Pogoniulus pusillus (red-fronted tinkerbird): 135191614
Entry
135191614         CDS       T10504                                 
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
  KO
K10605  breast cancer type 1 susceptibility protein [EC:2.3.2.27]
Organism
ppus  Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03440  Homologous recombination
ppus03460  Fanconi anemia pathway
ppus04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ppus00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    135191614 (BRCA1)
  09124 Replication and repair
   03440 Homologous recombination
    135191614 (BRCA1)
   03460 Fanconi anemia pathway
    135191614 (BRCA1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ppus01009]
    135191614 (BRCA1)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ppus04121]
    135191614 (BRCA1)
   03036 Chromosome and associated proteins [BR:ppus03036]
    135191614 (BRCA1)
   03400 DNA repair and recombination proteins [BR:ppus03400]
    135191614 (BRCA1)
Enzymes [BR:ppus01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     135191614 (BRCA1)
Protein phosphatases and associated proteins [BR:ppus01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     135191614 (BRCA1)
Ubiquitin system [BR:ppus04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    135191614 (BRCA1)
  Multi subunit type E3
   BRCC complex
    135191614 (BRCA1)
Chromosome and associated proteins [BR:ppus03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     135191614 (BRCA1)
DNA repair and recombination proteins [BR:ppus03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-core complex
     135191614 (BRCA1)
    BRCA1-A complex
     135191614 (BRCA1)
    BRCA1-B complex
     135191614 (BRCA1)
    BRCA1-C complex
     135191614 (BRCA1)
    BRCA complex
     135191614 (BRCA1)
   FA (Fanconi anemia) pathway
    Downstream FA components
     135191614 (BRCA1)
SSDB
Motif
Pfam: BRCT_assoc BRCT zf-C3HC4 zf-C3HC4_4 zf-RING_UBOX zf-C3HC4_2 BRCT_2 zf-RING_2 RING_XB3-XBAT31 zf-RING_6 zf-C3HC4_3 BRCT_3 zf-RING_5 zf-RING_10 zf-Nse Prok-RING_4 MMS21_N RTT107_BRCT_5
Other DBs
NCBI-GeneID: 135191614
NCBI-ProteinID: XP_064030144
LinkDB
Position
40:complement(3832715..3852721)
AA seq 1734 aa
MDLSAMAVGDVQSVLLAMQKNLECAICLDVVKEPVSTKCDHIFCRLCMFKLFSEKKKGVV
ECPLCKTEVTKRSLRENSRFKQLIGVLLETIHAFELDTGVKILNSHHLPKTSTEATADLL
CEKHSVIQSKGFRNRKKSTKGNGQETCTLQEANVDTQLADTKDKQCPLRNKTQRCDSEKG
IYIEFGSDSSEELFKQQSNARSEDKTGLHISSQQQKSAKEGKGCCLNAQSDKLSAKGGIL
PNVPGESDFSKEGLSKRSTLSTTEYAKPVQTNVTGCQSSALNASVELLREQCDGTGPGSA
SKSRDTSFLENTEAHAEQTQCSSKRKEIDLKDSSESRLDESKDVDTVVQIVEAVEMHKPE
NDSFHENELTLEKLLQPETLHCTALPEVSRKRLKRSVEKVNEWFSKSNEILTSSSSQDYS
AGAAVSDEEDMCLSDKDSSTSEKTDPMEITVEEGNKGSRPMADIIKDKIFGKTYKRERKA
NPPVIWRDVFPSAKQKDVGAAAEKCLDDSSKDRPKRKRKTAHVLQPEDFIKQKDKEGTDG
SPQSVNCCFGGAEEKRCDESSAVNESHLSENREDNTLAALEEGGGSIRKKATAKVTGRQS
DSELELKNCDQKSTKKTTAAKRCRSSTRAMCALQLVVDRNSPSPDPAEPQIDSYPSSEEA
RKVDSEQRQVRRSRRLQLLSGEMTKEMGKGAVMKRARTSGSDDEEPFGDRSNVLAHTSEC
KDLSEPPGVLSHKLLTDQKADNMQVSLQNSPDTAAAGMSLFNSPALCQHSDCSSSAPDAG
SHGGKIQGSPFLLQSPSVTVVQTSDPAEEVTESSVPQESEHDMQSVTEDLGTEKLPVARK
AWDLIKEAADSELDTQCLRGIFRHSKRLSFSLCPAPPKVCAEGAAAEPLKVSCAAQVENE
