Pongo pygmaeus (Bornean orangutan): 129029750
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Entry
129029750 CDS
T10128
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X3
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg00310
Lysine degradation
ppyg01100
Metabolic pathways
ppyg04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
129029750 (SETDB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
129029750 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppyg03036
]
129029750 (SETDB1)
Enzymes [BR:
ppyg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
129029750 (SETDB1)
Chromosome and associated proteins [BR:
ppyg03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
129029750 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
129029750 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5604
Tudor_4
SET
Tudor_5
MBD
Pre-SET
Chromo_MORC2_6th
DUF4537
Chromo
Motif
Other DBs
NCBI-GeneID:
129029750
NCBI-ProteinID:
XP_054330554
LinkDB
All DBs
Position
1:complement(99494447..99532220)
Genome browser
AA seq
1292 aa
AA seq
DB search
MSSLPGCIGLDAATATVESEEIAELQQAVVEELGISMEELRHFIDEELEKMDCVQQRKKQ
LAELETWVIQKESEVAQVDQLFDDASRAVTNCESLVKDFYSKLGLQYRDSSSEDESSRPT
EIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQDL
HKGTLSQMSGELSKDGDLIVSMRILGKKRTKTWHKGTLIAIQTVGPGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYVTAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASALEKKQGQLRTRP
NMGAVRSKGPVVQYTQDLTGTGTQFKPVEPPQPTAPPAPPFLPAPPLSPQAGDSESLESQ
LAQSRKQVAKKSTSFRPGSVGSGHSSPTSPALSENVSGGKPGINQTYRSPLGSTASAPAP
SALPAPPAPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRVRPMRNEQYRGKNP
LLVPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETGCDFLFLEMFC
LDPYVLVDRKFQPYKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKERIPGKGVFI
NTGPEFLVGCDCKDGCRDKSKCACHQLTIQATACTPGGQINPNSGYQYKRLEECLPTGVY
ECNKRCKCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTD
DFADKEGLEMGDEYFANLDHIESVENFKEGYESDAPCSSDSSGVDLKDQEDGNSGTEDPE
ESNDDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSETTSKDSHPPDLGPPHIPV
PPSIPVGGCNPPSSEETPKNKVASWLSCNSVSEGGFADSDSHSSFKTNEGGEGRAGGSRM
EAEKASTSGLGIKDEGDIKQAKKEDPDDRNKMSVVTESSRNYGYNPSPVKPEGLRRPPSK
TSMHQSRRLMASAQSNPDDVLTLSSSTESEGESGTSRKPTAGQTSATAVDSDDIQTISSG
SEGDDFEDKKNMTGPMKRQVAVKSTRGFALKSTHGIAIKSTNMASVDKGESAPVRKNTRQ
FYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGT
ELTWDYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccttcctgggtgcattggtttggatgcagcaacagctacagtggagtctgaa
gagattgcagagctgcaacaggcagtggttgaggaactgggtatctctatggaggaactt
cggcatttcatcgatgaggaactggagaagatggattgtgtacagcaacgcaagaagcag
ctagcagagttagagacatgggtaatacagaaagaatctgaggtggctcaagttgaccaa
ctctttgatgatgcatcaagggcagtgactaattgtgagtctttggtgaaggacttctac
tccaagctgggactacaataccgggacagtagctctgaggacgaatcttcccggcctaca
gaaataattgagattcctgatgaagatgatgatgtcctcagtattgattcaggtgatgct
gggagcagaactccaaaagaccagaagctccgtgaagctatggctgccttaagaaagtca
gctcaagatgttcagaagttcatggatgctgtcaacaagaagagcagttcccaggatctg
cataaaggaaccttgagtcagatgtctggagaactaagcaaagatggtgacctgatagtc
agcatgcgaattctgggcaagaagagaactaagacttggcataaaggcacccttattgcc
atccagacagttgggccagggaagaaatacaaggtgaaatttgacaacaaaggaaagagt
ctactgtcggggaaccatattgcctatgattaccaccctcctgctgacaagctgtatgtg
