Pseudomonas parafulva: NJ69_10130
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Entry
NJ69_10130 CDS
T03520
Name
(GenBank) 2-oxoglutarate dehydrogenase
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
ppv
Pseudomonas parafulva
Pathway
ppv00020
Citrate cycle (TCA cycle)
ppv00785
Lipoic acid metabolism
ppv01100
Metabolic pathways
ppv01110
Biosynthesis of secondary metabolites
ppv01120
Microbial metabolism in diverse environments
ppv01200
Carbon metabolism
ppv01210
2-Oxocarboxylic acid metabolism
Module
ppv_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppv_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ppv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NJ69_10130
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
NJ69_10130
Enzymes [BR:
ppv01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
NJ69_10130
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Gene cluster
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Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
DUF7284
Motif
Other DBs
NCBI-ProteinID:
AIZ33315
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Position
complement(2392313..2395144)
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AA seq
943 aa
AA seq
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MQESVMQRMWESAHLSGGNAAYVEELYELYLHDPNAVPEEWRTYFQKLPADGSTATDVSH
STIRDHFVLLAKNQRRAQPVSAGSVSSEHEKKQVEVLRLIQAYRMRGHQAAKLDPLGLWQ
RPAPVDLSINHYGLTNADLDTTFRAGDLYIGKEEASLREIVDALQKTYCRTIGSEFTHIV
DSEQRSWFQQRLESVRGRPDFSVDVQTHLLERVTAGEGLEKYLGTKYPGTKRFGLEGGES
LIPMLDEMIQRSGSYGTKEVVIGMAHRGRLNVLVNTFGKNPRELFDEFEGKKMNELGSGD
VKYHQGFSSNVMTSGGEVHLAMAFNPSHLEIVSPVVEGSVRARQDRRNDSIGDKVLPISI
HGDAAFAGQGVVMETFQMSQTRGFKTGGTVHIVINNQVGFTISNPLDARSTEYATDVAKM
IQAPILHVNGDDPEAVLFVTQLAIDYRMQFKRDVVIDLVCYRRRGHNEADEPNGTQPLMY
QQISKQRTTRELYADALIQAGRIDSERAQAKIDEYRSALDNGLHVVKSLVKEPNRELFVD
WRPYLGHAWTARHDTRFDLKTLQELSAKLLELPEGFVVQRQVAKIYEDRQKMQAGGLPIN
WGYAETMAYATLQFEGHPIRMTGQDIGRGTFSHRHAVLHNQKDAGTYVPLMNLFPGQPRF
ELYDSFLSEEAVLAFEYGYSTTTPNALVIWEAQFGDFANGAQVVIDQFITSGEHKWGRLC
GLTMLLPHGYEGQGPEHSSARLERYLQLCAEQNIQVCVPTTPAQIYHLLRRQVIRPLRKP
LIVLTPKSLLRHKLAVSTLEDLAEGSFQTVIPEIDAIEPAKVERLVLCSGKVYYDLLEKR
RAEGREDIAILRIEQLYPFPEDDLVEILAQYTNLKHAVWCQEEPMNQGAWYSSQHHMRRI
LGRHDKALVLEYAGRDASAAPACGYASKSAEQQEKLLQDAFTV
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaagcgtgatgcagcgcatgtgggaaagcgcccacctttcaggtggtaacgct
gcatatgtggaagagctctacgaactctacctgcacgaccctaacgctgtgccagaagag
tggcgcacctacttccagaagttgcccgccgacggcagcaccgctaccgacgtctcgcac
tcgacgatccgcgatcatttcgtactgctggcgaagaaccagcgccgcgctcaaccggta
tctgccgggagcgtgagcagcgaacacgagaagaagcaggttgaagtgctgcgactgatc
