Pseudomonas putida W619: PputW619_0939
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Entry
PputW619_0939 CDS
T00675
Name
(GenBank) UDP-N-acetylmuramyl-tripeptide synthetase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
ppw
Pseudomonas putida W619
Pathway
ppw00300
Lysine biosynthesis
ppw00550
Peptidoglycan biosynthesis
ppw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PputW619_0939
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PputW619_0939
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppw01011
]
PputW619_0939
Enzymes [BR:
ppw01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
PputW619_0939
Peptidoglycan biosynthesis and degradation proteins [BR:
ppw01011
]
Precursor biosynthesis
Amino acid ligase
PputW619_0939
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
ADH_zinc_N
CBP_BcsQ
WD40_APC4_C-half
Motif
Other DBs
NCBI-ProteinID:
ACA71444
UniProt:
B1J1Y5
LinkDB
All DBs
Position
1032421..1033911
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AA seq
496 aa
AA seq
DB search
MMTMPLSKLFAHASRDPLIRELTLDSRAVRAGDLFLAVPGAKVDGRDHISDALARGAAAV
AYEQQGTHVLPITDVPLIPVKGLIAQLSDIAGRFYGEPSRQLNLVGVTGTNGKTSVTQLV
AQALDALGQRCGLIGTLGTGFHGELQSGRLTTPDPIAVQSTLYDLKKAGAKAVAMEVSSH
ALEQGRVAALEFDIAVMTNLSRDHLDYHGSMEAYEAAKAKLFAWPGLRCQVVNLDDGFGR
RLAADFARRPSVDHIETRLLSYSLENSDASLYCREAKFDDDGVRAIIVTAQGERTLRSQL
LGRFNLSNMLAAVATLMALDYSLDEILKVTPQLQGPVGRMQRLGGGEKPLVVVDYAHTPD
ALEKVLQALRPHAHGQLLCLFGCGGDRDRGKRPLMAEVAERLADRVLVTDDNPRTEDPQA
IFNDIRPGFARPADVEFIAGRGEAIAHLIASAAASDVIVLAGKGHEDYQEINGQRHDFSD
LVEAEKALAAWEAPHA
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgatgacaatgccattgagcaagcttttcgcccacgccagtcgcgatccgctgatccgt
gagctgaccttggacagccgtgctgtgcgcgcaggtgacctgttcctggccgtgccgggg
gccaaggtcgatggccgtgaccatatcagcgacgcgctggcccgtggtgccgccgcagtc
gcttacgaacagcagggcacccatgtgctgccgatcaccgatgtgccgctgatcccggtc
aaaggcctgatcgcccagctgtcggatattgccggccgcttctatggcgagccgagccgg
cagttgaacctggtcggagttaccggcaccaacggcaagaccagcgtcactcaactggtg
gcccaggcgcttgatgcgcttggccagcggtgcggcctgatcggtaccctgggtaccggg
tttcatggtgagttgcagagcggccggctgaccacgccagacccgattgcagtgcagtcg
actttgtacgacctgaaaaaggccggcgccaaggccgtggcaatggaagtgtcctcgcac
gccctggagcagggtcgtgttgctgcactggaattcgatatcgcggtgatgaccaacctg
tcccgtgatcatctggactatcacggcagcatggaggcctatgaggccgcgaaggccaag
cttttcgcctggcctggcctgcgttgccaggtggtcaacctggatgacggattcgggcgt
cgcctggcggctgattttgcccgtcgtccgagtgtcgatcatatcgagacccggttgctc
agctatagcctggaaaactctgacgcttccttgtattgccgtgaagccaaattcgatgac
gatggcgtacgcgccatcatcgtcactgcccagggtgagcgcaccttgcgcagtcagctg
ctgggccgcttcaacttgagcaacatgctcgcggccgtggccactctgatggctctggat
tattcgctggatgaaatcctcaaggtcaccccgcaattgcagggcccggtgggccgcatg
cagcgccttggcggtggtgagaagccgttggtggtggtcgactacgcgcacactcctgac
gccctggaaaaagtactccaggccctgcgcccgcacgcccacggccagttgctgtgcctg
ttcggttgtggcggcgatcgcgatcgtggcaagcgtccgctgatggccgaggtggccgag
cgcctggctgatcgtgtactggtcactgacgataacccccgtaccgaagatccgcaggcc
atcttcaacgacattcgtcctggttttgcccggcccgccgacgtcgagttcatcgccggc
cgtggcgaggccattgcacacctgatcgcttctgctgccgcctcggacgtcatcgtcctg
gcgggcaaggggcacgaggattaccaggaaatcaatggccagcgccatgacttctccgac
ctggtcgaagccgaaaaggcacttgcagcctgggaggctccacatgcttaa
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