KEGG   Pongo pygmaeus (Bornean orangutan): 129036381
Entry
129036381         CDS       T10128                                 
Symbol
AFF4
Name
(RefSeq) AF4/FMR2 family member 4 isoform X1
  KO
K15185  AF4/FMR2 family member 4
Organism
ppyg  Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ppyg00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    129036381 (AFF4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppyg03021]
    129036381 (AFF4)
Transcription machinery [BR:ppyg03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     129036381 (AFF4)
SSDB
Motif
Pfam: AF-4 AFF4_CHD AF4_int
Other DBs
NCBI-GeneID: 129036381
NCBI-ProteinID: XP_054343380
LinkDB
Position
4:complement(137398340..137486739)
AA seq 1163 aa
MNREDRNVLRMKERERRNQEIQQGEDAFPPSSPLFAEPYKVTSKEDKLSSRIQSMLGNYD
EMKDFIGDRSIPKLVAIPKPTVPPSADEKSNPNFFEQRHGGSHQSSKWTPVGPAPSTSQS
QKRSSGLQSGHSSQRTSAGSSSGTNSSGQRHDRESYNSSGSSSRKKGQHGSEHSKSRSSS
PGKPQAVSSLSSSHSRSHGNDHHSKEHQRSKSPRDPDANWDSPSRVPFSSGQHSTQSFPP
SLMSKSNSMLQKPTAYVRPMDGQESMEPKLSSEHYSSQSHGNSMTELKPSSKAHLTKLKI
PSQPLDASASGDVSCVDEILKEMTHSWPPPLTAIHTPCKTEPSKFPFPTKESQQSNFGPG
EQKRYNPSKTSNGHQSKSMLKDDLKLSSSEDSDGEQDCDKTMPRSTPGSNSEPSHHNSEG
ADNSRDDSSSHSGSESSSGSDSESESSSSDSEANEPSQSASPEPEPPPTNKWQLDNWLNK
VNPHKVSPASSVDSNIPSSQGYKKEGREQGTGNSYTDTSGPKETSSATPGRDSKTIQKGS
ESGRGRQKSPAQSDSTTQRRTVGKKQPKKAEKAAAEEPRGGLKIESETPVDLASSMPSSR
HKAATKGSRKPNIKKESKSSPRPTAEKKKYKSTSKSSQKSREIIETDTSSSDSDESESLP
PSSQTPKYPESNRTPVKPSSVEEEDSFFRQRMFSPMEEKELLSPLSEPDDRYPLIVKIDL
NLLTRIPGKPYKETEPPKGEKKNVPEKHTREAQKQASEKVSNKGKRKHKNEDDNRASESK
KPKTEDKNSAGHKPSSNRESSKQSAAKEKDLLPSPAGPVPSKDPKTEHGSRKRTISQSSS
LKSSSNSNKETSGSSKNSSSTSKQKKTEGKTSSSSKEVKEKAPSSSSNCPPSAPTLDSSK
PRRTKLVFDDRNYSADHYLQEAKKLKHNADALSDRFEKAVYYLDAVVSFIECGNALEKNA
QESKSPFPMYSETVDLIKYTMKLKNYLAPDATAADKRLTVLCLRCESLLYLRLFKLKKEN
ALKYSKTLTEHLKNSYNNSQAPSPGLGSKAVGMPSPVSPKLSPGNSGNYSSGASSASASG
SSVTIPQKIHQMAASYVQVTSNFLYATEIWDQAEQLSKEQKEFFAELDKVMGPLIFNASI
MTDLVRYTRQGLHWLRQDAKLIS
NT seq 3492 nt   +upstreamnt  +downstreamnt
atgaaccgtgaagaccggaatgtgctgcgtatgaaagaacgggaaaggcggaatcaggaa
attcagcagggcgaagacgccttcccacctagctctcctctctttgcagagccatacaaa
gttactagcaaagaagataagttatcaagtcgtattcagagtatgcttggaaactacgat
gaaatgaaggatttcataggagacagatctataccaaagcttgttgcaattcccaagcct
acagtaccaccatcagcagatgaaaaatctaacccaaatttctttgagcagagacatgga
ggctctcatcagagtagcaaatggactccagtaggacctgcacccagcacttctcagtct
cagaaacggtcctcaggcttacagagtggacatagtagccagcggaccagtgcaggtagc
agtagtggcactaacagtagtggtcagaggcacgaccgtgagtcatataacagtagtggg
agcagtagccggaaaaaaggccagcatggatcagaacactccaaatcacgttcttccagc
cctggaaaaccccaggctgtttcttcattaagttctagtcattccaggtctcacgggaat
gatcaccatagcaaggaacatcaacgctccaaatcacctcgggaccctgatgcaaactgg
gattctccttcccgtgtacctttttcaagtgggcagcactcaactcaatctttcccaccc
tcattgatgtcaaagtccaattcaatgttacagaaacccactgcctatgtgcggcccatg
