Podarcis raffonei (Aeolian wall lizard): 128408239
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Entry
128408239 CDS
T09310
Symbol
IARS1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
128408239 (IARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
praf01007
]
128408239 (IARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
praf03016
]
128408239 (IARS1)
Enzymes [BR:
praf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
128408239 (IARS1)
Amino acid related enzymes [BR:
praf01007
]
Aminoacyl-tRNA synthetase
Class I (U)
128408239 (IARS1)
Transfer RNA biogenesis [BR:
praf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
128408239 (IARS1)
Prokaryotic type
Other AARSs
128408239 (IARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
128408239
NCBI-ProteinID:
XP_053233617
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All DBs
Position
2:77381244..77476056
Genome browser
AA seq
1264 aa
AA seq
DB search
MVQQVAENINFPQEEEKILQLWSKLNCFQECLKQSKNRPRFTFYDGPPFATGLPHYGHIL
AGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIAEYNKSC
RGIVMRYSQEWKISVTRLGRWIDFDNDYKTLYPEFMETVWWVFKQLYDKGLVYRGVKVMP
FSTACNTPLSNFESHQNYKDVQDPSVIVTFPLEEDEGISLVAWTTTPWTLPSNLALCVNP
DLQYVKVEDKNTGKIFILMEARLASLYKSETEYAILDRFPGVTLKGKKYKPLFKYFIKCK
ENGAFTVVTDNYVKEEEGTGVVHQAPYFGADDYRVCMDFNIIRKDSVPVCPVDASGCFTA
EVTDFAGQYVKDADKNIIRFLKEQGRLVHTSSYKHSYPFCWRSDTPLIYKAVPSWFVRVE
HMVEKLLENNAQCYWVPDFVREKRFGNWLREARDWAISRNRYWGTPIPLWVSDDFEEVVC
IGSVAELEELSEVKVTDLHRESVDYITIPSRCGKGVLHRVSEVFDCWFESGSMPYAQVHY
PFENKREFEDAFPADFIAEGIDQTRGWFYTLLVLSTALFGKPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPANIVNSYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVFLPWYNAY
RFLIQNVVILQLKEDGKEFLYNENTVKESNNIMDKWILSFAQSLIQFFKAEMAAYRLYTV
VPRLVKFVDILTNWYVRMNRRRLKGENGTDDCIMALETLFSVLHSMCRLMAPYTPFITEL
MYQNLKTLIDPACIQEKNTDSIHYLMVPQVREDLIDKNIESAVSRMQSVVELGRVIRDRK
TIPVKYPLKEVVVIHQDPQALEDIKSLEKYILEELNVRQVTLSTEKDKYGIRLRAEPDHM
VLGKRLKGAFKSVMAAVKELKSEQLEEFQKTGTIVVEGHELHEEDLRLMYTFNQAEGGSA
QFEAHSDSQVLVLLDVTPDQSMVDEGVAREVINRIQKLRKKRNLVPTDEITVYYRAHPEG
DYLDTVIKEHTDFIFATIKAALKPYPVPTSTEVLIQEKTQLKGSELEITLAKGALNHRIE
PACAYVNLNISVNGKEQAGTVLLENPKGDNTLDFAKLVNTISCIFGLENSKLAVFNGKTE
LKNQTDLLSLSGKMLHVTAGSVPALNSLDGFLCQYINLQLVNAKPQECLNGLVGTLLMEN
PVGQNGLTYQGLLHETGKVFGLRSRRLKLFLDEALTEEITRNTSMKTLNTKTVYVHAAPT
TAEC
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atggttcagcaagttgcagaaaacataaactttccacaggaggaagagaaaatattgcag
ctttggagcaaacttaattgctttcaagaatgcctaaaacagtcaaaaaatagaccgagg
tttacattttatgatgggcctccatttgccacaggacttcctcattatggacacatactt
gcaggaaccatcaaagacatagtaactagatttgctcatcagagtggatttcatgtggac
agaagatttggttgggattgccatggtttgccagtggagtatgaaattgataaaacactg
ggcatcaaaggaccagaagatgttgcaaaaatgggaattgcagaatacaacaagagttgc
agaggaattgtgatgaggtactcccaagaatggaaaatcagtgttacaagacttggacgg
tggattgactttgacaatgactataaaactttgtatccagagttcatggagactgtatgg
tgggttttcaagcagctttatgacaaaggactggtataccgaggagttaaagtcatgcct
ttttcaacagcatgtaacacacccctttctaacttcgagtctcaccagaattataaggat
gtccaagacccttcagtcattgttacctttccattggaagaagatgaaggcatctctcta
gttgcttggacgacaaccccttggactctgcctagcaacctggccctctgtgtcaaccca
gacttgcaatatgtgaaggtggaagataaaaatacagggaagattttcattttgatggaa
