Podarcis raffonei (Aeolian wall lizard): 128403733
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Entry
128403733 CDS
T09310
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf00310
Lysine degradation
praf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
128403733 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
praf03036
]
128403733 (SETDB1)
Enzymes [BR:
praf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
128403733 (SETDB1)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
128403733 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
128403733 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
SET
MBD
Pre-SET
Chromo_MORC2_6th
DUF4537
53-BP1_Tudor
Motif
Other DBs
NCBI-GeneID:
128403733
NCBI-ProteinID:
XP_053224750
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All DBs
Position
16:3544990..3582058
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AA seq
1257 aa
AA seq
DB search
MMAESPEMELQREVLEELGISLEDLKQLIDEELEKSERIAQRKKQLEGVAETVKQKEDEV
ARVDILLDNAVKAVGECEVLVKDIYANLGLEYLETDSEEEDAASKPMEVIEIPDEDDDDD
DVMSIDSADASNKMAKDQKLLREAMAAMRKSAQDVQKFMDAVNKKDGLDSYRGSQQVSPG
CELTHDGDLSVGDRVLGKKRTKTWHKGTLIAIQTVGPGKKYKVKFDNKGKSLLSGNHIAY
DYHPSADKLHVGSRVVAKYKDGNQMWLYAGIVAETPNVKNKMRFLIFFDDGYASYVVQPE
LYLICRPLKKSWEDIEDISCRDFIEEYVTAYPNRPMVLLKSGQLIKTEWEGTWWKSRVEE
VDGSLVKILFLVGSAKDDKRCEWIYRGSTRLEPMFSMKTSTASTLEKKQGGQMRTRPNVG
AVRSKGPVVQYTHDLTGTSSQFKPVEPPPPLPVVMSQPVSPQFIDVESLESQLAQAKKQQ
VAKKSTSFLRPGSVGSGPPSPTSPILSEMPPIGKTGVTQQFRFSGAQPSTSPTPQFYGMM
DRVPNDPNYRAPVEKLFYLPHVCNYTCLSRTRPFQTDQHRSRNPLLVPLLYDFRRMTARR
RINRKTGFHVIYKTPCGLCLRSMAEVERYLFETNCDFLFLEMFCLDPYVLVDRKFQPYKP
FYYIPDITMGKEDVPLSCVNEIDNTAPPQVAYSKERIPGKGVYINTGADFLVGCDCEDGC
RDKSKCACHQLTIQATACTPGGQTNPNAGFQYKRLEECLPTGVYECNKRCKCNRNMCTNR
LVQHGLQVRLQLFKTQNKGWGIRCLDDIARGSFVCIYAGKILTDDFADKEGLEMGDEYFA
NLDHIESVENSKEGYESEAKCSSDSSGVNLKDDEDENSGSEEQEESNEESSDDNFCKDED
FSTSSVWRSYATRRQTRGQRENGLSETASKDSGLARQASHEEAAHCKPPLSEETSKNKVA
SWLSSNTMADSFQDNDSRSSFRAHEAGEAKAAKAEPPDGEKAAPGGRDDFGLEVKKKEGP
EDHSKPLLVPGAGRLYGYNPNPPVPEGVRRPISKTALLQSRRHTESHQDVLMLSSSTDSD
GDNGRSTSRQAQGNDSDDIQTISSGSEEEPGPDGKKSSSGLGPVKRQVAVKSTRGFALKS
THGIAIKSTNLASGENMPIRRNTRQFYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQN
VFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagagtccccagagatggagctgcagcgagaggtgttggaggagctcgggatc
tccctggaggatctcaagcagctgattgatgaggagctggagaagtcggagcggattgcg
cagcggaagaagcagctggagggagtggcggagactgtgaagcagaaggaggatgaagtg
gcccgtgtggacattctcctggacaatgctgtgaaagctgtgggtgaatgtgaagttcta
gtcaaggacatatatgcgaatctgggcctggagtacctggagactgactcggaggaagag
gatgctgcctccaagcccatggaagtgatcgagatccctgatgaggacgacgacgacgac
gacgtcatgagcatcgattcagcagatgcaagtaacaaaatggcgaaggatcagaagttg
cttcgggaagccatggctgccatgaggaagtctgcgcaggatgttcagaaattcatggac
gccgtgaacaaaaaggatggcctggactcctaccggggatcccagcaggtgagtcctggc
tgcgagctcacccatgatggagacctgtccgtcggagaccgcgtcctggggaagaagagg
acaaagacctggcacaagggcaccctgatcgccatccagactgtgggccctgggaagaaa
tacaaggtgaagttcgacaacaaagggaagagccttctctcggggaaccacatcgcctat
gactaccatccttcggccgacaagctccatgttgggagccgggtggtggccaagtacaag
gacggcaaccagatgtggctctacgccgggatcgtggctgagacgcccaacgtcaagaac