HSKHLNKENLQEEETVESLSRVGEEEELKTYESGCVSPVNCFVGNTECMDTVEHEAGVSQ
VANQETLTPVRVSAAGIEDKNTLQKGEQGDEKTVSAAVGIGGELRQNPVSTSRQSDQSDT
AELAFRAGVNTVSEICLASGSNQAQKAEVVDSKGPVLHLLSRSMISAAPEQRPAEFRGEI
TENKGSKRKKRQVKGTGEEATQTDGTGMPKCLVPEAAEEPLEETGGFTGLSEAADDLLCS
DDVSEGNSFSETDRREVSAVFVKRGGEALTKELHNRNAGSRPRSQGTQRSRRRVPKLPSS
DEESSEDEDLPCFQTLMFGKSVSTPLQVNKQVASGAECPLSPITSPRDGSHDVSDMQKVP
EAAPSNEYPSLSQESECSINLFSSQSNNSEESTDGAKEPKKLSAQADRSKQVKNVSESKE
ESQCCNGRLKRSKTNFKDECQEDPNVGANLASGYDSEASNVEDSCGPFSQGEILTTQQKN
AMQNNLKKLQQEMAVLEAVLQQHGSQDPEFSPVHRELPQSSSKGTIGVEQRTQERKNADE
QKSGTRLNSPSVLSNLPEDVTRGESNSPSSVKPLHPGTAEAAESPAAAQDAKQSCAQEGE
SNSRVSLPLPVLHGATGKESAAVTNRKAMSLVASGLDQSERLMVQKFARKTWSTLSNHVT
EGTTHVIMKTDNELVCERTLKYFLGIAGRKWVVSYQWVIQSFKEGRILDEENFEVRGDVI
NGRNHQGPKRARESLTEKIFKDFEICCCGPFTGMTTEHLEWMVELCGASVVKQLHLFTHT
TGSAVVVVQPDAWTGTTDYRAIQQKNNVAMVTREWVLDSVACYECQELDAYLMS
NT seq 5205 nt   +upstreamnt  +downstreamnt
atggacctctcagccatggctgttggagatgtacaaagtgtgctcttggctatgcagaag
aatctggagtgtgcaatatgcttggatgtggtcaaagagccagtttcaacaaaatgtgat
catatcttctgcaggttatgcatgttcaaactcttcagtgaaaagaaaaaaggtgtggta
gagtgtcctctgtgcaagactgaagttactaagagaagtctgagagaaaattccagattt
aagcaactaattggggtgttgttggaaactatccatgcatttgagcttgacactggagta
aagattttaaacagtcatcaccttcctaaaacgtccacagaagccactgctgatttgctg
tgtgaaaagcattctgttatccaaagcaagggcttcagaaacaggaaaaaaagcaccaaa
ggaaatggacaagagacctgcaccttgcaggaagccaatgtggatacacagcttgcagac
actaaggacaaacagtgtcccctaagaaacaaaacccagaggtgtgactctgaaaaaggg
atttatatcgagtttggctctgactcatctgaagagctttttaaacagcaaagcaatgcc
agatcagaagacaaaacagggcttcacatttcttctcaacaacagaagagtgctaaggag
gggaaaggctgttgtctcaatgcacagtctgataagttaagtgctaaaggaggaattcta
ccaaatgtcccaggtgaaagtgatttctctaaggaaggcttgagcaagagaagtactctg
agcaccactgaatatgccaaacctgtccaaacaaatgtgactggatgccagagttctgct
ttaaatgcatctgtagagctgctcagagagcagtgtgatggaacgggtcctggcagcgct
tcaaagagcagggacacatctttcctggagaacacagaagcccatgcagagcaaactcag
tgcagcagtaaaagaaaagagattgacttaaaagatagttcagagagcaggttggatgaa
agcaaggatgtagatactgttgtacaaattgtggaagctgtggaaatgcacaaacctgag
aatgattctttccatgaaaatgagcttactctggagaaactgcttcagccagagacactt
cactgcactgccctgcctgaagtctctaggaagagactgaagagaagtgttgaaaaagtc
aatgagtggttttcaaaaagcaatgagattctgacttccagttcttcccaggactattct
gctggagcagcggtttcagacgaagaagatatgtgcttgtctgacaaagattcctctact
tcagagaagactgacccgatggaaatcacagtggaggaaggaaacaaagggtcaagacca
atggcagatatcatcaaagacaaaatatttgggaaaacatacaagagagagaggaaggca
aatccccctgttatctggagggatgtttttcctagtgcaaaacagaaagatgtgggtgct
gctgctgagaagtgcttggatgactccagcaaagacagacccaaacgaaaaaggaagact
gcccatgtcctgcagcctgaggatttcatcaagcaaaaagataaagaagggacagatggg
agccctcagagtgttaactgctgctttggaggtgctgaagagaaaagatgtgatgaaagt
tctgctgttaatgagagtcacctctctgagaacagagaggataatacactggcagcactt
gaggaaggaggaggatccatacggaagaaagctactgcaaaggtgactggcaggcagagt
gacagtgagctagaactgaaaaactgtgaccagaaaagcactaaaaaaaccactgcagca
aaaagatgcaggagttctactagagccatgtgtgctctccagttggtggtggacaggaac
tctccttcccctgatccagcagagccacagattgacagctacccaagcagtgaagaagca
aggaaagttgattctgagcaaagacaagtcaggcgcagcaggaggcttcagttactgtct
ggagaaatgacaaaagaaatgggaaaaggagcagtaatgaagagagcaagaacctctggc
agcgatgatgaagagccttttggagaccgaagcaatgtgctagctcacacttctgaatgc
