Podarcis raffonei (Aeolian wall lizard): 128404740
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Entry
128404740 CDS
T09310
Symbol
LDLR
Name
(RefSeq) low-density lipoprotein receptor
KO
K12473
low-density lipoprotein receptor
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03272
Virion - Hepatitis viruses
praf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
128404740 (LDLR)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128404740 (LDLR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
praf04131
]
128404740 (LDLR)
Membrane trafficking [BR:
praf04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
128404740 (LDLR)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
SGL
EGF_CA
EGF
Vgb_lyase
EGF_3
hEGF
Psg1
Motif
Other DBs
NCBI-GeneID:
128404740
NCBI-ProteinID:
XP_053226579
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Position
17:31684301..31714978
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AA seq
873 aa
AA seq
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MSPGGLQTPLLALAVVLCAQVSGNGVEKCRRREFQCGNGECIPYKWICDGKAECQDGSDE
SLDACKSVTCEPGQFSCGGRINRCIDMSWRCDSQIDCENGSDEENCPPKHCADSEFQCKD
GNCIALSFVCDEDRDCEDGSDEEGCSGPTCSPEMFHCNSSECIPKLWACDKDADCKDGSD
ESPEHCGKLEKDNPCSPLEFHCGSGECIHQKWQCDGGFDCADNSDEADCAKVTCRPDEFQ
CNDGTCIHGSLQCNKEIDCKDRSDEVGCVNVTTCEGPNIFKCHSGECITMDKVCNAKKDC
RDWSDEPLKECRTNECLDNKGGCSHICNDLKIGYECLCPEGFQLINQRKCEDIDECLNPD
TCSQICVNLKGSYKCECNEGYQIDPTTKACKAIGTIAYLFFTNRHEVRKMTLDRSEYSSL
IPRLKNAVALDMEIANNKLYWSDSSQKKIYSTPIDKADNHSHHATVIDSGIKYPDGLAVD
WVHSNIYWADSALGTISVASSEGLRRRTLIKEVDAKPCAIVVDPVHGFMYWADWGTSAKI
AKSGLNGVDSFPLVKEGILWPNGITLDLANQRLYWVDSKLHSISSIDVNGRNRKTILVNE
DKLAHPFAITVFEDKVFWTDVMNEAIFSANRLTGSDIVKVAGDLYSPQDLTLFHSVRQPK
GVNWCEKNGTPNGGCQYLCLPAPQITAHSAKYTCACPDGMHLAADMRSCSRDTVPEASAS
VAATTTRQPPSRTTPLGRLLATTGAPRHETERLPAAAPTVLSKLIPGISERTTPPMVTLS
QQARNGIAAETDGARQGGPPALSIVLPLVLICLISFGGFLVWKNWRLRNINSINFDNPVY
QKTTEDEVHICRRQEGYTYPSRQMVSLEDDTTA
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgagtcccggtggattgcaaacgcctttgctagccttggcggtcgtgctctgcgcccaa
gtttctggaaacggtgtggagaagtgtaggaggagggagttccagtgcgggaatggtgaa
tgcatcccttacaaatggatatgtgatggcaaggctgaatgccaggacggctctgatgaa
tccttggatgcctgcaagtccgtgacctgtgagccagggcagttcagctgtggcggccgc
atcaatcggtgcattgatatgtcctggcggtgtgactcgcagattgattgtgagaatggc
tccgatgaagaaaactgcccccctaaacattgtgctgacagcgagttccagtgcaaagat
gggaactgcattgctttgagttttgtctgtgacgaagaccgcgactgcgaggacggcagc
gacgaagaaggctgctctggcccgacctgcagccccgaaatgtttcactgcaacagctca
gagtgcattcccaagctctgggcctgtgacaaagatgcggactgcaaggatgggtcggat
gagtcgcccgagcattgtgggaagctggagaaggacaatccttgctctccgctggagttc
cactgcggaagcggtgaatgcatccatcagaaatggcagtgcgatgggggttttgattgt
gcagacaactcagacgaagcagactgtgctaaagtcacatgccgcccagatgaatttcag
tgcaatgatggtacttgcatccatgggagcctgcagtgtaacaaggagattgactgcaaa
gacaggagtgatgaggttggctgtgtcaacgtgacaacctgtgaaggaccaaacatattc
aagtgccattctggagaatgcatcactatggacaaggtctgcaatgcgaagaaagactgc
agggattggtcggatgagcccctcaaggagtgccgaacaaatgaatgtttggataataag
ggtggttgctcccacatatgcaacgatctcaaaattgggtacgagtgtttatgccctgaa
ggattccagctgattaaccaaagaaaatgtgaagatatcgatgagtgtctcaaccctgat
acctgtagccaaatctgtgtgaacttgaaaggaagctataagtgtgaatgtaatgaaggc
tatcagattgaccctaccacgaaggcctgcaaagccattggcaccattgcatatctcttc
ttcaccaatcggcatgaggtcaggaagatgactctcgaccgcagcgagtacagcagcctc
atcccccgtctcaaaaacgcggtggctttagatatggaaatagccaacaacaaactctac
tggtctgacagctctcagaaaaaaatatacagcactccaatagacaaagcagacaaccac
tctcaccatgccaccgtgattgacagcgggatcaaatacccagatggtctcgctgtggac
tgggtgcacagcaacatctactgggctgactctgccctgggcacaatctccgtggccagc
agtgaaggcttgaggaggaggaccctgatcaaggaagttgacgccaagccgtgtgccatc
gtggtggatcccgtccacgggtttatgtactgggctgactggggcacgtctgcgaaaatt
gccaaaagtggtctgaatggggtggacagttttcccctggtgaaagaaggcattctttgg
cctaacggaataactctagatctggccaaccagcgcctctactgggtagactcaaagctc
cactccatctccagcatagatgtgaatgggagaaacagaaagaccatccttgtgaatgag
gacaagctggctcatccttttgccatcacagtctttgaggataaagtgttctggacagat
gtcatgaatgaagccattttcagtgccaaccgcctgaccggctccgatatcgtcaaggtg
gcaggggacctgtattcaccccaggatctgacgttgtttcattctgtacggcagcccaaa
ggtgtcaactggtgtgagaagaacggaactcccaatggaggctgccaatacctctgtctc
cctgccccgcaaatcactgctcactccgccaagtacacctgtgcctgtcctgatggcatg
cacctggccgcagacatgagaagttgcagcagagacactgttcccgaggcttctgcttcc
gttgctgccacaacaactcggcagcctccctcgagaaccacacctttgggccggttgctc
gccacaaccggtgcccccaggcatgaaactgaacgcctgcctgccgctgcccccaccgtt
ctgagcaaactcatcccaggcatctctgagcgtaccacgcctccgatggtcaccctgtcg
cagcaagcgcgaaacggaattgctgctgaaacggacggggcaaggcaagggggtccccca
gcgctctcaattgtcctaccactggtgctgatttgtttaatctcctttgggggtttcctt
gtttggaagaactggcgcctgaggaacatcaacagcatcaattttgacaaccctgtctat
cagaaaacgacggaggacgaggttcacatctgtcggagacaggaggggtacacctaccca
tcgagacaaatggtcagcctggaagacgacaccacagcgtga
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