Podarcis raffonei (Aeolian wall lizard): 128400597
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Entry
128400597 CDS
T09310
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
praf04040
]
128400597 (SCN4A)
Ion channels [BR:
praf04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
128400597 (SCN4A)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
GPHH
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
128400597
NCBI-ProteinID:
XP_053218871
LinkDB
All DBs
Position
13:complement(13665761..13824266)
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AA seq
1910 aa
AA seq
DB search
MAAPPPYIPGPECLRPFTRESLQEIEKRIAEREAEKLKPKHEELHEEEKEAKPRSDLEQG
RSLPMIYGDPPPELIGVPLEDLDPFYKDQKTYILLNKGKCIFRFSATPALYMLDPFNIVR
RGAIQVLIHSLFSMFIMITILANCVFMTMSDPPVWAKDVEYTFTGIYTFESMIKILARGF
CIDNFTFLRDPWNWLDFSVIVMAYVTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVG
ALIQSVKKLSDVMILTVFCLAVFALIGLQLFMGNLRQKCVRWPPFTNDTLDGGFMGNATL
YDNSTLYDNGTLYSNETFDWDEYIHNEENFYFLEGALDALLCGNSSDAGQCPEGYLCMKA
GRNPNYGYTSYDTFSWAFLSLFRLMTQDYWENLFQLTLRAAGKTYMIFFILIIFLGSFYL
INLILAVVAMAYAEQNDATLLEEQEKEAEFQQMVEQLKKHQEEQQRLLQEQAANSSSAES
VIVEKKKTGESDQEAPSDQDGPKDCNGRVIPRLVLDRSATIDESDPAEEHETSDHNHLQV
GNQEGTGLNKRAESALSIVSNTLEELEEAHQKCPPWWYKFAHAVLVWNCCPLWVKMKNII
KLIVMDPFVDLGITICIVLNTVFMAMEHYPMTDEFNNVLNVGNLVFTGIFTAEMVLKLIA
LDPYDYFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLMRVFKLAKSWPTLNMLIK
IIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYTECVCKISSDCTLPRWHMHDFFHSF
LIVFRILCGEWIETMWDCMEVAGQTLCLIVFMMVMVIGNLVVLNLFLALLLSSFSADSLA
ASDDDGEMNNLQIAIGRITRGIDFVKKHALLLLHRQLKEKKAEPPAEDQEDSKKENFVLN
HLDTGQDFKPDYMDGIALDGIAMDGVARKEPRIDELDHMNFINNPHLTIHVPIASEESDL
YDETDTGEETAEDTKKPLSDGTESSICSTVDYKPPDPEEEVAVAEEDAENEPEECFTEAC
VRRCPCLYVDVKTEKGEKWWNLRKTCFKIVEHNWFETFIILMILLSSGALAFEDIYIERR
RTIRIILEYADKVFSYVFVIEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSLISLTANWMG
YSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMG
VNLFAGKYYRCINTTTGDYFELSVVNNKSDCMTLLDVYNATDVRWVNVKVNFDNVGMGYL
SLLQVATFKGWMDIMYAAVDSREVEEQPEYEVNLYMYIYFVIFIIFGAFFTLNLFIGVII
DNFNQQKKKFGGKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKYQAMIFDFVTQQAF
DIVIMILICLNMVTMMVETDDQSETKINILFQINLIFIVIFTAECFLKMIALRYYFFTVG
WNIFDFVVVIISIIGLVLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFAL
MMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKKESGVDDIFNFETFGNSIICLFQITTS
AGWDGLLNPILNSGPPDCDPELQNPGSHVKGDCGNPAIGILFFCSYIIISFLIVVNMYIA
IILENFNVATEESSEPLCEDDFEMFYETWEKFDPDATQFIDYAILSDFADTLQPPLRIAK
PNKIKLITLDLPMVPGDKIHCLDILFALTKEVLGDSGEMDALKQSMEEKFMAANPSKVSY
EPITTTLKRKQEEVCATKIQRAFRRYLLRRSMKQASYMYRHSQDEETLLEGAPEKEGLIA
KKMNEIYGSSGSEVDIQVSSETSPPIELKPVASAETTDDPSKTKREADRGGKEEGDPGKT
KEEEDPGKKEEDDPRKTKEKKEDSGGTKEDDPSKSKEKAGTKRGVKESFV
NT seq
5733 nt
NT seq
+upstream
nt +downstream
nt
atggccgccccgccaccatacatccctggtccagagtgcctgcgcccattcacccgcgag
tccctccaggagatagagaaacggattgcggagcgagaagccgagaagttgaagcctaag
