KEGG   Pongo pygmaeus (Bornean orangutan): 129018033
Entry
129018033         CDS       T10128                                 
Symbol
SMCR8
Name
(RefSeq) guanine nucleotide exchange protein SMCR8
  KO
K23611  guanine nucleotide exchange protein SMCR8
Organism
ppyg  Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg04140  Autophagy - animal
ppyg05014  Amyotrophic lateral sclerosis
ppyg05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:ppyg00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    129018033 (SMCR8)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    129018033 (SMCR8)
   05022 Pathways of neurodegeneration - multiple diseases
    129018033 (SMCR8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ppyg04131]
    129018033 (SMCR8)
Membrane trafficking [BR:ppyg04131]
 Autophagy
  Other autophagy associated proteins
   Rab associated proteins
    129018033 (SMCR8)
SSDB
Motif
Pfam: Folliculin
Other DBs
NCBI-GeneID: 129018033
NCBI-ProteinID: XP_054315139
LinkDB
Position
19:complement(17904310..17917346)
AA seq 937 aa
MISAPDVVAFTKEEEYEEEPYNEPALPEEYSVPLFPFASQGANPWSKLSGAKFSRDFILI
SEFSEQVGPQPLLTIPNDTKVFGTFDLNYFSLRIMSVDYQASFVGHPPGSAYPKLNFVED
SKVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISADQHKIMQQFQELSAEFSRAS
ECLKTGNRKAFAGELEKKLKDLDYTRTVLHTETEIQKKANDKGFYSSQAIEKANELASVE
KSIIEHQDLLKQIRSYPHRKLKGRDLCPGEMEHIQDQASQASTTSNPDESADTDLYTCRP
AYTPKLIKAKSTKCFDKKLKTLEELCDTEYFTQTLAQLSHIEHMFRGDLCYLLTSQIDRA
LLKQQHITNFLFEDFVEVDDRMVGKQESIPSKPSQDRPPSSSLEECPIPKVLISVGSYKS
SVESVLIKMEQELGDEEYKEVEVTELSSVDPQENLDYLDMDMKGSISSGESIEVLGTEKS
TSVLSKSDSQASLTVPLSPQVVRSKAVSHRTISEDSIEVLSTCPSEALIPDDFKASYPSA
INEEESYPDGNEGAIHFQASISPPELGESEEGSVENTPSQIDSSCCIGKESDGQLVLPST
PAHTHSDEDGVVSSPPQRHRQKDQGFRVDFSMENANPSSRDNSCEGFPAYELDPSHLLAS
RDISKTSLDNYSDTTSYVSSVASTSSDRIPSAYPAGLSSDRHKKRAGQNALKFIRQYPFA
HPAIYSLLSGRTLVVLGEDETIVRKLVTALAIFVPSYGCYAKPVKHWASSPLHIMDFQKW
KLIGLQRVASPAGAGTLHALSRYSRYTSILDLDNKTLRCPLYRGTLVPRLADHRTQIKRG
STYYLHVQSMLTQLCSKAFLYTFCHHLHLPTHDKETEELVASRQASFLKLTLGLVNEDVR
VVQYLAELLKLHYMQESPGTSHPMLRFDYVPSFLYKI
NT seq 2814 nt   +upstreamnt  +downstreamnt
atgatcagcgcccctgacgtagtggccttcaccaaagaggaagagtatgaagaagagcct
tacaatgagccggccctgcctgaggagtactcggtgccgctcttccccttcgccagccag
ggtgctaacccctggtcaaaactgtccggggccaagttttcgagggacttcattcttatt
tccgagttctctgagcaggtgggaccccaacctttactgaccatccccaatgacaccaaa
gtttttggcacttttgatctcaattacttctccctgcgtatcatgtctgtggattaccag
gcttccttcgtgggccatcctcctggatctgcctaccccaagctgaacttcgtggaggac
tccaaggtggtgctgggagattccaaggagggagcctttgcatacgtgcaccaccttacc