gctcgactggcatccctgtacaaatctgaaactgaatatgcaatacttgacaggtttcct
ggtgttacccttaaagggaagaaatataaacctcttttcaagtattttatcaagtgcaaa
gaaaatggtgcttttactgtagtgactgacaactatgtgaaggaagaagaaggtactggg
gttgtacatcaagctccttactttggcgctgatgactacagagtctgtatggattttaat
atcattcggaaagattcagtaccagtttgtcctgttgatgcctcgggctgtttcacagca
gaagtgacagactttgctggacaatatgtgaaggatgcagataagaacatcatcagattc
ctaaaagaacaaggaagactggtccataccagctcttataagcacagctatcctttttgc
tggaggtcagatactcctctaatatacaaagctgtgccaagctggtttgtccgtgtggag
cacatggtggagaagttgctggaaaataatgcccagtgctactgggttcctgactttgtg
agagagaagcgttttggaaattggttgagagaggcacgtgactgggcaatttcacgaaat
cgatactgggggacgccaatcccattgtgggtcagtgatgattttgaagaggtggtctgt
attgggtctgtagcagaactggaagagctgtcagaagtgaaagtgactgatctccacaga
gaaagcgttgattatataaccatcccctcgcgctgtggcaaaggtgtattgcatcgtgtt
tcagaagtgtttgactgctggtttgagagtgggagcatgccttatgcccaagtccattac
ccatttgagaacaaaagagaatttgaagatgcgtttcctgctgacttcattgctgaaggc
attgaccaaaccagaggatggttttacacattgctcgtgttgtccacagctctttttggg
aagccccctttcaagaatgtaattgtaaatggcctagttcttgccagtgatgggcaaaag
atgagcaaaaggaagaagaattacccggatccagcaaacattgtaaattcttatggggct
gatgctctaaggctgtaccttatcaattctcctgttgtgagagccgaaaacttgaggttt
aaagaagaaggtgtgagagatgtgctgaaggatgtcttcttgccatggtacaatgcatat
cgctttctcattcagaacgttgtcattctgcaacttaaggaagatggaaaggaattcctt
tacaatgagaatacagttaaagaaagcaacaatatcatggataaatggattctttccttt
gcacagtcactcattcagttcttcaaagcagaaatggcagcctacagactgtacacggta
gttcctcgtctcgttaagtttgtagacattcttaccaactggtatgtcagaatgaatcgc
aggaggttaaagggtgaaaatggaacagatgactgcattatggccttagaaaccttattc
agcgttcttcactcaatgtgcagacttatggcaccttatactccatttatcactgaactg
atgtaccagaatttgaagactcttattgatcctgcctgcattcaggagaagaacacagat
agcattcactacctcatggttcctcaagttcgagaggatctgattgacaaaaatatagaa
agtgccgtttcccgaatgcaatctgttgttgaacttggacgggtaatcagagacaggaaa
accattccagtaaagtatccactgaaagaggtggtggttattcatcaggatccccaggcg
ctggaagatatcaagtccttggaaaagtatatacttgaggaactgaatgtccgtcaagtg
acattatcaactgagaaagataaatatggaatccgcctaagagcagaacctgatcacatg
gtgcttgggaagcgtctgaaaggtgcctttaaatctgttatggctgctgtgaaggaattg
aaaagtgagcagttggaagaattccagaagactggcaccattgttgtagaaggtcatgaa
ctgcatgaagaagatctccgtctgatgtacacctttaaccaggctgaaggaggatctgcc
caatttgaagcacattctgattctcaggttttggttctcctggatgttactcccgatcag
tctatggttgatgaaggcgttgcacgtgaagtaataaatcgcatccagaaacttcggaag
aagcgcaatcttgttccaactgatgagattacagtgtattaccgtgctcatccagaaggt
gattatcttgatactgttattaaggagcatacagatttcatttttgcaacaataaaggct
gccttgaagccatacccagtgcctacctcaacggaagtgcttattcaagagaaaacccag
ctgaagggatcagaactggagattacactagccaaaggtgctctgaatcatcgcattgag
ccagcatgtgcttatgtcaatctgaacatctctgtgaatgggaaagagcaagctggtacg
gtgttgctggaaaatcccaaaggagataatacattagacttcgccaaacttgttaacacc
atttcatgcatttttggtcttgaaaattcaaagttagcagttttcaatggaaaaacagaa
ctgaaaaaccaaacagacttgctgagtctcagtggaaagatgcttcatgtaactgcgggg
tcagtgccagccttgaacagtcttgatggcttcctctgtcagtatatcaatttacaacta
gtgaatgcaaaaccacaagagtgtctgaatggattggtgggaactcttctaatggaaaat
ccggttggtcagaacggactcacatatcaagggcttctgcatgaaacggggaaagtcttt
ggactcagaagcagacggctaaaattgttcctcgatgaagcgctgacagaagagattaca
aggaatacctccatgaaaactttaaatacgaagacggtgtatgttcatgctgcaccaaca
acagctgaatgttga
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