catgaggagcttcacgaggaagaaaaggaggccaaaccccggagtgacctggagcaaggg
agaagtctcccaatgatttatggggaccctcccccagagctcatcggggtgcctctagaa
gacttggacccattctacaaagatcagaaaacatacatcctcctcaacaaaggaaagtgc
attttccggttcagtgccactcctgctctctatatgttggatcctttcaatattgtccgg
agaggtgccatccaagtgcttatacattcattattcagcatgtttatcatgatcaccatc
ttagccaactgtgtcttcatgaccatgagtgacccgccagtgtgggccaaggatgtggaa
tacacttttactggcatctacacctttgagtctatgatcaagatattggcccggggattc
tgcattgacaactttacattcctgagagatccatggaactggctggatttcagtgtcatc
gttatggcctacgtcacagagttcgtagacttgggcaacatctctgctctacggacattc
cgggttctccgggcacttaaaaccatcacagtcattccagggctgaaaactattgtgggt
gcgttgatccagtccgtgaagaagctctccgatgtcatgatcctcacagtattctgcttg
gccgtcttcgccctcattggcctgcagcttttcatggggaacctgcggcaaaagtgtgtg
cggtggccgccgttcaccaacgacacactggatggcggtttcatgggcaacgccactctg
tacgacaacagcaccctgtatgacaacggcaccctgtatagcaacgagacctttgactgg
gatgagtacatccacaacgaagaaaatttttatttccttgagggtgcgcttgatgccctg
ctctgtgggaacagctctgacgcagggcaatgcccagaaggctatctctgcatgaaagct
ggccggaacccaaactacggctacacaagctatgataccttcagctgggccttcctctcc
ctgttccgtctcatgactcaagactactgggagaacctctttcaactgaccttgcgagcg
gctgggaaaacgtacatgatctttttcattctgatcatattcttgggatccttctacctc
atcaacctgatcctggctgtggttgcgatggcttatgccgagcagaacgatgcaactctg
ctggaggagcaggagaaagaggcagagttccagcagatggtggagcagctgaaaaagcac
caggaggagcaacaaagactgcttcaagagcaagcagcaaacagcagctctgcggagagc
gttattgtggagaaaaagaagacgggggagtccgatcaagaggcgcctagtgatcaagat
gggccaaaagactgtaacggccgcgtcatcccacgcttggtgctggaccggtcagctaca
atagacgagtcagatccagcggaggagcatgagacgtctgaccacaaccacctccaagta
ggaaaccaagaagggacaggcttgaataaacgagcagagagtgccctcagcatagtctcc
aacacactggaagaactggaagaggcgcaccagaaatgtccgccgtggtggtacaagttt
gcccacgcggtcctcgtgtggaattgctgcccgctctgggtgaagatgaagaacataatc
aagctcattgtcatggacccctttgttgatctggggatcactatctgcattgtcctcaac
accgtcttcatggccatggaacactacccgatgacagacgaattcaacaatgttttgaat
gtggggaacctggtcttcacggggatattcactgcagagatggtgctgaagctgattgct
ctggacccctacgattacttccaggttggatggaacatctttgacagcatcatcgtcact
ctcagcttggttgagctcggcctcgccaacgtccagggcctgtctgtgctacgctccttc
cgtctgatgagagtgttcaagctcgccaaatcctggccaacgctcaacatgctgatcaag
atcattggcaactcggtgggtgccctgggcaacctcacccttgtgctggccatcatcgtt
ttcatcttcgccgtggtggggatgcagttgtttgggaagagctacactgagtgcgtctgc
aagatcagcagcgactgcacgctgccgcgctggcacatgcacgacttcttccactccttc
ctgatcgtcttccgcatcctctgcggggagtggatcgagaccatgtgggactgcatggaa
gtggcggggcagaccttgtgcctcattgtcttcatgatggtcatggtcattgggaacctg
gtggtgctcaaccttttcttagctttgctgctcagctccttcagcgccgacagcctggca
gcatctgatgacgatggcgagatgaacaacttgcagatcgcaattggcagaatcacccgg
gggatcgactttgtgaaaaaacatgccctcctcctgcttcaccggcagctgaaggagaag
aaggccgagccccctgccgaagaccaggaagatagcaagaaggagaactttgtcctcaac
catttggacacaggccaggacttcaaacccgactacatggatgggatagccctggatggg
atagccatggacggggtagccaggaaagagccacgcatcgatgaactggaccatatgaac
ttcatcaacaatcctcacctgaccattcatgtcccgatagcctcggaggagtctgacttg
tatgacgaaaccgacacaggagaagagactgccgaggacaccaagaagcctctttcagat
