Pongo pygmaeus (Bornean orangutan): 129044349
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Entry
129044349 CDS
T10128
Symbol
C9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog isoform X1
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg04140
Autophagy - animal
ppyg05014
Amyotrophic lateral sclerosis
ppyg05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129044349 (C9orf72)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
129044349 (C9orf72)
05022 Pathways of neurodegeneration - multiple diseases
129044349 (C9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppyg04131
]
129044349 (C9orf72)
Membrane trafficking [BR:
ppyg04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
129044349 (C9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
129044349
NCBI-ProteinID:
XP_054358211
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All DBs
Position
13:29790385..29817287
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AA seq
481 aa
AA seq
DB search
MSTLCPPPSPAVAKTEIALSGESPLLAATFAYWDNILGPRVRHIWAPKTEQLLLSDGEIT
FLANHTLNGEILRNAESGAIDVKFFVLSEKGVIIVSLIFDGNWNGDRSTYGLSIILPQTE
LSFYLPLHRVCVDRLTHIIRKGRIWMHKERQENVQKIILEGTERTEDQGQSIIPMLTGEV
IPVMELLSSMKSHSVPEEIDIADTVLNDDDIGDSCHEGFLLNAISSHLQTCGCSVVVGSS
ADKVNKIVRTLCLFLTPAERKCSRLCEAESSFKYESGLFVQGLLKDSTGSFVLPFRQVMY
APYPTTHIDVDVNTVKQMPPCHEHIYNQRRYMRSELTAFWRATSEEDMAQDTIIYTDESF
TPDLNIFQDVLHRDTLVKAFLDQVFQLKPGLSLRSTFLAQFLLVLHRKALTLIKYIEDDT
QKGKKPFKSLRNLKIDLDLTAEGDLNIIMALAEKIKPGLHSFIFGRPFYTSVQERDVLMT
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactctttgcccaccaccgtctccagctgttgccaagacagagattgctttaagt
ggcgaatcacctttattagcagctacttttgcttactgggacaatattcttggtcctaga
gtaaggcacatctgggctccaaagacagaacagttacttctcagtgatggagaaataact
tttcttgccaaccacactctaaatggagaaatccttcgaaatgcagagagtggtgctata
gatgtaaagttttttgtcttgtctgaaaagggagtgattattgtttcattaatctttgat
ggaaactggaatggggatcgcagcacatatggactatcaattatacttccacagacagaa
cttagtttctacctcccacttcatagagtgtgtgttgatagattaacacatataatccgg
aaaggaagaatatggatgcataaggaaagacaagaaaatgtccagaagattatcttagaa
ggcacagagagaacggaagatcagggtcagagtattattccaatgcttactggagaagtg
attcctgtaatggaactgctttcatctatgaaatcacacagtgttcctgaagaaatagat
atagctgatacagtactcaatgatgatgatattggtgacagttgtcatgaaggctttctt
ctcaatgccatcagctcacacttgcaaacctgtggctgttccgttgtagtaggtagcagt
gcagataaagtaaataagatagtcagaacattatgcctttttctgactccagcagagaga
aaatgctccaggttatgtgaagcagaatcatcatttaaatatgagtcagggctctttgta
caaggcctgctaaaggattcaactggaagctttgtgctgcctttccggcaagtcatgtac
gctccatatcccaccacacacatagatgtggatgtcaatactgtgaagcagatgccaccc
tgtcatgaacatatttataatcagcgtagatacatgagatccgagctgacagccttctgg
agagccacttcagaagaagacatggctcaggatacgatcatctacactgacgaaagcttt
actcctgatttgaatatttttcaagatgtcttacacagagacactctagtgaaagccttc
ctggatcaggtctttcagctgaaacctggtttatctctcaggagtactttccttgcacag
tttctacttgtccttcacagaaaagccttgacactaataaaatacatagaagacgatacg
cagaagggaaaaaagccctttaaatctcttcggaacctgaagatagaccttgatttaaca
gcagagggcgatcttaacataataatggctctggctgagaaaattaaaccaggcctacac
tcttttatctttggaagacctttctacactagtgtgcaagaacgagatgttctaatgact
ttttaa
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