Podarcis raffonei (Aeolian wall lizard): 128406597
Help
Entry
128406597 CDS
T09310
Symbol
TRPC5
Name
(RefSeq) short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
praf01009
]
128406597 (TRPC5)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
praf04040
]
128406597 (TRPC5)
Protein phosphatases and associated proteins [BR:
praf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128406597 (TRPC5)
Ion channels [BR:
praf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128406597 (TRPC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
LHD_TRPY1
YVC1_C
Motif
Other DBs
NCBI-GeneID:
128406597
NCBI-ProteinID:
XP_053230109
LinkDB
All DBs
Position
Z:24906807..25085202
Genome browser
AA seq
988 aa
AA seq
DB search
MAQLYYKKVNYSPYRDRIPLQIVRAEAELSLEEKAYLSAVEKGDYASVKHALEEAEIYYN
ININCMDPLGRSALLIAIENENLEIMEMLLSHSVYVGDALLYAIRKEVVGAVELLLNYRK
PSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQRRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAE
YEELSQQCKRFAKDLLDQARSSRELEIILNHRDDQSEELDPQKCHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCITIGLLFPVLSVAYLIAPKSRLGLFI
KKPFIKFICHTGSYLTFLFMLLLASQHIVRTDLHMQGPPPTIVEWMILPWVLGFIWGEIK
EMWDGGFNEYVHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPRQEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETSASEEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPP
FNIIPSPKSFWYLCKWIHNQLCPSQDPENDQKKHENLKTFTERHADNLIQNQHYQEVIRN
LVKRYIAAMIRNSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKPQRRSYSTSSTEVS
QKDDANEDTAGETSKAKSVPFGTANKKKDFNVSALIKTMSGFEMVSEKPKSNGINKRSFI
RNGNRVQRLSSSKKESFKRLGLLFSKMNGHLPEPNSEPMYTISDGVIQPHLMWQDIKYSQ
MAKERDENCSKSEINLNEVDYSRNVRHTGQSQCPAVCSSSLHCASSICTSNSKLIDSSED
VFDSWGDACDLFRNQWKDGQEEQVTTRL
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggctcagctgtactacaaaaaggtgaactactcgccctacagagaccggatccccttg
cagattgtgcgggcagaagcagaactgtcattggaggagaaggcctacctcagtgctgtg
gaaaagggggactatgccagtgtgaagcatgccttggaggaggctgaaatctactacaac
atcaacattaactgcatggaccctcttggacgcagtgcccttttaatagccatagagaat
gaaaacctggagattatggagatgctactgagccacagtgtctacgtgggtgatgctctc
ttgtatgcaataaggaaagaagtggtgggggctgtggagcttcttctgaactatagaaag
ccaagtggggagaaacaggtccccacattaatgatggacactcagttttcggagttcacc
cctgatataacccccataatgctggcggctcacaccaacaactatgaaatcatcaagctg
ctagtccaaagacgggtcacgatcccgcgcccgcaccagatcagatgcaattgtgtggaa
tgcgtctccagttctgaagtagacagcctgaggcattccaggtcaaggctgaatatttac
aaagctttggccagcccttcgttgattgccttatctagtgaggacccgatcctgacggcc
ttccggctgggttgggagctgaaggagctcagcaaagtggagaatgagttcaaggccgag
tatgaggagctttcacagcagtgcaagaggtttgctaaagaccttctggaccaggcacgg
agctccagggagctggaaatcatcttgaaccacagggatgaccaaagcgaagaattagac
ccgcagaaatgtcatgacttggcaaagctaaaggtagcaataaagtaccatcagaaagag
tttgttgcccagcccaactgccagcagctgctagcgacgctttggtatgatggctttccc
ggatggcggcgaaagcattgggtggtcaagctcttgacatgcatcaccattggactgctg
tttcccgtgctttctgtggcctacctgattgcccctaagagcaggctgggactgttcatc
aaaaagccatttataaagtttatctgccacactggctcctaccttacctttctcttcatg
ctcctactggcatcgcagcacattgtcaggactgacctccacatgcagggacctcctcca
accatcgttgaatggatgatcctcccatgggttctaggttttatctggggcgaaatcaaa
gagatgtgggacggaggcttcaatgagtatgttcacgactggtggaacctgatggatttt
gcaatgaactctctctacctggcaacgatctctctgaaaattgttgcatatgtcaagtac
aatggttcccgtccaaggcaggagtgggaaatgtggcaccccaccctcattgcagaagcc
ctctttgcaatatcaaacattttaagctccttgcgtctcatctccctgtttacagcaaac
tctcacctgggacccctgcagatctctctgggacgtatgctgctagatattctcaagttc
ctatttatttactgcctggtgctgctggctttcgccaatggactgaaccagctttatttc
tattacgagaccagtgcctcggaagaacccaacaattgcaaggggatccgatgcgagaag
cagaacaatgccttctccacgctctttgaaactctacagtcactcttttggtctgtgttt
ggtctgctgaacctctacgtcactaatgtgaaagccaggcatgaattcacagaatttgtt
ggggccaccatgtttggcacgtacaacgtcatctccctagtggtcttgctaaatatgctc
atagcaatgatgaataactcctaccagctcatagcagaccacgcagatattgaatggaag
tttgcacgcaccaagctctggatgagttactttgatgaaggtggcactctgccacctcct
tttaacatcatccccagccccaagtccttctggtatctttgcaagtggatccacaaccaa
ctctgcccgtctcaggacccagagaatgatcagaaaaagcatgaaaacctgaagacattc
acagaacgtcatgctgacaacttgattcagaatcagcactatcaggaagtgatcaggaac
ttggtgaagagatatattgcagcaatgataagaaattcaaaaaccaatgaaggattaacc
gaagaaaactttaaggaattaaagcaggatatctctagtttccggtatgaagtccttgac
ctcttaggcaaccgaaaaccccagcggagaagctattccaccagcagcacagaagtctcc
cagaaggatgacgctaatgaggacactgctggagaaacatccaaagcgaagagcgttcct
tttggcacagccaacaagaagaaagatttcaacgtgtcggctctgattaagactatgtct
gggttcgaaatggtcagcgagaagcccaaaagcaatgggatcaacaagcgctccttcatc
cgcaatggaaacagggtccaaaggctctctagctccaagaaagagtccttcaagcgactg
ggcctccttttttccaagatgaatggccacctcccagagccaaactcagagcccatgtac
accatctccgatggggtcatccagccacacctcatgtggcaagacattaagtattctcag
atggctaaagagcgagacgagaactgctccaagagtgaaattaacctcaatgaggtggac
tacagtaggaacgtcagacatacgggacagagccagtgccctgcggtttgttccagttcc
cttcactgtgcttccagcatctgcacctctaattccaaactcatagactcctctgaggac
gtttttgactcgtggggagacgcctgtgatttgtttaggaaccaatggaaagatggacag
gaggaacaggttaccactcgcctataa
DBGET
integrated database retrieval system