aagatgaggttcctcatcttcttcgatgatggttacgcctcctatgtcgtccagccagag
ctctacctgatctgcaggcctctcaagaagtcgtgggaggacatagaagacatctcgtgc
cgggatttcatcgaggagtacgtcacggcgtacccgaaccggccgatggtcttgctcaag
agcggccagctgatcaaaaccgagtgggaggggacctggtggaagtcccgcgtggaggaa
gtggacgggagcctggtcaaaatcctcttcctggtaggatctgctaaggacgacaagcgc
tgtgaatggatttaccggggatccacccgcctggagccgatgttcagcatgaagacctcc
accgcttccaccctggagaaaaagcaaggagggcaaatgaggactcgcccgaacgttggg
gccgtccggagcaaagggccggtcgtccagtacacgcacgacttaacggggaccagctca
cagttcaagcccgtggagcctcctccaccattgcctgtcgtgatgtcccagccggtttcg
ccccagttcattgacgtggaaagcctcgagagccagctcgctcaggccaagaagcagcag
gtggcgaagaagagcacttcgttcttgcgtcccggttcagtgggatcggggccgccctcc
ccgacctcccccatcctgagcgaaatgcctcccataggcaagacgggcgtgacccagcag
ttccggttctcgggcgcccagccctccaccagccccaccccgcagttctacggcatgatg
gaccgggtgcccaacgaccccaactaccgggctcccgtggagaagctcttctacctgccc
cacgtctgcaactacacctgcctctcccggacgcgccccttccagacggaccagcaccgc
agccggaaccccctccttgtcccgctgctgtacgacttccgccgcatgacggcccgccgg
cggatcaaccgcaagacgggcttccacgtcatctacaagacgccgtgcgggctgtgcctg
cgcagcatggcggaggtggagcgctacctctttgagacgaactgcgacttcctcttcctg
gagatgttctgcctggacccctacgtcctggtggaccgcaagttccagccctacaagccc
ttctactacatccccgacatcaccatgggcaaggaggacgtccccctctcctgcgtcaac
gagatcgacaacaccgccccgccccaggtggcctacagcaaggagcgcatccccgggaag
ggggtctacatcaacaccggcgccgatttcctggtgggctgcgactgcgaggatgggtgc
cgggataagtccaaatgcgcttgtcaccagctcacgatccaagcgaccgcctgcaccccg
gggggccagaccaacccaaatgccggattccagtacaagagactggaagaatgcctcccc
acaggcgtctacgagtgcaacaagcgctgcaagtgcaatcggaacatgtgcacgaaccgc
ctggtgcaacacggcctgcaagtccggctgcagctcttcaagacgcagaacaagggctgg
ggcatccgctgcctggacgacatcgccaggggctccttcgtctgcatctacgcaggtaaa
atcctgacggacgactttgctgacaaggagggcctggagatgggcgacgaatactttgcc
aacctggaccacattgagagcgtggagaactcgaaggagggctacgaaagcgaggccaag
tgctcttcggacagcagcggcgtcaacctgaaggacgacgaggacgagaactcgggctcg
gaggagcaggaggagtccaacgaggagagctcggacgacaacttctgcaaggacgaggac
ttcagcaccagctcggtctggcgcagctacgccacccggcgccagacgcggggccagcgg
gagaacggcctctccgagacggcttccaaggactcgggcctggcccggcaggccagccac
gaagaggctgcccactgcaagccccccctctcagaggagacctcgaaaaacaaggtggcc
tcctggcttagctccaacaccatggccgacagcttccaggacaacgacagccgctcctcg
ttccgcgcgcacgaggcaggcgaggcaaaggccgcaaaggccgagcccccggacggcgag
aaggcggcgccgggaggccgggacgatttcgggctggaggtgaagaagaaagagggaccc
gaagaccacagcaaacctctgttggtgcctggtgcaggcaggttgtacggttacaatcca
aacccgccggtccccgaaggagtccggaggccgatcagcaagacggctttgcttcagagc
cggaggcacacagagtcccatcaggatgtgctgatgctctccagcagcacggacagcgat
ggcgacaacgggcgcagcacctccaggcaggcacagggcaacgacagcgacgacatccag
accatctcctccgggtcggaagaggagccggggccagacggcaagaagagctcttcgggg
ctgggaccagtgaaaaggcaggtggccgtcaagtccacccgcggcttcgccctgaagtca
acccacgggattgccatcaagtcgaccaacctggcgtctggggagaacatgcccatccgg
aggaacacgcggcagttctatgacggggaggagtcctgttacatcatcgacgccaaactc
gaaggcaacttgggccgctacctcaatcatagctgcagtcctaacctctttgtccagaac
gtctttgtggacacccacgacctccgtttcccctgggtggccttcttcgccagcaagaga
atcagagccggcaccgaacttacctgggactataactacgaagttggcagcgtggagggc
aaggaacttctgtgctgttgcggtgcaattgaatgccgtggacgtttgttgtaa
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integrated database retrieval system
