Pongo pygmaeus (Bornean orangutan): 129007823
Help
Entry
129007823 CDS
T10128
Symbol
MMP13
Name
(RefSeq) collagenase 3
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg04657
IL-17 signaling pathway
ppyg04926
Relaxin signaling pathway
ppyg04928
Parathyroid hormone synthesis, secretion and action
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
129007823 (MMP13)
09152 Endocrine system
04926 Relaxin signaling pathway
129007823 (MMP13)
04928 Parathyroid hormone synthesis, secretion and action
129007823 (MMP13)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppyg01002
]
129007823 (MMP13)
Peptidases and inhibitors [BR:
ppyg01002
]
Metallo peptidases
Family M10
129007823 (MMP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_4
Reprolysin_5
DUF4953
Motif
Other DBs
NCBI-GeneID:
129007823
NCBI-ProteinID:
XP_054295092
LinkDB
All DBs
Position
9:complement(104505639..104518626)
Genome browser
AA seq
471 aa
AA seq
DB search
MHPGVLAAFLFLSWTHCRALPLPSDGDEDDLSEEDLQFAERYLRSYYHPTNLAGILKENA
ASSMTDRLREMQSFFGLEVTGKLDDNTLDVMKKPRCGVPDVGEYNVFPRTLKWSKMNLTY
RIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFTRLHDGIADIMISFGIKEHGDFYPFDG
PSGLLAHAFPPGPNYGGDAHFDDDETWTSSSKGYNLFLVAAHEFGHSLGLDHSKDPGALM
FPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNPKHPKTPDKCDPSLSLDAITSLRGET
MIFKDRFFWRLHPQQVDAELFLTKSFWPELPNRIDAAYEHPSHDLIFIFRGRKFWALNGY
DILEGYPKKISELGFPKEVKKISAAVHFEDTGKTLLFSGNQVWRYDDTNHIMDKDYPRLI
EEDFPGIGDKVDAVYEKNGYIYFFNGPIQFEYSIWSKRIVRVMPANSILWC
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgcatccaggggtcctggctgccttcctcttcttgagctggactcattgtcgggccctg
ccccttcccagtgatggtgatgaagatgatttgtctgaggaagacctccagtttgcagag
cgctacctgagatcatactaccatcccacaaatctcgcgggaatcctgaaggagaatgca
gcaagctccatgactgacaggctccgagaaatgcagtcttttttcggcttagaggtgact
ggcaaacttgacgataacaccttagatgtcatgaaaaaaccaagatgcggggttcctgat
gtgggtgaatacaatgttttccctcgaactctcaaatggtccaaaatgaatttaacgtac
agaattgtgaattacacccctgatatgactcattctgaagtcgaaaaggcgttcaaaaaa
gccttcaaagtttggtctgatgtaactcctctgaattttaccagacttcacgatggcatt
gctgacatcatgatctcttttggaattaaggagcatggcgacttctacccatttgatggg
ccctctggcctgctggctcacgcttttcctcctgggccaaattacggaggagatgcccat
tttgatgatgatgaaacctggacaagtagttccaaaggctacaacttatttcttgttgct
gcccatgagttcggccattccttaggtcttgaccactccaaggaccctggagcactcatg
tttcccatctacacctacaccggcaaaagccactttatgcttcctgatgacgatgtacaa
gggatccagtctctctatggtccaggagatgaagaccccaaccctaaacatccaaaaacg
ccagacaaatgtgacccctccttatcccttgatgccattaccagtctccgaggagaaaca
atgatctttaaagacagattcttctggcgcctgcatcctcagcaggttgatgcggagctg
tttttaacgaaatcattttggccagaacttcccaaccgtattgatgctgcatatgagcat
ccttctcatgacctcatcttcatctttagaggtagaaaattttgggctcttaatggttat
gacattctggaaggttatcccaaaaaaatatctgaactgggttttccaaaagaagttaag
aagataagtgcagctgttcactttgaggatacaggcaagactctcctcttctcaggaaac
caggtctggagatatgatgatactaaccatattatggataaagactatccgagactaata
gaagaagacttcccaggaattggtgataaagtagatgctgtctacgagaaaaatggttat
atctattttttcaatggacccatacagtttgaatacagcatctggagtaagcgcattgtt
cgcgtcatgccagcaaattccatattgtggtgttaa
DBGET
integrated database retrieval system
