Pectobacterium quasiaquaticum: IG609_008100
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Entry
IG609_008100 CDS
T08268
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
pqu
Pectobacterium quasiaquaticum
Brite
KEGG Orthology (KO) [BR:
pqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pqu03009
]
IG609_008100 (rlmC)
Enzymes [BR:
pqu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
IG609_008100 (rlmC)
Ribosome biogenesis [BR:
pqu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
IG609_008100 (rlmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_15
Cons_hypoth95
Methyltransf_12
Methyltransf_11
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
URG50447
UniProt:
A0A9Q2IAP2
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All DBs
Position
1747171..1748298
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AA seq
375 aa
AA seq
DB search
MHCARYSTGTCRSCQWLEKPYPQQLSDKQQHLEGLLQPHAVQRWLPVQPSAQSAFRNKAK
MVVSGSVERPLLGMLHRDGTAVDLCNCPLYPSSFAPVFNVLKVFIARAGLTPYNVARRRG
ELKYLLLTESTQHGTFMLRFVLRSETKLPQLRAALPWLQQQLPQLEVISVNIQPVHQAIM
EGKTEIILSDAAALAEQFNQVPLYIRPQSFFQTNPQVAAALYATARDWVAELNITSMWDL
FCGVGGFGLHCASSEMRLTGIEISAEAIACARRSAEQLGLKQVEFQALDSTQFATGKAEI
PELVLVNPPRRGIGSELCAYLSRMAPDYILYSSCNAESMAKDMTELANYRALRVQLFDMF
PHTAHYEVLTLLKRA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcattgtgcccgctacagcacgggaacctgtcgttcctgccaatggttggaaaaaccc
tacccgcagcaattgtctgataagcagcaacatcttgaaggtttgctgcaaccgcatgcc
gtgcagcgctggttgcccgtgcaaccttctgcgcagtctgcctttcgtaataaagccaaa
atggtggtgagcggcagcgtggaacgcccgctgctggggatgctgcatcgtgatggaacg
gcggtagatctctgcaattgtccactttatccgtccagttttgcgccggttttcaacgtg
cttaaagtcttcattgctcgagcagggctgacgccttataacgtggctcgacgtcgcggg
gagctgaaatacctgctgctgacggaaagtacgcagcacggtacattcatgctgcgcttt
gtcttacgctcggaaaccaagctgccgcagctgcgtgccgcattgccctggctacagcag
cagttgccgcagcttgaggtgatatccgtcaatattcagcccgtgcatcaggcgattatg
gaagggaaaacggagattatcctgagtgacgctgccgcgctggctgaacagttcaatcag
gtgccgttgtatatccgtccgcaaagctttttccagacgaaccctcaggtggcagccgcg
ctgtatgcgacggctcgcgattgggtagcagagctgaatattaccagtatgtgggatctg
ttttgtggggtagggggttttggcctgcactgtgcatcatcggagatgcgcctgacgggg
attgaaatcagcgccgaggcgatagcctgcgcgcgccgctctgcggaacagttagggttg
aagcaggtagagtttcaggctcttgattccacgcagttcgcgacaggtaaagcggaaatt
cccgagctggtgctagtcaacccgccacgccgtggtattggcagcgaactgtgtgcttac
ctgagccggatggctccggactatattctctactccagctgtaacgctgaaagcatggcg
aaagacatgacggaactagcgaattaccgtgcgctgcgcgtgcagctgttcgacatgttt
ccgcacacggcgcactatgaagtgctgacgttattgaaacgcgcttga
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