Pongo pygmaeus (Bornean orangutan): 129011272
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Entry
129011272 CDS
T10128
Symbol
RB1
Name
(RefSeq) retinoblastoma-associated protein isoform X1
KO
K06618
retinoblastoma-associated protein
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg01522
Endocrine resistance
ppyg04110
Cell cycle
ppyg04218
Cellular senescence
ppyg04934
Cushing syndrome
ppyg05160
Hepatitis C
ppyg05161
Hepatitis B
ppyg05163
Human cytomegalovirus infection
ppyg05165
Human papillomavirus infection
ppyg05166
Human T-cell leukemia virus 1 infection
ppyg05167
Kaposi sarcoma-associated herpesvirus infection
ppyg05169
Epstein-Barr virus infection
ppyg05200
Pathways in cancer
ppyg05203
Viral carcinogenesis
ppyg05207
Chemical carcinogenesis - receptor activation
ppyg05212
Pancreatic cancer
ppyg05214
Glioma
ppyg05215
Prostate cancer
ppyg05218
Melanoma
ppyg05219
Bladder cancer
ppyg05220
Chronic myeloid leukemia
ppyg05222
Small cell lung cancer
ppyg05223
Non-small cell lung cancer
ppyg05224
Breast cancer
ppyg05225
Hepatocellular carcinoma
ppyg05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
129011272 (RB1)
04218 Cellular senescence
129011272 (RB1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
129011272 (RB1)
05207 Chemical carcinogenesis - receptor activation
129011272 (RB1)
05203 Viral carcinogenesis
129011272 (RB1)
09162 Cancer: specific types
05212 Pancreatic cancer
129011272 (RB1)
05225 Hepatocellular carcinoma
129011272 (RB1)
05226 Gastric cancer
129011272 (RB1)
05214 Glioma
129011272 (RB1)
05220 Chronic myeloid leukemia
129011272 (RB1)
05218 Melanoma
129011272 (RB1)
05219 Bladder cancer
129011272 (RB1)
05215 Prostate cancer
129011272 (RB1)
05224 Breast cancer
129011272 (RB1)
05222 Small cell lung cancer
129011272 (RB1)
05223 Non-small cell lung cancer
129011272 (RB1)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
129011272 (RB1)
05161 Hepatitis B
129011272 (RB1)
05160 Hepatitis C
129011272 (RB1)
05163 Human cytomegalovirus infection
129011272 (RB1)
05167 Kaposi sarcoma-associated herpesvirus infection
129011272 (RB1)
05169 Epstein-Barr virus infection
129011272 (RB1)
05165 Human papillomavirus infection
129011272 (RB1)
09167 Endocrine and metabolic disease
04934 Cushing syndrome
129011272 (RB1)
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
129011272 (RB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ppyg01009
]
129011272 (RB1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppyg03000
]
129011272 (RB1)
Protein phosphatases and associated proteins [BR:
ppyg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129011272 (RB1)
Transcription factors [BR:
ppyg03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
129011272 (RB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rb_C
RB_A
RB_B
DUF3452
TFIIB
Motif
Other DBs
NCBI-GeneID:
129011272
NCBI-ProteinID:
XP_054302077
LinkDB
All DBs
Position
14:56830655..57005548
Genome browser
AA seq
928 aa
AA seq
DB search
MPPKTPRKTAATAAAAAAEPPAPPPPPPPEEDPEQDSGPEDLPLVRLEFEETEEPDFTAL
CQKLKIPDHVRERAWLTWEKVSSVDGVLGGYIQKKKELWGICIFIAAVDQDEMPFTFTEL
QKNIEISVHKFFNLLKEIDTSTKVDNAMSRLLKKYDVLFALFSKLERTCELIYLTQPSSS
ISTEINSSLVLKVSWITFLLAKGEVLQMEDDLVISFQLMLCVLDYFIKLSPPVLLKEPYK
TAVIPINGSPRTPRRGQNRSARIAKQLENDTRIIEVLCKEHECNIDEVKNVYFKNFIPFM
NSLGLVTSNGLPEVESLSKRYEEIYLKNKDLDARLFLDHDKTLQTDSIDSFETQRTPRKS
NLDEEVNIIPPHTPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESILKRVK
DIGYIFKEKFAKAVGQGCVEIGSQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDN
