Pongo pygmaeus (Bornean orangutan): 129024248
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Entry
129024248 CDS
T10128
Symbol
TRPC5
Name
(RefSeq) short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg04360
Axon guidance
ppyg04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
129024248 (TRPC5)
09158 Development and regeneration
04360 Axon guidance
129024248 (TRPC5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ppyg01009
]
129024248 (TRPC5)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ppyg04040
]
129024248 (TRPC5)
Protein phosphatases and associated proteins [BR:
ppyg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129024248 (TRPC5)
Ion channels [BR:
ppyg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
129024248 (TRPC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
LEH
Motif
Other DBs
NCBI-GeneID:
129024248
NCBI-ProteinID:
XP_054327068
LinkDB
All DBs
Position
X:complement(116002725..116325335)
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AA seq
974 aa
AA seq
DB search
MAQLYYKKVNHSPYRDRIPLQIVRAETELSAEEKAFLNAVEKGDYATVKQALQEAEIYYN
VNINCMDPLGRSALLIAIENENLEIMELLLNHSVYVGDALLYAIRKEVVGAVELLLSYRR
PSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQKRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAE
YEELSQQCKLFAKDLLDQARSSRELEIILNHRDDHSEELDPQKYHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLFI
KKPFIKFICHTASYLTFLFMLLLASQHIVRTDLHVQGPPPTVVEWMILPWVLGFIWGEIK
EMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETRAIDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPP
FNIIPSPKSFLYLGNWFNNTFCPKRDPDGRRRRRNLRSFTERNADSLIQNQHYQEVIRNL
VKRYVAAMIRNSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKHPRRSFSTSSTELSQ
RDDNNDGSGGARAKSKSVSFNLGCKKKTCHGPPLIRTMPRSSGAQGKSKAESSSKRSFMG
TSLKKLGLLFSKFNGHMSEPSSEPMYTISDGIVQQHSMWQDIRYSQMEKGKAEACSQSEI
NLSEVELGEVQGAAQSSECPLACSSSLHCASSICSSNSKLLDSSEDVFETWGEACDLLMH
KWGDEQEEQVTTRL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcccaactgtactacaaaaaggtcaaccactcaccgtacagagaccgcatccccctg
caaattgtgagggctgagacagagctctctgcggaggagaaggccttcctcaacgctgtg
gagaagggggactatgccactgtgaagcaggcccttcaggaggctgagatctactataat
gttaacatcaactgcatggaccccctgggccggagtgccctgctcattgccattgagaac
gagaacctggagatcatggagctactgctgaaccacagtgtgtatgtgggtgatgcattg
ctctatgccatacgcaaggaagtggtgggcgctgtggagcttctgctcagctacaggcgg
cccagcggagagaagcaggtccccactctgatgatggacacgcagttctctgaattcaca
ccggacatcactcccattatgctggctgcccacaccaacaactacgaaatcatcaaattg
cttgtccaaaaacgggtcactatcccacggccccaccagatccgctgcaactgtgtggag
tgtgtgtctagttcagaggtagacagcctgcgccactctcgctcccgactgaacatctat
aaggctctggcgagcccctcactcattgccttatcaagcgaggaccccatcctaactgcc
ttccgtctaggctgggagctcaaggagctcagcaaggtggagaatgagttcaaggccgag
tatgaggagctctctcagcagtgcaagctctttgccaaagacctgctggaccaagctcgg
agctccagggaactggagatcatcctcaaccatcgagatgaccacagtgaagagcttgac
cctcagaagtaccatgacctggccaagttgaaggtggcaatcaaataccaccagaaagag
tttgttgctcagcccaactgccaacagttgcttgccaccctgtggtatgacggcttccct
ggatggcggcggaaacactgggtagtgaagcttctaacctgcatgaccattgggttcctg
tttcccatgctgtctatagcctacctgatctcacccaggagcaaccttgggctgttcatc
aagaaaccctttatcaagtttatctgccacacagcatcctatttgaccttcctctttatg
cttctcctggcttctcagcacattgtcaggacagaccttcatgtacaggggcctccccca
actgtcgtggaatggatgatattgccttgggttctaggtttcatttggggtgagattaag
gaaatgtgggatggtggatttactgaatacatccatgactggtggaacctgatggatttc
gcaatgaactccctctacctggcaactatttctttgaagattgtggcctatgtgaagtat
aatggttctcgtccaagggaggaatgggaaatgtggcacccgactctaattgcggaagca
ctcttcgcaatatccaacattttaagttcgttgcgtctcatatccctgttcacagccaac
tcccacttaggacctctgcagatctctttgggacgcatgctgcttgatatcctcaaattc
ctctttatctactgcctggtactactagcttttgccaatggactgaaccagctttacttc
tattatgaaaccagagctatcgatgagcctaacaactgcaaggggatccgatgtgagaaa
cagaacaatgccttctccacgctctttgagactcttcagtcactcttctggtctgtattt
ggccttttaaatctatatgtcaccaatgtgaaagccagacacgaattcaccgagtttgta
ggagctaccatgtttggaacatacaacgtcatctccctggtagtgctgctgaacatgctg
attgctatgatgaacaactcctatcagcttattgccgatcatgctgatatcgagtggaag
tttgcaaggacgaagctctggatgagttactttgatgaaggtggcaccttgccacctcct
ttcaacatcatccccagccccaagtcatttctataccttggtaactggttcaacaacacc
ttctgccccaaaagagaccctgatggtagacggagaaggcgcaacttgagaagcttcaca
gaacgcaatgctgacagcctgatacaaaatcaacattatcaggaagttatcaggaattta
gtcaaaagatatgtggctgctatgataagaaattccaaaacaaatgaggggcttacagaa
gaaaattttaaggaattaaagcaagacatctccagctttcggtatgaagtgcttgacctc
ttgggaaatagaaaacatccaaggagaagcttttccactagcagcactgaactctctcag
agagacgataataatgatggcagtggtggggctcgggccaaatccaagagtgtctctttt
aatttaggctgcaagaaaaagacttgccatgggccacctctcatcagaaccatgccaagg
tccagtggtgcccaaggaaagtcaaaagctgagtcatcaagcaaacgctccttcatgggt
acttctctcaagaaactgggtctcctattctccaaatttaacggtcatatgtctgaaccc
agttcagagccaatgtacacaatttctgatggaattgttcagcagcactctatgtggcag
gacatcagatattctcagatggagaaagggaaagcagaggcctgttctcaaagtgaaatt
aacctcagtgaggtagaattaggtgaagtccagggcgctgctcagagcagtgaatgccct
ctagcctgttccagctctcttcactgtgcatccagcatctgctcctcaaattctaaactt
ttagactcctcagaggatgtatttgaaacttggggagaggcttgtgacttgctcatgcac
aaatggggtgatgaacaggaagaacaagttacaactcgcctctaa
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