Pseudomonas sp. UW4: PputUW4_01376
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Entry
PputUW4_01376 CDS
T02357
Symbol
capD1
Name
(GenBank) polysaccharide biosynthesis protein
KO
K15894
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.115
]
Organism
ppuu
Pseudomonas sp. UW4
Pathway
ppuu00541
Biosynthesis of various nucleotide sugars
ppuu01100
Metabolic pathways
ppuu01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PputUW4_01376 (capD1)
Enzymes [BR:
ppuu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.115 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-inverting)
PputUW4_01376 (capD1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
Polysacc_syn_2C
3Beta_HSD
GDP_Man_Dehyd
NAD_binding_10
NmrA
NAD_binding_4
RmlD_sub_bind
KR
adh_short
Sacchrp_dh_NADP
NAD_Gly3P_dh_N
TrkA_N
F420_oxidored
Shikimate_DH
DUF4192
Sigma54_activ_2
Motif
Other DBs
NCBI-ProteinID:
AFY18582
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Position
1610337..1611347
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AA seq
336 aa
AA seq
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MFDNKVLMITGGTGSFGHTVLKRFLDTDVKEIRVFSRDEKKQEDMRIALSNDKVKFYIGD
VRDRDSLDQAMVGVDYIFHAAALKQVPSCEFYPMEAVRTNVMGTENVLNAAIASGVQRVV
VLSTDKAVYPINAMGISKAMAEKLMVAKSRMIPATGPVICATRYGNVMASRGSVIPLFIN
QLQSGEPLTVTDPNMTRFLMSLEDSVDLVLHAFEHAEQGDIFVQKAPASTVADLAQALKE
LFVRDNAVKVIGTRHGEKLYESLISREEMAKAEDMGRYYRIPSDNRDLNYKKFFVEGEQE
ISDLDDYTSHNTERLDVEGVKKVLLNLEYIQEQLDA
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgttcgataataaggttttgatgatcacgggcggtacgggctcgtttggccatacggtg
ttgaagcgttttctggatactgatgtaaaagagattcgtgtattcagccgtgacgagaag
aagcaggaagatatgcgcattgccttgtcgaatgacaaggtgaagttctacatcggtgac
gtgcgtgatcgcgacagcctggatcaggcgatggtgggggtggattacattttccacgcc
gctgccctgaaacaggtgccttcctgcgagttttacccgatggaagccgtgcgtaccaac
gtcatgggtaccgagaacgttttgaatgcggctattgcttcgggcgtgcaacgcgttgtc
gtactcagtaccgacaaagcggtatacccgatcaatgccatgggcatttccaaggccatg
gctgaaaagctgatggttgccaaatcgcggatgattccggcgacaggcccggtgatttgc
gcaacccgctacggtaacgtcatggcatcgcgcggttcggtgatcccgttgttcatcaat
cagttgcagagtggcgagccgctgaccgtcaccgacccgaacatgacacgtttcctgatg
tcgctcgaggattccgttgacctggtcctgcacgcgttcgagcatgccgagcaaggtgat
attttcgtccagaaagcaccagcctcgacagtggcggacctggcccaggcactcaaggaa
ctgtttgttcgcgacaatgccgtcaaggtcatcggtactcgccacggcgaaaaactctac
gagtcgctgatctcccgagaagaaatggccaaggccgaagacatgggacgctactaccgc
atcccttcggacaatcgcgaccttaactacaagaagttttttgtcgagggcgagcaggaa
atttccgatctcgacgactacacctcccacaacaccgagcgtctcgatgtagaaggcgtg
aagaaagttctgttgaatctggaatacattcaggagcaacttgatgcttaa
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