Pogoniulus pusillus (red-fronted tinkerbird): 135191942
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Entry
135191942 CDS
T10504
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ppus04040
]
135191942 (SCN4A)
Ion channels [BR:
ppus04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
135191942 (SCN4A)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
GPHH
Motif
Other DBs
NCBI-GeneID:
135191942
NCBI-ProteinID:
XP_064030739
LinkDB
All DBs
Position
40:5826091..5894551
Genome browser
AA seq
1854 aa
AA seq
DB search
MAAGLPCIPGPQNLRPFTPASLEAIERRMAEAEALRIKRQQVEMPEEEEIKPSSDLEAGK
NLPLIYGDPPLELIGTPLEDLDPFYKDKKTFIVLNKGKAIFRFSATPALYLLGPFHPIRR
GAIKVLIHSFKLFSMFIMITILTNCVFMTLSNPPAWSKNVEYTFTGIYTFESLIKVLSRG
FCIDDFTFLRDPWNWLDFMVISMAYITEFVDLGNISALRTFRVLRALKTITVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVRWPPFNDSLLGLDNSSWPN
TTFLLGLGNGSWPNATSYGSFAGGSGANFTEDVAGNFTSNFTSNSTFDFEAYINDEANFY
FLDGALDALLCGNSSDAGKCPEGFQCMKAGRNPNYGYTSYDTFSWAFLALFRLMTQDFWE
NLFQLTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYAEQNDATMLEEQQKEEEFQ
QLMEQLKKQQEEEERRLQERTSSSSSLPSSVAEKEHDSDPSSDQDKAKDCNGQVIPKIKL
ERSATVVDFNPTYEPEKSDHNHLAVGNQDGPGLEKRVGSAISVISNAVEELEEAHQKCPP
WWYKFAHTFLVWNCCPPWVKLKEFVKMVVMDPFVDLGITICIVLNTVFMAMEHYPMTEEF
ENVLTVGNLVFTGIFTAEMVLKLIALDPYEYFQQGWNVFDSIIVTLSLVELGLANVQGLS
VLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSY
LDCVCKISLDCTLPRWHMNDFFHSFLIVFRILCGEWIETMWDCMEVAGQTMCLIVFMMVM
VIGNLVVLNLFLALLLSSFSADSLAASDDDGELNNLQIAIGRITRGIDFAKASLLSLLHG
LWKGKKVAPEDEQEPSKADNSVLNHVDSSQEPKAEYLDGVAGKEHFFTDELDHMNFINNP
SLTLQVPIASEESDLYEETSTQSDTEDAKNPLSSDNASSLCSTVDYKPPQPEEEEVAEEA
EESNEPEECFTEGCVKRFPCLYVDISSERGRLWWNLRRTCFRIVEHDWFETFIVFMILLS
SGALAFEDIYIEQQKVIRTILEYADKVFSYIFVLEMLLKWVAYGFKVYFTNAWCWLDFLI
VDVSLVSLTANWLGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVL
LVCLIFWLIFSIMGVNLFAGKYYRCVNTTTGELFDISLVNNKSDCMALLHTNEVRWLNVK
VNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSREIEEQPSYEINLYMYIYFVVFIIFGAF
FTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPSNKVQG
MVFDFVTKQVFDITIMILICLNMVTMMVETDDQSEVKTSVLYKINLVFIVIFTGECLLKM
FALRYYFFTIGWNIFDFVVVILSILGIVLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRG
AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKKEAGIDDIFNFETFGN
SIICLFQITTSAGWDGLLSPILNSGPPDCDPDLENPGSSVKGDCGNPSIGIFFFCSYIII
SFLIVVNMYIAIILENFNVATEESSEPLCEDDFEMFYETWEKFDPDATQFIAYSTLSDFV
DTLQEPLKIPKPNKIKLITMDLPMVAGDKIHCLDILFALTKEVLGDSGEMDALKATMEEK
FMAANPSKVSYEPITTTLKRKHEEVCATKIQRAFRRYLLRRSVKQASHMYRHGQTQDAPE
QEGLLATKMQQMYGNSGTEVEAAPALGLAPIPGSETPEAGGAQDKERLVKESLV
NT seq
5565 nt
NT seq
+upstream
nt +downstream
nt
atggctgctggcctgccctgcatcccaggcccccagaacctgcgccccttcacgccagcc
tccctggaggccatcgagcggcgcatggccgaggccgaggcgctgcgcataaagaggcag
caggtggagatgcccgaggaggaggagatcaaacccagcagcgacctagaggctggcaag
