Pseudomonas putida DOT-T1E: T1E_1833
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Entry
T1E_1833 CDS
T02181
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ppx
Pseudomonas putida DOT-T1E
Pathway
ppx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
T1E_1833 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppx03400
]
T1E_1833 (nth)
Enzymes [BR:
ppx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
T1E_1833 (nth)
DNA repair and recombination proteins [BR:
ppx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
T1E_1833 (nth)
Prokaryotic type
T1E_1833 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Ogg-HhH
RecR_HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
AFO47681
UniProt:
I7C3K7
LinkDB
All DBs
Position
complement(2006040..2006678)
Genome browser
AA seq
212 aa
AA seq
DB search
MNAAKRLEIFRRLHEDNPDPKTELAYTTPFELLVAVTLSAQSTDVGVNKATARLFPVANT
PEAIYALGVEGLSEYIKTIGLYNSKAKNVIEACRLLIERHDSQVPQTREALEALPGVGRK
TANVVLNTAFRQPAMAVDTHIFRVSNRTGIAPGKTVLEVEKKLVKFVPKDYLLDAHHWLI
LHGRYVCQARKPRCGSCRIEDLCEYKHKTSDD
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgccaaacgcctggagatttttcgcaggctgcacgaagacaaccccgacccc
aagaccgaactggcctacacgaccccgtttgaactgctggtcgccgtgacactgtccgcg
caatccaccgacgtcggcgtcaacaaggccactgcccgcctgttccccgtcgccaacacc
cccgaggccatctatgccctgggcgttgaaggcctcagcgaatacatcaagaccatcggg
ctttacaacagcaaggccaagaatgtcatagaagcgtgccggctgctgatcgagcgccac
gacagccaggtaccgcaaacccgcgaagcgttggaggcgctacccggcgtcggccgcaaa
accgccaatgtggtgcttaacacggcgtttcgccaaccggccatggccgtggatactcat
attttccgggtgagtaaccgcacgggcatcgcgccaggcaaaacggtgctggaagtggaa
aagaaactggtcaagtttgtacccaaggactacctgctcgacgcccaccactggctgatc
ctgcacgggcgctacgtatgccaggcgcgcaagccaaggtgcggcagctgcaggatcgaa
gatttgtgcgagtacaagcacaaaacctccgacgattga
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