ggcagtcgggtggtcgccaaatacaaagatgggaatcaggtctggctctatgctggcatt
gtagctgagacaccaaacgtcaaaaacaagctcaggtttctcattttctttgatgatggc
tatgcttcctatgtcacacagtcggaactgtatcccatttgccggccactgaaaaagact
tgggaggacatagaagacatctcctgccgtgacttcatagaggagtatgtcactgcctac
cccaaccgccccatggtactgctcaagagtggccagcttatcaagactgagtgggaaggc
acgtggtggaagtcccgagttgaggaggtggatggcagcctagtcaggatcctcttcctg
gatgacaaaagatgtgagtggatctatcgaggctctacacggctggagcccatgttcagc
atgaaaacatcctcagcctctgcactggagaagaagcaaggacagctcaggacacgtcca
aatatgggtgctgtgaggagcaaaggccctgttgtccaatacacacaggatctgaccggt
actggaacccagttcaagccagtggaacccccacagcctacagctccacctgccccacct
ttcctacctgctccacctctgtccccccaagcaggtgacagtgaaagcttggaaagccag
cttgcccagtcacggaagcaggtagccaaaaagagcacgtcctttcgaccaggatctgtg
ggctctggtcattcctcccctacatctcctgcactcagtgaaaatgtctctggtgggaaa
cctgggatcaaccagacatatagatcacctttaggctccacagcctctgccccagcaccc
tcagcactcccagcccctccagcacccccagccttccatggcatgctggagcgggcccca
gcagagccctcctaccgtgctcccatggagaagcttttctacttacctcatgtctgcagc
tatacctgtctgtctcgagtcagacctatgaggaatgagcagtaccggggcaagaaccct
ctgctggtcccattactatatgacttccggcggatgacagcccggcgtcgagttaaccgc
aagatgggctttcatgttatctataagacaccttgtggtctctgccttcggacaatgcag
gaaatagaacgctaccttttcgagactggttgtgacttcctcttcctggagatgttctgt
ttggatccatatgttcttgtggaccgaaagtttcagccctataagcctttttactatatt
ttggacatcacttatgggaaggaagatgttcccctatcctgtgtcaatgagattgacaca
acccctccaccccaggtggcctacagcaaggaacgtatcccgggcaagggtgttttcatt
aacacaggccctgaatttctggttggctgtgactgcaaggatgggtgtcgggacaagtcc
aagtgtgcctgccatcaactaactatccaggctacagcctgtaccccaggaggccaaatc
aaccctaactctggctaccagtacaagagactagaagagtgtctacccacaggggtatat
gaatgtaacaaacgctgcaaatgtgacccaaacatgtgcacaaaccggttggtgcaacat
ggactacaagttcggctacagctattcaagacacagaacaagggctggggtatccgctgc
ttggatgacattgccaaaggctcttttgtctgtatttatgcaggcaaaatcctgacagat
gactttgcagacaaggagggtctggaaatgggtgatgagtactttgcaaatctggaccat
atcgagagcgtggagaacttcaaagaaggatatgagagtgatgccccctgttcctctgac
agcagtggtgtagacttgaaggaccaggaagatggcaacagcggtacagaggaccctgaa
gagtccaatgatgatagctcagatgataacttctgtaaagatgaggacttcagcaccagt
tcagtgtggcggagctatgctacccggaggcagacccggggccagaaagagaacggactc
tctgagacaacttccaaggactcccatcccccagatcttggacccccacatattcctgtt
cctccctcaatccctgtaggtggctgcaatccaccttcctccgaagagacacccaagaac
aaggtggcctcatggttgagctgcaatagtgtcagtgaaggtggttttgctgactctgat
agccattcatccttcaagactaatgaaggtggggagggccgggctgggggaagccgaatg
gaggctgagaaggcctccacctcaggactaggcatcaaggatgagggagacatcaaacag
gccaagaaagaggaccctgacgaccgaaacaagatgtcagtagttactgaaagctctcga
aattacggttacaatccttctcctgtgaagcctgaaggacttcgccgcccacctagtaag
actagtatgcatcaaagccgaagactcatggcttctgctcagtctaaccctgatgatgtc
ctgacactgtccagcagcacagaaagtgagggggaaagtgggaccagccgaaagcccact
gctggtcagacttcggctacagcggttgacagtgatgatatccagaccatctcctctggc
tctgaaggggatgactttgaggacaagaagaacatgactggtccaatgaagcgtcaagtg
gcagtaaaatcaacccgaggctttgctcttaaatcaacccatgggattgcaattaaatca
accaacatggcttctgtggacaagggggagagcgcacctgttcgtaagaacacacgccaa
ttctacgatggcgaggaatcttgctacatcatcgatgccaagcttgaaggcaacctgggc
cgctacctcaatcacagttgcagccccaacctgtttgtccagaatgtcttcgtggatacc
catgatcttcgcttcccctgggtggccttctttgccagcaaaagaatccgggctgggaca
gaacttacttgggactacaactacgaggtgggcagtgtggaaggcaaggagctgctctgt
tgctgtggggccattgaatgcagaggacgtcttctttag
DBGET
integrated database retrieval system