aacctgcccctcatctacggtgatccacccctggagctcatcgggacccccctggaggac
ctggaccctttctacaaggataagaagaccttcatagtgctcaacaaaggcaaggccatc
ttccgcttctcggccacccctgccctctacctgctgggccccttccaccccatccgcaga
ggagccatcaaagtgctgatccattcgtttaaattattcagcatgttcatcatgatcacc
atcctcaccaactgcgtgttcatgacgctcagcaaccccccagcgtggtccaagaacgtg
gaatacaccttcactgggatctacacctttgagtccctcatcaaggtgctgtcaagaggc
ttctgcatcgacgacttcacattcctgcgcgacccgtggaactggctggacttcatggtc
atctccatggcctacatcactgagttcgtggacctggggaacatctctgctctcaggacc
ttccgcgtcctccgcgccttgaaaaccatcaccgtgataccagggctgaagaccatcgtg
ggggctctgatccagtcggtgaagaagctctctgatgtgatgatcctcaccgtcttctgc
ctgagcgtcttcgccctcatcgggctgcagctcttcatgggcaacctgaggcagaagtgt
gtgaggtggcctcctttcaacgacagcctgctggggctggacaacagctcctggcccaac
acaaccttcctgctggggctgggcaacggctcctggcccaacgcaacctcctacggcagc
ttcgccggcggcagcggtgccaacttcaccgaggacgtggcaggcaacttcaccagcaac
ttcaccagcaacagcacctttgacttcgaggcctacatcaatgatgaagccaacttctac
ttcctggatggagctcttgatgccctgctctgtgggaacagcagtgatgctgggaagtgc
ccagaagggttccagtgcatgaaggctgggaggaaccccaactatggctacaccagctac
gacaccttcagctgggctttcctggccctcttccgcctcatgacccaggacttctgggag
aacctcttccagctgacactgcgagcagcagggaagacctacatgatcttcttcgtggtg
gttatatttcttggctccttttacctcatcaacctcatcctggcagtggtggccatggct
tacgcagagcagaacgatgccaccatgctggaggagcagcagaaggaggaggagttccag
cagctcatggagcagctaaagaagcagcaagaggaggaagagaggaggttgcaggagagg
acatccagcagcagttccctgcccagcagtgtggctgagaaggagcacgactcagacccc
agcagtgaccaggacaaggcaaaggactgcaacgggcaggtgatccccaagatcaagctg
gagaggtctgctacagtggttgatttcaacccaacctatgagccagagaaatcagaccac
aaccacctcgctgtgggcaaccaagatggaccaggccttgagaagagggtgggaagtgcc
atcagtgtcatctccaacgctgtggaagagctggaggaagctcaccagaagtgcccaccc
tggtggtacaaatttgcccacaccttcctggtctggaattgctgtcccccgtgggttaag
ctgaaagagtttgtcaagatggtggtgatggatccctttgtggacctgggcatcaccatc
tgcatcgtgctcaacacagtcttcatggccatggagcactaccccatgacggaggagttc
gagaacgtgctgactgtgggcaacctggtcttcacaggcatcttcacagcagagatggtc
ctgaagctcattgctctggatccctacgagtacttccagcagggctggaatgtctttgac
agcatcatcgtcaccctgagcctggtggagctgggcctggccaacgtgcaggggctctcc
gtgctccgctccttccgcctgctgagggttttcaagctggccaagtcctggcccaccctc
aacatgctgatcaagatcattggcaactcggtgggcgctctgggcaacctgacgctggtg
ctggccatcatcgtcttcatcttcgccgtggtggggatgcagctctttggcaagagctac
ctggactgtgtctgcaagatctccctggactgcaccctgcctcgctggcacatgaatgac
ttcttccactccttcctcatcgtcttccgcatcctctgcggggagtggatcgagaccatg
tgggactgcatggaggtggccgggcagaccatgtgcctcatcgtcttcatgatggtcatg
gtcattggcaacctggtggtgctgaacctattcctcgccctgctgctgagctccttcagc
gccgacagcctggcggcttccgacgacgacggggagctgaacaacctgcagatcgccatc
ggcaggatcaccaggggcatcgacttcgccaaggcttccctcctctccctcctccacggg
ctgtggaaaggcaagaaagtggccccagaggacgagcaggagcccagcaaggcagacaac
tccgtgctcaaccacgtcgacagcagccaggagcccaaggcagagtacctggacggagtg
gcaggcaaggagcacttcttcaccgacgagctggaccacatgaacttcatcaacaacccc