ctatacgacctggaggcccgtggcttcgtgaggccgttttgcatggcttatatctctgca
gaccagcataaaatcatgcagcagtttcaggagctttcagccgaattttccagagcttct
gagtgcttgaagactggcaacaggaaggcatttgctggggaacttgaaaaaaagctgaaa
gacttggattacaccaggacagtgctacacacagaaacggaaatccagaagaaagccaac
gacaaaggcttttactcatctcaggcaattgagaaagccaatgaactggccagtgtggag
aagtccatcattgaacatcaagacctgctgaagcagatccgctcataccctcatcggaag
ttgaaggggcgtgatttgtgtcctggtgagatggagcacatccaggatcaggccagccag
gcatccactacctctaaccctgatgagtctgccgacacagacctttacacctgcagacca
gcctataccccaaaacttatcaaagcaaagtccaccaagtgttttgacaagaagttgaag
accttggaggagctctgtgacactgaatatttcacccagaccctggctcagctcagccac
attgaacacatgttcagaggagacctgtgttaccttctgaccagtcagattgatagagca
cttctaaaacaacagcacataacaaactttctctttgaagactttgtggaggtcgatgac
aggatggtagggaaacaagaaagtataccctctaagcccagtcaagacaggccgccttcc
agttctctagaagaatgcccaattcctaaagtgttaattagtgttggttcttacaagtcc
agtgtggagtctgtgttgatcaagatggagcaggaactgggagatgaggagtacaaggaa
gtggaagtgacggagttgagcagtgtcgacccccaggaaaacttggactacctggatatg
gatatgaaagggagtatcagcagtggtgaaagcattgaagttttgggcacggagaaatcc
acctccgtgctttctaagtctgacagccaggccagcctcacagtaccattgagcccccag
gtggtccggagcaaagcagtcagccacaggaccatcagtgaggacagtattgaagtcctc
agtacctgcccctctgaggccctcatccctgatgactttaaggccagctacccaagtgcc
attaatgaagaagaatcatatccagatggcaatgagggagccatccacttccaagcaagc
atcagtcctccagaactgggtgagtcagaggaaggcagcgtggaaaacaccccatcacaa
atagactcctcctgctgtattgggaaggagagcgatggtcagctggtgctgccttccact
ccagcccacacacactctgacgaggatggggtggtgagcagccccccacagcgccatagg
cagaaggaccaggggttccgtgtagacttttcaatggaaaatgccaacccttcttcccga
gacaacagttgtgaagggtttcccgcttatgaactggacccgagccacctgctggctagc
cgggacatcagtaagactagcctggataactactcagacaccaccagctacgtgagcagt
gtagcctccaccagctcagacaggatcccctctgcttatcctgctggcctgtcttccgat
aggcataaaaagagggctggccagaacgccttaaaattcatccgccagtacccctttgcc
cacccagccatctactccctgctcagcgggaggacacttgtggtcctgggggaagatgag
accatagtcaggaagcttgtgactgcactggctatctttgtccccagctatggctgctac
gctaagcctgtgaaacattgggcctcctcccctttgcacattatggattttcagaagtgg
aagcttattggcttgcagagagtggcctcccctgccggtgccggtaccctccatgccctg
agccgctacagccgctacacgagcatcctggaccttgacaacaaaaccctgcgctgcccc
ctttacagaggcaccctggtgccccgcctggcagaccaccgcacacagatcaagcggggc
agcacctactacctgcatgtccagagcatgctcacccagctctgctccaaggccttcctc
tacaccttctgccaccacctgcacctgcctacccacgacaaggagacagaggagctggta
gccagccgccaggcgagcttcctaaagctgaccctgggtctggtgaatgaggatgtcagg
gtggtccagtacctggctgagctgctgaagctgcactacatgcaggaatctccagggacc
agccaccccatgctcaggtttgactatgtccccagctttttgtataaaatctga

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