gggaccgagtcgtccatatgcagcactgttgattataagcccccagaccctgaggaggag
gtagctgtggctgaagaggatgccgagaatgagccagaggaatgcttcactgaagcctgt
gtccggagatgcccttgcctctacgttgacgtcaagacagagaagggggagaagtggtgg
aacctccggaagacgtgtttcaagattgtggagcacaactggtttgagacgttcatcatc
ctcatgatcctgcttagcagcggagccctggctttcgaagacatctacatagagcgtcgt
cggaccatccgcatcatcttggaatatgctgacaaggtcttctcgtatgtttttgttatc
gagatgcttctcaagtgggtggcctatgggttcaaggtctacttcaccaatgcctggtgc
tggctggacttcctcattgttgacgtctccctcatcagcctgacagcaaactggatggga
tattcggagctgggggcaattaaatccctgaggacgctccgtgctctgagaccccttcgg
gctttgtccagatttgaaggcatgagggtggtcgtgaatgcccttctgggagccatccct
tccatcatgaacgtcctcttggtctgcctgatattctggctcatcttcagcattatgggg
gtcaacctcttcgcagggaagtattatcgctgcatcaataccaccacgggcgactacttc
gagctctccgtggtgaacaacaagagcgactgcatgactctcctcgacgtttacaatgcc
acggacgtccgctgggtcaacgtcaaggtcaattttgacaatgtgggcatgggatatctc
tcccttttgcaggtggccacattcaagggctggatggacatcatgtacgcagccgtcgac
tcccgtgaggttgaggagcagcccgaatacgaagtcaacctctacatgtacatctatttt
gtcatcttcatcatctttggggctttcttcactctcaaccttttcatcggcgtcatcata
gacaacttcaaccagcagaagaaaaagtttggaggaaaggacatcttcatgacagaggaa
caaaagaaatactacaacgccatgaagaagctaggctccaaaaagccacaaaaacccatc
ccaaggccccagaacaaataccaagcgatgatctttgactttgtgacccaacaagccttt
gatatagtcatcatgatcctcatttgtcttaacatggtgacgatgatggtggaaacagac
gaccaaagcgaaaccaagataaacatcctcttccaaatcaacctgatcttcattgtcatc
ttcacggccgagtgcttcctcaagatgattgccctgcggtactacttcttcacggtcggc
tggaacatctttgatttcgtcgtggtcattatctccatcataggacttgtcctctcggac
atcattgagaaatacttcgtatcgcccaccctcttcagggtcatccgcctggccagaatt
gggcgtgtcctgcggctgattcggggagccaaaggcatccggacgctcctctttgctttg
atgatgtcgctgcctgctctcttcaacattggcctcctcctcttcctggtcatgtttatc
tattccatttttgggatgtccaacttcgcttacgtgaagaaggaatctggcgtggacgac
atcttcaacttcgagacttttggcaacagcatcatctgccttttccagatcaccacgtcg
gccggttgggacggcttgctgaaccccatcttgaacagcggtcctccggactgtgacccc
gaactgcagaaccctggcagccatgtgaagggcgattgtggcaaccctgccattggcatc
ctcttcttctgcagctacatcatcatctccttcttgatagtggtcaacatgtacatcgcc
atcatcctggagaacttcaacgtcgccacggaggagagcagcgaacctctgtgtgaagac
gactttgagatgttctatgagacttgggagaagtttgaccccgacgccacgcagttcatt
gattacgccatactctcggactttgcggacaccttgcaacctccactgcggatcgctaag
cccaacaagatcaagctgatcactttggacttgcccatggttcctggggataagatacat
tgcttggacatcctctttgcactcaccaaagaagtgctgggagactcgggggaaatggat
gccctaaagcagtccatggaggagaagtttatggctgccaacccctcaaaggtctcctac
gaacccatcaccaccacactgaaaaggaagcaggaggaggtgtgtgccaccaaaatccaa
cgggcgtttcggaggtatttattaaggcgatcgatgaaacaggcctcttacatgtacagg
cacagccaggatgaggagaccctgctggaaggagcccctgagaaagaaggattgattgcg
aagaaaatgaatgaaatatatgggtcttcgggctcagaggtagacatccaagtgtcttca
gaaacatccccacctattgaacttaaaccagtcgccagcgcagagactacggacgatcct
agcaaaaccaagagagaggcggatcgtgggggaaaagaggaaggcgatcccggcaaaacg
aaggaagaggaggatcctggcaaaaaggaggaagacgaccccaggaaaacgaaagagaag
aaggaagattccggcggaacaaaggaagacgaccccagcaaaagtaaagagaaggcgggc
accaaacgtggtgtgaaagagtcatttgtataa
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