Podarcis raffonei (Aeolian wall lizard): 128403620
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Entry
128403620 CDS
T09310
Symbol
TRAF3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04620
Toll-like receptor signaling pathway
praf04621
NOD-like receptor signaling pathway
praf04622
RIG-I-like receptor signaling pathway
praf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
128403620 (TRAF3)
04621 NOD-like receptor signaling pathway
128403620 (TRAF3)
04622 RIG-I-like receptor signaling pathway
128403620 (TRAF3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128403620 (TRAF3)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
TRAF3_RING
zf-TRAF
Cast
zf-C3HC4
ATG16
FliJ
MPS2
Med28
Spc29
GAS
KxDL
DUF1664
Sina_ZnF
Tropomyosin
SPATA24
T3SSipB
Crescentin
BLOC1_2
DUF3450
Motif
Other DBs
NCBI-GeneID:
128403620
NCBI-ProteinID:
XP_053224580
LinkDB
All DBs
Position
1:complement(15369278..15453365)
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AA seq
566 aa
AA seq
DB search
MDASKKADPPVSVELVQKANPDRSPVASIYVPEQGGYKEKFVNAVEDKYKCEKCHLILCN
PKQTECGHRYCETCMNALLSSAIPKCTACQETIVKDKIFKDNCCRRELLALQIFCRNENK
GCREQLTLGQLLTHLRNDCLFEELPCPRADCKEKILRRDLPDHVEKTCKYRETTCKYCKN
QVPMIMIQKHEDADCPCVMVTCPHKCSVSALLRKELNAHLSECINAPSTCSFKRYGCIFQ
GTNQQVKAHEATSAVQHVDLLKEWSNCLENKVAMLQNESLEKNKSIQTLHNQICSFEIEI
ERQKEMLRSNESKIHHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRVT
ELESVDKNAGQGNRNAGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGILIWKI
RDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEY
DALLPWPFKQKVTLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTV
LENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaagcaagaaagcagatcccccggtgtcagtggaactggtccaaaaggcaaat
cccgaccgcagcccagtggcatccatttatgtgcccgaacaaggtggctacaaagagaaa
tttgtgaatgcggtggaggacaaatacaaatgcgaaaagtgccacctcattttgtgcaat
ccaaagcagacagaatgtgggcatcggtattgcgagacctgtatgaatgctttgctaagc
tctgcaattccaaaatgtacagcatgtcaagaaacaatagtgaaagataagatatttaaa
gataattgctgtcggagggagcttcttgcccttcagatattctgcaggaatgaaaataaa
ggttgcagagaacaattgaccttgggacagttgcttacccacctgagaaatgactgtctg
tttgaagagcttccatgccctcgggctgattgcaaggagaaaatactgcgaagagacttg
ccagaccacgtagagaagacctgtaaatatcgggaaacaacgtgtaaatactgtaaaaac
caagtcccaatgattatgatacagaaacatgaagatgcagactgcccttgcgttatggtc
acgtgtcctcataaatgtagcgtttcagcgctcctgagaaaagagttgaatgcacatttg
tcagaatgtattaatgccccaagcacctgtagttttaagcgttatggctgcatttttcag
ggaacaaaccagcaagttaaagcacatgaagccacctcagcagtgcagcatgtagactta
ttgaaagagtggagtaattgtctagaaaataaggtggccatgctccaaaatgaaagtttg
gaaaagaacaagagtatacaaactttacataatcagatttgtagctttgaaatagaaatt
gagagacagaaggaaatgctgcggagtaatgagtccaaaatacatcacttacagcgagtg
atagacagccaagctgagaagctgaaagaattggacaaagagatccgtcccttccgacag
aactgggaggaagcggacagcatgaagagcagcgtcgagtctctccagaacagagtgact
gagctggaaagcgtcgataagaatgccgggcaaggaaataggaatgcaggtctgctagaa
tcccaactatctaggcatgatcagatgctgagcgtccacgacatccgattggctgatatg
gatctccgctttcaagttttggaaacggccagctacaatggaatattgatctggaaaatc
cgagattataaacgtcggaagcaagaggcagtgatggggaagacgttgtccttatacagt
caacctttttatacggggtacttcggctataagatgtgtgccagagtttatctcaacgga
gacggcatggggaaagggacgcacttgtccttgttctttgtcatcatgcggggagaatac
gacgcattgcttccgtggcccttcaagcaaaaagtcacccttatgttgatggatcaagga
ccttccaggcgccatttaggggatgctttcaaaccagaccccaacagcagtagtttcaag
aagcccaccggagaaatgaatattgcttctggctgcccagtctttgttgcacagactgtt
ctagaaaacggaacatatattaaagatgatactatttttattaaagtcatagtggataca
tcggacctaccagacccctga
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