Podarcis raffonei (Aeolian wall lizard): 128406935
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Entry
128406935 CDS
T09310
Name
(RefSeq) TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04010
MAPK signaling pathway
praf04137
Mitophagy - animal
praf04141
Protein processing in endoplasmic reticulum
praf04210
Apoptosis
praf04217
Necroptosis
praf04621
NOD-like receptor signaling pathway
praf04622
RIG-I-like receptor signaling pathway
praf04920
Adipocytokine signaling pathway
praf05132
Salmonella infection
praf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128406935
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128406935
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
128406935
09143 Cell growth and death
04210 Apoptosis
128406935
04217 Necroptosis
128406935
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128406935
04622 RIG-I-like receptor signaling pathway
128406935
09152 Endocrine system
04920 Adipocytokine signaling pathway
128406935
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128406935
09171 Infectious disease: bacterial
05132 Salmonella infection
128406935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
praf03019
]
128406935
04121 Ubiquitin system [BR:
praf04121
]
128406935
Enzymes [BR:
praf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128406935
Messenger RNA biogenesis [BR:
praf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
128406935
Ubiquitin system [BR:
praf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
128406935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF_BIRC3_bd
zf-C3HC4
TRAF2_zf
TRAF3_RING
zf-RING_6
zf-RING_5
zf-C3HC4_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_5
Motif
Other DBs
NCBI-GeneID:
128406935
NCBI-ProteinID:
XP_053230806
LinkDB
All DBs
Position
Z:complement(586632..610719)
Genome browser
AA seq
626 aa
AA seq
DB search
MAASGSCTPPGSLDPSLPGFPKAILRAEVQGKYLCSECEDLLRRPFQAQCGHRYCAYCLK
KLVGSGPLPCAACLREGLYEEGVSVLDSGTAFPDNAARREVESLPAACVRKDCPWKGTVK
EYEAHEETCPKFPLTCDGCGKTDVPRESFADHVRSCGRFRVPCRFRPVGCGEVLEKEALP
LHEAQNFPEHLGLLLNFALRLAGAPNSDPHFFGAPNSEKDPTLFGAPDLVQDPQLVPEPH
FFGAPHSAKDPRLLQDPHLLGAPDLVQDPHLLGAPNPVKEPHQIGAPNLAPDPHLVGAPN
SAKDPHLVKEPHLLGAPHSAKDPHLVGAPNSAKDPHLVKEPHLLGAPHSAPDPHPIRGPD
SAPDPHFLGAPHSAPDPHPIRAPNPPPDPHFLGPPGPQPWAALELKTATLEKIVCVLNRE
VERLAAESAQERRREEERAEALTHKIRTLERTVALKEAALAEVESALRRAENATYDGVLI
WKVEEVGRKRQEAVAGRAPAVFSPAFYTGRYGYKMCLRLYLNGDGSGRNTHLSLFFVLMK
GPNDALLKWPFNQKVTLMLLDQDHREHVIDAFRPDVTSSSFQRPIGELNVASGCPLFCPL
SKMAARDSYVRDDTLFIKAIVDLTGL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccggatcctgcaccccgcccggatccctcgatccctctctccccggcttc
ccgaaggccatcctgcgggccgaggtgcaagggaagtacctgtgctccgagtgcgaggat
ctgctgcggcggcccttccaggcccagtgcggccaccgctactgcgcttactgcctgaag
aagctggtgggctcggggccgctgccctgcgccgcctgcctccgggaagggctgtacgaa
gagggcgtctccgtcctggacagcggcacggctttccccgacaacgccgcccggcgcgag
gtggaaagtctcccggccgcctgcgtccgcaaggactgtccctggaaaggtaccgtcaag
gagtatgaggctcacgaggagacctgccccaagttccccctcacctgcgacggctgcggg
aagacggacgtcccgcgggaatcgttcgccgaccacgtccggagctgcggaaggttccgg
gtgccgtgccgcttccggcccgtcggctgcggcgaggtgctggagaaggaagccctgccc
ctccacgaggcccagaactttccggaacatctcggcctactcctgaactttgccctccgg
ctggctggggcccccaactcagacccccatttctttggggcccccaattcggaaaaagac
cccactttattcggggcccccgatctggtccaagacccccaactggtcccagagccccat
ttcttcggggccccacattcggccaaagacccccgtttgctccaagacccccatttattg
ggggcccccgatttggtccaagacccccatttattgggggccccgaatccggtcaaggaa
ccccatcagattggggcccccaatttagccccagacccccatctggtcggggcccccaat
tcggctaaagacccccatttggtgaaggagccccatttattgggggccccacattcagcc
aaagacccccatctggtcggggcccccaattcggctaaagacccccatttggtgaaagag
ccccatttattgggggccccacattcggccccagacccccatccaatcaggggccccgat
tcagccccagacccccattttctcggggccccacattcggccccagacccccatccaatc
agggcccccaatccgcccccagacccccatttcctcgggcccccgggcccccagccctgg
gcggccctcgaactcaagaccgccaccctagagaagatcgtctgcgtcctgaaccgggaa
gtggagcggctggcggccgaatcggcgcaggagcggcgccgggaggaggagcgcgccgaa
gcgctgacccacaagatccggaccctggagagaactgtagcgctgaaggaggcggcgctg
gcggaagtggagtcggcgcttcggcgcgcggaaaacgcgacgtacgacggcgtcttgatc
tggaaggtggaggaagtggggcggaagaggcaggaagcggtggccggaagggcgccggcc
gtcttctcgccggccttctacaccggccgctacggctacaagatgtgcctccgcctctac
ctcaacggcgacggatccgggcgcaacacccacctctccctcttcttcgtcctcatgaag
gggcccaacgacgccctcctgaagtggcccttcaaccagaaggtcaccctgatgctgctg
gaccaggaccaccgggagcacgtgatcgacgccttccgtccggacgtgacctcctcctct
ttccagcgcccaatcggcgagttgaacgtggccagcggctgccccctcttctgccccctt
tccaagatggccgcccgggactcctacgtccgcgacgacaccctcttcatcaaggccatc
gtcgacctcaccggactctga
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