caggcctatcgtatgcgcggtcatcaggctgccaagctcgaccccttggggttgtggcag
cgccctgcgcccgtagacctgtcgatcaatcactacggcttgaccaatgccgatcttgat
acgaccttccgtgccggcgacctgtacatcggcaaagaggaagcgagcctacgcgaaatc
gtcgatgccttgcagaagacatattgtcgcaccatcggctccgagttcacccacatcgtc
gattccgagcagcgcagctggttccagcagcgcctggaaagcgtgcgtggtcgtcctgac
ttctccgtcgacgtgcagactcacctgctcgaacgcgtcaccgccggtgaaggcctggag
aaatacctgggcaccaagtatccaggcaccaagcgtttcggcctggaaggcggcgagagc
ctgattccgatgctggacgaaatgatccagcgctccggctcctatggcaccaaggaagtc
gtgatcggcatggcccaccgcggtcgtctgaacgtgctggtcaataccttcggcaagaac
ccgcgcgagctgttcgacgagttcgaaggcaagaagatgaacgagctgggttccggtgac
gtgaagtatcaccagggcttctccagcaacgtcatgaccagcggcggcgaagtccacctg
gccatggcattcaacccgtcccacctggaaatcgtctcgccggtggtggagggctcggtt
cgtgcccgccaggaccgtcgcaacgacagcatcggtgacaaggttctgcccatttccatc
cacggtgacgcggcgttcgccggtcagggcgtggtcatggaaaccttccagatgtcgcag
acccgcggtttcaagaccggcggcactgtgcacatcgtgatcaacaaccaggtcggcttc
accatcagcaacccactggatgcgcgctccaccgagtacgccaccgacgttgccaagatg
atccaggcgccgatcctgcatgtgaatggcgacgacccggaagccgtgctgttcgtcacc
cagttggccatcgactatcgcatgcagttcaagcgtgatgtggtgatcgatctggtctgc
taccgccgtcgcggtcataacgaggctgacgagcccaacggcacccagccgctgatgtac
cagcagatcagcaagcagcgcacgacccgtgagctgtacgccgacgcgctgatccaggct
ggtcgcatcgacagcgagcgcgcccaggccaagatcgacgagtaccgcagcgcgctggac
aacggcctgcacgtggtcaagagcctggtcaaggaaccgaaccgcgagttgttcgtcgac
tggcgtccgtatctgggccatgcctggaccgcgcgtcacgacacccgcttcgacctcaag
accctgcaggaactgtcggccaagctgctcgagctgccggaaggcttcgtcgtccagcgt
caggtcgccaagatctacgaagaccggcagaagatgcaggccggtggcctgccgatcaac
tggggttacgcagagaccatggcctacgccactctgcagttcgaaggtcacccgatccgc
atgaccggccaggacattggccgtgggaccttctcgcaccgtcacgcggtgctgcacaac
cagaaggacgccggcacctacgtaccgctgatgaacctgttcccgggccagccgcgtttc
gaactgtacgactccttcctttcggaagaggccgtgctggcgttcgaatacggctactcg
accaccacgccgaacgcgctggtgatctgggaagcccagttcggcgacttcgccaacggt
gcgcaggtggtaatcgaccagttcatcaccagcggcgaacataaatggggccgtctgtgc
ggtctgaccatgctgttgccgcacggttatgaagggcagggcccggagcactcctcggca
cgccttgagcgttacctgcagttgtgcgctgagcagaacatccaggtctgcgtgccgacc
acgccagcgcagatctaccacctgctgcgtcgtcaggtcatccgtccgctgcgcaagccg
ctgatcgtgctgacgcccaagtcgctgttgcgccacaagctggctgtgtcgaccctggaa
gacctggccgaaggctcgttccagaccgtcattccggaaatcgatgcgatcgagccggcc
aaggtcgagcgtctggtgctgtgcagcggcaaggtctactacgacctgctggaaaaacgc
cgtgccgaaggccgcgaagacatcgccatcttgcgtatcgagcagctgtatccgttccct
gaggacgatctggtcgaaatcctggcgcagtacaccaacctcaagcatgcggtctggtgc
caggaagagccgatgaaccagggcgcctggtacagcagtcagcaccacatgcgtcgcatc
ctgggccgccacgacaaggcgctggtcctcgagtacgccggtcgcgacgcctctgccgcg
cctgcttgtggctacgcgtccaagagcgccgagcagcaggaaaaactgctgcaagacgcg
ttcactgtctaa
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