Podarcis raffonei (Aeolian wall lizard): 128402125
Help
Entry
128402125 CDS
T09310
Symbol
ACTB
Name
(RefSeq) actin, cytoplasmic 1
KO
K05692
actin beta/gamma 1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03082
ATP-dependent chromatin remodeling
praf04145
Phagosome
praf04210
Apoptosis
praf04510
Focal adhesion
praf04520
Adherens junction
praf04530
Tight junction
praf04810
Regulation of actin cytoskeleton
praf04814
Motor proteins
praf04820
Cytoskeleton in muscle cells
praf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128402125 (ACTB)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128402125 (ACTB)
09143 Cell growth and death
04210 Apoptosis
128402125 (ACTB)
09144 Cellular community - eukaryotes
04510 Focal adhesion
128402125 (ACTB)
04520 Adherens junction
128402125 (ACTB)
04530 Tight junction
128402125 (ACTB)
09142 Cell motility
04814 Motor proteins
128402125 (ACTB)
04820 Cytoskeleton in muscle cells
128402125 (ACTB)
04810 Regulation of actin cytoskeleton
128402125 (ACTB)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128402125 (ACTB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
praf03021
]
128402125 (ACTB)
03019 Messenger RNA biogenesis [BR:
praf03019
]
128402125 (ACTB)
03036 Chromosome and associated proteins [BR:
praf03036
]
128402125 (ACTB)
03029 Mitochondrial biogenesis [BR:
praf03029
]
128402125 (ACTB)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
praf04812
]
128402125 (ACTB)
04147 Exosome [BR:
praf04147
]
128402125 (ACTB)
Transcription machinery [BR:
praf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
128402125 (ACTB)
Messenger RNA biogenesis [BR:
praf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
128402125 (ACTB)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
128402125 (ACTB)
NuA4 complex
128402125 (ACTB)
Chromatin remodeling factors
BAF complex
128402125 (ACTB)
PBAF complex
128402125 (ACTB)
GBAF(ncBAF) complex
128402125 (ACTB)
SWR1 complex
128402125 (ACTB)
Mitochondrial biogenesis [BR:
praf03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
128402125 (ACTB)
Cytoskeleton proteins [BR:
praf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
128402125 (ACTB)
Exosome [BR:
praf04147
]
Exosomal proteins
Proteins found in most exosomes
128402125 (ACTB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
128402125
NCBI-ProteinID:
XP_053221992
LinkDB
All DBs
Position
14:complement(52136947..52143288)
Genome browser
AA seq
375 aa
AA seq
DB search
MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgatatcgctgccctcgtggttgacaatggctccggaatgtgcaaagccggt
tttgccggggacgacgcccctcgcgcagtgttcccctccatcgttggtcgccccagacac
cagggtgtgatggttggcatgggccagaaggacagctatgttggtgatgaggcacagagt
aaaagaggcatcttgaccctgaagtaccccattgaacacggcattgtcaccaactgggat
gacatggagaagatctggcaccacaccttctacaacgagctgagagtcgccccagaagag
catcctgtgttgctgacagaagctcccctgaaccccaaagccaacagagaaaagatgacg
cagatcatgttcgagactttcaacaccccagccatgtacgtagccatccaggccgtgctg
tccctgtacgcctccggccgcacgacaggcatcgtgatggactctggcgacggcgtcacc
cacactgtgcccatctacgaaggctacgccctgccccacgccatcctccgtctggacctg
gcgggccgcgacttgaccgactacctcatgaagatcttgaccgagagaggctacagcttc
accaccacggccgagagggaaatcgtgcgcgacatcaaagagaagctctgctacgttgcg
ctggacttcgagcaggagatggcgaccgcggcatccagttcctccctggagaagagctat
gagcttcctgacggccaagtgatcaccatcggcaacgagaggttcagatgcccagaagcc
ctcttccagccctctttcctgggtatggaatcctgcggcatccacgaaaccaccttcaac
tccatcatgaagtgcgacgtggacatccgtaaagacctgtatgccaacaccgtcctgtcc
ggcggcaccaccatgtacccaggcatcgctgacagaatgcagaaggagatcacagccctg
gcccccagcacaatgaaaatcaagatcattgctccaccagagcgcaaatactctgtctgg
attggcggttccatccttgcctccctgtcgaccttccagcagatgtggatcagcaagcag
gagtacgacgaatctgggccctccatcgtccaccgcaaatgcttctaa
DBGET
integrated database retrieval system