KEGG   Pongo pygmaeus (Bornean orangutan): 129023107
Entry
129023107         CDS       T10128                                 
Symbol
RBX1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1 isoform X1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
ppyg  Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03420  Nucleotide excision repair
ppyg04066  HIF-1 signaling pathway
ppyg04110  Cell cycle
ppyg04114  Oocyte meiosis
ppyg04120  Ubiquitin mediated proteolysis
ppyg04141  Protein processing in endoplasmic reticulum
ppyg04310  Wnt signaling pathway
ppyg04350  TGF-beta signaling pathway
ppyg04710  Circadian rhythm
ppyg05170  Human immunodeficiency virus 1 infection
ppyg05200  Pathways in cancer
ppyg05211  Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:ppyg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    129023107 (RBX1)
   04120 Ubiquitin mediated proteolysis
    129023107 (RBX1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    129023107 (RBX1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    129023107 (RBX1)
   04350 TGF-beta signaling pathway
    129023107 (RBX1)
   04066 HIF-1 signaling pathway
    129023107 (RBX1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    129023107 (RBX1)
   04114 Oocyte meiosis
    129023107 (RBX1)
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    129023107 (RBX1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    129023107 (RBX1)
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    129023107 (RBX1)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    129023107 (RBX1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ppyg04121]
    129023107 (RBX1)
   03400 DNA repair and recombination proteins [BR:ppyg03400]
    129023107 (RBX1)
Enzymes [BR:ppyg01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     129023107 (RBX1)
Ubiquitin system [BR:ppyg04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   129023107 (RBX1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     129023107 (RBX1)
   Cul2 complex
     129023107 (RBX1)
   Cul3 complex
     129023107 (RBX1)
   Cul4 complex
     129023107 (RBX1)
   Cul7 complex
     129023107 (RBX1)
   Cul8 complex
     129023107 (RBX1)
   Cul9 complex
     129023107 (RBX1)
DNA repair and recombination proteins [BR:ppyg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      129023107 (RBX1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      129023107 (RBX1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 129023107
NCBI-ProteinID: XP_054325583
LinkDB
Position
23:51879186..51901681
AA seq 108 aa
MAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggcagcgatggatgtggataccccgagcggcaccaacagcggcgcgggcaagaag
cgctttgaagtgaaaaagtggaatgcagtagccctctgggcctgggatattgtggttgat
aactgtgccatctgcaggaaccacattatggatctttgcatagaatgtcaagctaaccag
gcgtccgctacttcagaagagtgtactgtcgcgtggggagtctgtaaccatgcttttcac
ttccactgcatctctcgctggctcaaaacacgacaggtgtgtccattggacaacagagag
tgggaattccaaaagtatgggcactag

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