agcctgaccctgcaggtgcccattgcctcggaggagtcagacctctacgaggagaccagc
acccagtccgacaccgaggatgccaagaatcccctctccagtgacaacgcctcctccctg
tgcagcaccgtggactacaaacccccacagcccgaggaggaggaggtggcagaggaggct
gaggagagcaacgagcctgaggagtgcttcactgaaggctgtgtgaagaggttcccctgc
ctctacgtggacatcagcagcgagagggggaggctgtggtggaacctgcgtcggacctgc
ttccgcatcgtggagcacgactggtttgagaccttcatcgtcttcatgatcctcctcagc
agtggagccctggcttttgaggacatctacatcgagcagcagaaggtgatccgcaccatc
ctggagtacgccgacaaggtcttctcctacatcttcgtcctggagatgctgctcaagtgg
gtggcctatggcttcaaggtctacttcaccaacgcctggtgctggctggacttcctcatt
gtggatgtctccctggtcagcctgacagccaactggttgggatactcggagctgggagcc
atcaagtccctgcggacgctgcgggccctgagacccctgcgtgccctctccagatttgaa
ggcatgagggtggtggtgaacgccctgctgggtgccatcccctccatcatgaacgtgctg
ctggtgtgcctgatcttctggctgatcttcagcatcatgggcgtgaacctgttcgcgggg
aagtactatcgctgcgtcaacaccaccaccggggagctcttcgacatcagcctggtgaac
aacaagagcgactgcatggccttgctgcacaccaacgaggtcaggtggctcaatgtcaag
gtcaacttcgacaacgtgggcttgggatacctctccttgctgcaggtggcaaccttcaaa
ggctggatggacatcatgtacgcagctgtggactcacgggagattgaggagcagccttcg
tatgagatcaacctctacatgtacatctacttcgtcgtcttcatcatcttcggcgccttc
ttcaccttgaacctcttcatcggtgtcatcatcgacaacttcaaccagcagaagaaaaag
tttggaggcaaagacatcttcatgacagaagagcagaagaaatactacaatgccatgaag
aagcttggctccaagaaaccccagaagcccatccccaggccgtcgaacaaggtgcaaggg
atggtgtttgactttgtcaccaagcaagtgtttgacataaccatcatgatcctcatctgt
ctcaacatggtgaccatgatggtggaaacagatgaccagagtgaggtgaaaacctctgtc
ctctacaagatcaacctggtcttcatcgtcatcttcaccggggagtgcctgctcaagatg
ttcgccctgcgctactacttcttcaccatcggctggaacatctttgacttcgtggtggtc
atcctctccatcttaggcattgtgctgtcagacatcatcgagaagtacttcgtgtccccg
acgctgttccgggtgatcaggctggccaggatcggccgcgtcctgcgcctgatccggggg
gccaagggcatccggacgctgctcttcgccctgatgatgtccctgcctgccctcttcaac
atcggcctcctgctcttcctcgtcatgttcatctactccatcttcggcatgtccaacttc
gcctacgtcaagaaggaggcaggcatcgacgacatcttcaacttcgagacctttggcaac
agcatcatctgcctcttccagatcaccacctcggcgggctgggatgggctgctcagcccc
atcctcaacagcggccccccggactgcgaccccgacctggagaaccctggcagctcggtc
aaaggggactgcggcaacccttccatcggcatcttcttcttctgcagctacatcatcatc
tccttcctcatcgtggtcaacatgtacatcgccatcatcctggagaacttcaacgtggcc
accgaggagagcagcgagccgctctgcgaggacgacttcgagatgttctacgagacctgg
gagaagttcgaccccgatgccacccagttcatcgcctacagcaccttgtctgacttcgtg
gacaccttacaggagcccctcaaaatccccaagcccaacaagatcaagctgatcaccatg
gacctccccatggtggccggggacaaaatccactgcttggatatcctcttcgccttgact
aaggaagtgctgggagactcgggagagatggacgccttgaaggccaccatggaggagaag
ttcatggctgcaaacccttccaaggtctcttatgaacccatcaccaccactctgaagagg
aagcacgaggaggtctgcgccaccaagatccagagggccttccgcaggtacctgctgcgg
cgctcggtgaagcaggcgtcccacatgtaccggcacggccagacccaggatgccccggag
caggaggggctgctggccaccaaaatgcagcagatgtatgggaacagtgggacagaggtg
gaggcagcccctgccctggggctcgcccccatccccggctcagagacaccagaggctggc
ggagctcaggataaggagcgcctggtgaaggagtcgctggtgtaa
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