KEGG   Podarcis raffonei (Aeolian wall lizard): 128404740
Entry
128404740         CDS       T09310                                 
Symbol
LDLR
Name
(RefSeq) low-density lipoprotein receptor
  KO
K12473  low-density lipoprotein receptor
Organism
praf  Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03272  Virion - Hepatitis viruses
praf04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:praf00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    128404740 (LDLR)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    128404740 (LDLR)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:praf04131]
    128404740 (LDLR)
Membrane trafficking [BR:praf04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Low-density lipoprotein receptor (LDLR) family proteins
    128404740 (LDLR)
SSDB
Motif
Pfam: Ldl_recept_a Ldl_recept_b FXa_inhibition cEGF SGL EGF_CA EGF Vgb_lyase EGF_3 hEGF Psg1
Other DBs
NCBI-GeneID: 128404740
NCBI-ProteinID: XP_053226579
LinkDB
Position
17:31684301..31714978
AA seq 873 aa
MSPGGLQTPLLALAVVLCAQVSGNGVEKCRRREFQCGNGECIPYKWICDGKAECQDGSDE
SLDACKSVTCEPGQFSCGGRINRCIDMSWRCDSQIDCENGSDEENCPPKHCADSEFQCKD
GNCIALSFVCDEDRDCEDGSDEEGCSGPTCSPEMFHCNSSECIPKLWACDKDADCKDGSD
ESPEHCGKLEKDNPCSPLEFHCGSGECIHQKWQCDGGFDCADNSDEADCAKVTCRPDEFQ
CNDGTCIHGSLQCNKEIDCKDRSDEVGCVNVTTCEGPNIFKCHSGECITMDKVCNAKKDC
RDWSDEPLKECRTNECLDNKGGCSHICNDLKIGYECLCPEGFQLINQRKCEDIDECLNPD
TCSQICVNLKGSYKCECNEGYQIDPTTKACKAIGTIAYLFFTNRHEVRKMTLDRSEYSSL
IPRLKNAVALDMEIANNKLYWSDSSQKKIYSTPIDKADNHSHHATVIDSGIKYPDGLAVD
WVHSNIYWADSALGTISVASSEGLRRRTLIKEVDAKPCAIVVDPVHGFMYWADWGTSAKI
AKSGLNGVDSFPLVKEGILWPNGITLDLANQRLYWVDSKLHSISSIDVNGRNRKTILVNE
DKLAHPFAITVFEDKVFWTDVMNEAIFSANRLTGSDIVKVAGDLYSPQDLTLFHSVRQPK
GVNWCEKNGTPNGGCQYLCLPAPQITAHSAKYTCACPDGMHLAADMRSCSRDTVPEASAS
VAATTTRQPPSRTTPLGRLLATTGAPRHETERLPAAAPTVLSKLIPGISERTTPPMVTLS
QQARNGIAAETDGARQGGPPALSIVLPLVLICLISFGGFLVWKNWRLRNINSINFDNPVY
QKTTEDEVHICRRQEGYTYPSRQMVSLEDDTTA
NT seq 2622 nt   +upstreamnt  +downstreamnt
atgagtcccggtggattgcaaacgcctttgctagccttggcggtcgtgctctgcgcccaa
gtttctggaaacggtgtggagaagtgtaggaggagggagttccagtgcgggaatggtgaa
tgcatcccttacaaatggatatgtgatggcaaggctgaatgccaggacggctctgatgaa
tccttggatgcctgcaagtccgtgacctgtgagccagggcagttcagctgtggcggccgc
atcaatcggtgcattgatatgtcctggcggtgtgactcgcagattgattgtgagaatggc
tccgatgaagaaaactgcccccctaaacattgtgctgacagcgagttccagtgcaaagat
gggaactgcattgctttgagttttgtctgtgacgaagaccgcgactgcgaggacggcagc
gacgaagaaggctgctctggcccgacctgcagccccgaaatgtttcactgcaacagctca
gagtgcattcccaagctctgggcctgtgacaaagatgcggactgcaaggatgggtcggat
gagtcgcccgagcattgtgggaagctggagaaggacaatccttgctctccgctggagttc
cactgcggaagcggtgaatgcatccatcagaaatggcagtgcgatgggggttttgattgt
gcagacaactcagacgaagcagactgtgctaaagtcacatgccgcccagatgaatttcag
tgcaatgatggtacttgcatccatgggagcctgcagtgtaacaaggagattgactgcaaa
gacaggagtgatgaggttggctgtgtcaacgtgacaacctgtgaaggaccaaacatattc
aagtgccattctggagaatgcatcactatggacaaggtctgcaatgcgaagaaagactgc
agggattggtcggatgagcccctcaaggagtgccgaacaaatgaatgtttggataataag
ggtggttgctcccacatatgcaacgatctcaaaattgggtacgagtgtttatgccctgaa
ggattccagctgattaaccaaagaaaatgtgaagatatcgatgagtgtctcaaccctgat
acctgtagccaaatctgtgtgaacttgaaaggaagctataagtgtgaatgtaatgaaggc
tatcagattgaccctaccacgaaggcctgcaaagccattggcaccattgcatatctcttc
ttcaccaatcggcatgaggtcaggaagatgactctcgaccgcagcgagtacagcagcctc
atcccccgtctcaaaaacgcggtggctttagatatggaaatagccaacaacaaactctac
tggtctgacagctctcagaaaaaaatatacagcactccaatagacaaagcagacaaccac
tctcaccatgccaccgtgattgacagcgggatcaaatacccagatggtctcgctgtggac
tgggtgcacagcaacatctactgggctgactctgccctgggcacaatctccgtggccagc
agtgaaggcttgaggaggaggaccctgatcaaggaagttgacgccaagccgtgtgccatc
gtggtggatcccgtccacgggtttatgtactgggctgactggggcacgtctgcgaaaatt
gccaaaagtggtctgaatggggtggacagttttcccctggtgaaagaaggcattctttgg
cctaacggaataactctagatctggccaaccagcgcctctactgggtagactcaaagctc
cactccatctccagcatagatgtgaatgggagaaacagaaagaccatccttgtgaatgag
gacaagctggctcatccttttgccatcacagtctttgaggataaagtgttctggacagat
gtcatgaatgaagccattttcagtgccaaccgcctgaccggctccgatatcgtcaaggtg
gcaggggacctgtattcaccccaggatctgacgttgtttcattctgtacggcagcccaaa
ggtgtcaactggtgtgagaagaacggaactcccaatggaggctgccaatacctctgtctc
cctgccccgcaaatcactgctcactccgccaagtacacctgtgcctgtcctgatggcatg
cacctggccgcagacatgagaagttgcagcagagacactgttcccgaggcttctgcttcc
gttgctgccacaacaactcggcagcctccctcgagaaccacacctttgggccggttgctc
gccacaaccggtgcccccaggcatgaaactgaacgcctgcctgccgctgcccccaccgtt
ctgagcaaactcatcccaggcatctctgagcgtaccacgcctccgatggtcaccctgtcg
cagcaagcgcgaaacggaattgctgctgaaacggacggggcaaggcaagggggtccccca
gcgctctcaattgtcctaccactggtgctgatttgtttaatctcctttgggggtttcctt
gtttggaagaactggcgcctgaggaacatcaacagcatcaattttgacaaccctgtctat
cagaaaacgacggaggacgaggttcacatctgtcggagacaggaggggtacacctaccca
tcgagacaaatggtcagcctggaagacgacaccacagcgtga

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