aaagacctgagtgagcccccgggtgtgctgagtcacaagctactcactgatcagaaggct
gataacatgcaggttagcctacagaattcacctgatactgcagcagctggaatgagtctc
ttcaattctccagccttgtgtcagcattcagactgtagttcctctgcacctgatgcaggt
tctcatggaggtaaaatacaaggtagccctttcctcttacagtctccctcagtgactgtt
gtgcaaacttctgacccagctgaagaggtgactgaatcaagtgttccccaggagagtgaa
catgatatgcaaagtgtaacagaggacttgggaactgaaaagctgccagtggccagaaaa
gcctgggatttgattaaggaagctgcagatagtgagttagacacacagtgcctgcgaggt
atatttaggcattccaaacgcctgtcgttcagcctttgtcctgctcccccgaaggtgtgt
gcagaaggggctgctgctgagcctctgaaggtatcgtgtgctgctcaggtagaaaatgag
catagtaaacatttaaacaaagaaaacttgcaagaagaggaaactgttgaaagcttgagt
agggttggtgaggaagaggagcttaagacctatgaatctggttgtgttagtcctgtgaat
tgctttgttggcaacactgaatgtatggacacagtggaacatgaagcaggtgtttcacag
gttgcaaatcaagagacactgacacctgtaagagtgagtgctgctgggattgaagacaag
aacacattgcaaaagggagagcagggagatgaaaagacagtgtcagctgctgtagggata
ggaggtgagttgaggcagaatccagtcagtaccagcagacagagtgatcagagcgataca
gcagagctcgctttcagagctggtgtaaacacagtcagtgagatctgcttggcttcagga
agcaatcaagcacaaaaggctgaagttgttgacagcaaaggcccagtgctccatcttctg
tccagatcaatgatttctgcagctcctgagcagaggcctgctgaattcaggggtgaaatc
actgaaaacaaaggtagcaaaaggaaaaaaaggcaagtgaaggggaccggagaagaggca
acccaaacagatggcacaggaatgcccaagtgcttagttccagaggctgcagaggaaccc
ctggaagagactggtggttttacaggtttatctgaagctgctgatgacttactgtgctct
gatgatgtttctgaagggaacagcttttctgaaactgataggagagaggtatctgctgtc
tttgtgaaaagaggcggcgaggccctgacgaaggaactgcacaacagaaatgctggttcg
aggcccagatctcagggtactcagagatctcgaagaagagtgccaaaactgccatcttca
gatgaagaatccagcgaggatgaagacttaccctgctttcagacattaatgtttggcaaa
tcagtaagcacacctttgcaggtcaataaacaggtggcatctggggcggagtgtccacta
agtcccatcacgtcgcctcgcgatggaagccacgatgtgagtgacatgcagaaagtgcct
gaagctgccccaagtaatgagtatccttcattaagccaggagtcagaatgctccatcaac
ttattttcttcccagtccaataattctgaagaatcaactgatggagcaaaagagccaaag
aaactttcagcacaagctgatagatcaaaacaagtgaagaacgtgagtgagagtaaagaa
gaatctcaatgttgcaatgggaggctgaagagaagcaaaacaaacttcaaagatgaatgt
caagaagacccaaacgtgggagcaaacctagcatctggatatgacagtgaagcaagtaac
gtagaagattcatgtggacctttctcccagggtgaaatccttactacacagcagaagaat
gctatgcaaaataacctgaaaaagcttcagcaagaaatggctgtacttgaagcagtgcta
cagcagcatggaagccaggaccctgagttttcacctgtgcacagggaactgccacagtcc
agtagtaaaggaacgattggagtggaacaaaggacacaagaaagaaaaaatgcagatgag
cagaaatctgggaccaggctcaacagtccatctgttctatcaaatctccctgaagatgtg
accaggggtgagagtaactcaccatcctctgtgaagccgcttcaccctggcactgcagaa
gcagcagagagtcctgctgcagctcaggatgccaagcaaagctgtgcacaggagggtgaa
tcaaacagcagggtgtcgcttcctctgcctgttctgcacggtgcaactggaaaggagagt
gcagctgtgaccaacaggaaagcaatgtccttggtggcctcgggtctggaccaaagtgaa
cgtttgatggtccaaaagtttgcaagaaaaacttggagcactttatctaatcatgttact
gaaggaaccacccacgtcataatgaaaacagataacgagctggtgtgtgagaggacactg
aagtatttcctgggcattgcaggaaggaaatgggtcgttagctaccagtgggtgattcag
tcttttaaagaaggaaggatactggatgaggagaacttcgaagttagaggagatgtaatc
aacgggagaaaccaccaaggtcctaagagggctagagaatctctaactgagaagatcttt
aaagactttgagatctgttgctgtggacctttcactgggatgaccacagaacatctggaa
tggatggtggagctttgtggtgcctctgttgtgaagcagcttcatctgttcacacacaca
acaggctctgctgttgtggttgtgcagccagacgcttggacgggaaccacggattacaga
gccatccagcaaaagaacaacgttgccatggtgactcgagagtgggtgttggacagcgtt
gcttgctatgagtgccaggagttggatgcttaccttatgtcctga

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