gacggacaggagtccatggaaccaaagctgtcctctgagcactacagcagccaatcccat
ggcaacagcatgactgagctgaagcccagcagcaaagcacatctcaccaagctgaaaata
ccttcccaaccactggatgcatcagcttctggtgatgtgagctgtgtggatgaaatctta
aaagagatgacgcattcatggccaccccctctaacggctattcatacaccatgcaaaaca
gaaccttccaaatttccttttccaactaaggagtctcagcagtccaattttggccctgga
gaacaaaaaagatataatccttctaaaacttcaaatgggcaccagtctaaatctatgtta
aaagatgacttaaaactaagcagcagtgaagacagtgatggggaacaggattgtgataag
acaatgccgaggagtacaccaggaagtaactctgaaccttcacaccataatagtgaagga
gcagataactccagggatgattctagtagccacagtggatctgaaagcagctctggatct
gactcagagagtgaaagtagttccagtgacagtgaggcaaatgagccatcccagagtgca
tctcccgagcctgaacccccaccaacaaacaaatggcaacttgataattggctgaataaa
gtgaacccacataaagtgtcacccgcttcttcagtggacagtaacatcccatcatctcaa
ggctacaaaaaggaaggccgagagcagggcactgggaatagttacactgacacaagtgga
cctaaagaaacgagttctgctactcctggacgagactccaaaaccatccaaaagggatca
gaaagtgggcgtgggaggcagaaatctcctgcgcagagtgacagcacaacacagagaaga
actgtaggcaaaaaacaacccaaaaaggctgagaaggcagctgctgaagagcctcgtgga
ggcctgaagatagaaagtgaaacccctgtagacttggctagcagcatgccctccagcaga
cacaaagcagccaccaaaggctcaaggaaacccaatataaagaaggagtctaagtcttcc
cctcgacctacagcagagaaaaagaaatataagtcaacaagtaaatcttcccagaaatca
agggaaatcatagaaacagatacctcatcctcggattcagatgaaagcgagagccttcct
ccttcctcacaaactcctaagtaccccgagagcaataggactcctgttaaaccctcctca
gtggaggaagaagatagcttttttcggcaacgaatgttctctcctatggaagagaaggaa
cttctttcacccctcagtgagcctgatgacaggtacccacttattgtgaagattgacctg
aatcttttgactagaataccaggaaagccttacaaagaaacagagccgcccaagggggaa
aagaaaaatgtgccagaaaagcacacgagagaggctcagaaacaagcctcagaaaaagtt
tccaacaaaggcaagaggaagcataagaatgaagatgataaccgagccagtgagagcaag
aaacccaaaacggaggacaagaattcagcaggccataagccatccagcaacagagagtcg
tctaagcagagtgctgcaaaagaaaaggatttgttgccttctcctgctgggcctgttcct
tcaaaagatccaaaaacagagcatggctctcggaagaggactattagtcagtcttcttct
ttaaagtcaagcagtaacagcaacaaggagacgagtggcagtagcaaaaacagttcctcc
acatcaaagcagaagaagaccgaagggaagacttccagtagctccaaggaggttaaggaa
aaggctccaagtagctcctctaactgtcctccatctgcgccaactcttgattcttctaag
cctcggagaacaaagcttgtctttgatgacagaaattattcagcagaccattatttgcaa
gaagcaaaaaagctaaagcacaatgcagatgcattgtctgataggtttgagaaagctgta
tactatcttgatgctgtggtatctttcattgaatgtgggaatgcattagagaagaatgct
caggaatccaaatccccattccctatgtattcagagacggtggatctcatcaaatacact
atgaagctaaagaattacttggcaccagatgctacagctgcagataaacgactcacagta
ctttgcctgcgatgcgagtctttgctgtacctgaggcttttcaaactgaagaaggaaaat
gctctgaagtactcaaagacactgacagagcacctgaagaattcttataataattctcaa
gcaccatcgcctggcttgggaagcaaagctgtggggatgccttcccctgtttctccaaag
ctgtcaccaggcaattcaggaaattattcatctggggccagtagtgcttctgcaagtggt
tcttcagtgaccattccacagaagatccaccagatggcagccagctatgttcaggtcaca
tccaacttcctctatgccaccgaaatttgggaccaagctgaacagctttccaaagagcaa
aaagagttctttgctgaactggataaagtaatgggccctctcatctttaatgcaagtatc
atgacagatctagttcgttatacccggcagggactgcactggcttcgccaggatgccaag
ttgatatcttga

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