IFHMSLLACALEVVMATYSRSTSQNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEG
NLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQSKDREGPTDHLESACPLNLPLQNNH
TAADMYLSPVRSPKKKGSTTRVNSTANAETQATSAFQTQKPLKSTSLSLFYKKVYRLAYL
RLNTLCERLLSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICKVKNIDLK
FKIIVTAYKDLPHAVQETFKRVLIKEEEYDSIIVFYNSVFMQRLKTNILQYASTRPPTLS
PIPHIPRSPYKFPSSPLRIPGGNIYISPLKSPYKISEGLPTPTKMTPRSRILVSIGESFG
TSEKFQKINQMVCNSDRVLKRSAEGSNPPKPLKKLRFDIEGSDEADGSKHLPGESKFQQK
LAEMTSTRTRMQKQKMNDSMDTSNKEEK
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgccgccaaaaaccccccgaaaaacggccgccaccgctgccgctgccgccgcggaaccc
ccagcaccgccgccgccgccccctcctgaggaggacccagagcaggacagcggcccggag
gacctgcctctcgtcaggcttgagtttgaagaaacagaagaacctgattttactgcgtta
tgtcagaaattaaagataccagatcatgtcagagagagagcttggttaacttgggagaaa
gtttcatctgtggatggagtattgggaggttatattcaaaagaaaaaggaactatgggga
atctgtatctttattgcagcagttgaccaagatgagatgccgttcacttttactgagcta
cagaaaaatatagaaatcagtgtccataaattctttaacttactaaaagaaatcgatacc
agtaccaaagttgataatgctatgtcaagactgttgaagaagtatgatgtattgtttgca
ctcttcagcaaattggaaaggacatgtgaacttatatatttgacacaacccagcagttcg
atatctactgaaataaattcttcattggtgctaaaagtttcttggatcacatttttatta
gctaaaggggaagtattacaaatggaagatgatctggtgatttcatttcagttaatgcta
tgtgtccttgactattttattaaactctcacctcccgtgttgctgaaagaaccatataaa
acagctgttatacccattaatggttcacctcgaacacccaggcgaggtcagaacaggagt
gcacggatagcaaaacaactagaaaatgatacaagaattattgaagttctctgtaaagaa
catgaatgtaatatagatgaggtgaaaaatgtttatttcaaaaattttataccttttatg
aattctcttggacttgtaacatctaatggacttccagaggttgaaagtctgtctaaacga
tatgaagaaatttatcttaaaaataaagatctagatgcaagattatttttggatcatgat
aaaactcttcagactgattctatagacagttttgaaacacagagaacaccacgaaaaagt
aaccttgatgaagaggtgaatataattcctccacacactccagttaggactgttatgaac
actatccaacaattaatgatgattttaaattcagcaagtgatcaaccttcagaaaatctg
atttcctattttaacaactgcacagtgaatccaaaagaaagtatactgaaaagagtgaag
gatataggatacatctttaaagagaaatttgctaaagctgtgggacagggatgtgtcgaa
attggatcacagcgatacaaacttggagttcgcttgtattaccgagtaatggaatccatg
cttaaatcagaagaagaacgattatccattcaaaattttagcaaacttctgaatgacaac
atttttcatatgtctttattggcgtgcgctcttgaagttgtaatggccacatatagcaga
agtacatctcagaatcttgattctggaacagatttgtctttcccatggattctgaatgtg
cttaatttaaaagcctttgatttttacaaagtgattgaaagttttatcaaagcagaaggc
aacttgacaagagaaatgataaaacatttagaacgatgtgaacatcgaatcatggaatcc
cttgcatggctctcagattcacctttatttgatcttattaaacaatcaaaggaccgagaa
ggaccaactgatcaccttgaatctgcttgtcctcttaatcttcctctccagaataatcac
actgcagcagatatgtatctttctcctgtaagatctccaaagaagaaaggttcaactaca
cgtgtaaattctactgcaaatgcagagacacaagcaacctcagccttccagacccagaag
ccattgaaatctacctctctgtcactgttttataaaaaagtgtatcggctggcctatctc
cggctaaatacactttgtgaacgccttctgtctgagcacccagaactagaacacatcatc
tggacccttttccagcacaccctgcagaatgagtatgaactcatgagagacaggcatttg
gaccaaattatgatgtgttccatgtatggcatatgcaaagtgaagaatatagaccttaaa
ttcaaaatcattgtaacagcatacaaggatcttcctcatgctgttcaggagacattcaaa
cgtgttttgatcaaagaagaggagtatgattctattatagtattctataactcggtcttc
atgcagagactgaaaacaaatattttgcagtatgcttccaccaggccccctaccttgtca
ccaatacctcacattcctcgaagcccttacaagtttcctagttcacccttacggattcct
ggagggaacatctatatttcacccctgaagagtccatataaaatttcagaaggtctgccg
acaccaacaaaaatgactccaagatcaagaatcttagtatcaattggtgaatcatttggg
acttctgagaagttccagaaaataaatcagatggtgtgtaacagcgaccgtgtgctcaaa
agaagtgctgaaggaagcaaccctcctaaaccgctgaaaaaactacgctttgatattgaa
ggatcagatgaagcagatggaagtaaacatctcccaggagagtccaaatttcagcagaaa
ctggcagaaatgacttctactcgaacacgaatgcaaaagcagaaaatgaatgatagcatg
gatacctcaaacaaggaagagaaatga
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