Podarcis raffonei (Aeolian wall lizard): 128408407
Help
Entry
128408407 CDS
T09310
Symbol
PLXND1
Name
(RefSeq) plexin-D1
KO
K06822
plexin D
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
128408407 (PLXND1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
Sema
PSI
TIG_plexin
PSI_PlexinA-B
TIG_2
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
128408407
NCBI-ProteinID:
XP_053234057
LinkDB
All DBs
Position
2:89488467..89637771
Genome browser
AA seq
2020 aa
AA seq
DB search
MVSSPGRRGASQVLPRGDRLLPAFPLVLLLLPVLPVPGLEVQHKFVSLTATNNFALDASG
GKVYLAAVNRLYQLSGPNLTLEVEEQVGPKEDNPLCHAPQLPQASCEHARKPTDNYNKLL
QPDPEQGILVVCGSVYQGFCQLRSMDNISVVAVAFPPGAGGGGGGGDQVTVFPSMLNVAA
NHANASTVGLVLKQAGQDTRLLVAATYTGLGSPFFPRNASLEDHRFENTPEIAIRALDAR
GDLARLFTFDINPSDDNIFKIKQGAKERHKLSFVRAFLHRGARPPPSQPPPSRPGEEKGA
PSGRSPYAGPGASLLPGGAPARSGLPLSPPAGASLGRYAYLALNSEANAREKESHSHSLL
ARICLGDPAEATTLNGSSGGGGGAETKKLTESYIQMGLQCSSGAWRGGGAASGAAGGGGG
DLFNRLVSVFPASAALQVGSGSASPPRPEELLFGVFEKASSSSSSGTGFGGRQAPQPSAL
CVFRFAEIEEAIRVARNSCFVAPDAGLVTVLDSVVQGTGPACEKRKIQLQPEQLDCGAAH
LQHPLSILQPIKARPVFTSPGLTSVAVTSVNNYTVVFLGTANGRLLKINLNSSMEEISRE
SITVAYGEPVHPIMQFDPSDSSYLYLMTSHQIARVKVAACDQYTTCTECLAAADAYCGWC
TLETRCSLQHECANSSEPNFWISASEGVQQCPSMTILPSEINIEKENKGMIIQINGNIPS
LNGMEMSCNYGNNISTVAKVAAHSWSQFVYCNFLPREKYPAFPYNQDHVIVQTAVQVNGK
NIVWANFTIYDCKRTGNIYPKTACITCLSAKWKCYWCTRKYTCVSNSTECEDSIQMNNST
DCPQIVPSSVAPAPTGTSQDIVITLMNTAFIKEMPLECHFQTDKIFEAQWVNASAVQCSN
VLLHTSDKRHLFPLNLQLKEKPNRYIDSPALMTVEIYNCAIGSADCSQCLGREDLGHQCI
WSESSSNCRLNTESLQIPGMCPPPEIKKIEPLNGPLEGGTLVTIRGRNLGRRFSDVINAV
KIGNVKCSPLPDRYIVSEEIVCWTGEAPDEFSDVVTVNLSREGKSRDRYSYVLPVVKFMS
PSTGPKAGGTRVTITGNNLSVGSELRVLVNNTKECEDLSRTDTSITCTMPGVEFTTTVKV
CVQFERKSCIGDNSTFKYEKNPSIRDINPKRSQISGGRIITVEGNGFLMVQNVSMVVLNV
GKEQTNCKVHTDTVITCPSPAASNLTGSKPAPVDFYINGRLYTDDSLFPFEHPEEAIHIS
KFHLEYYMDPQFFTAKKEKWIKHHPGEPLTLVIHKEPDNLGLESNEYEVKIGLISCEIQI
VSDKVIHCSVNESLSTSERQLPVTIQVGKFNQTIAMLHLGGSETAITVSIVICSILLLLS
VVALFVFCTKSRRAERYWQKTLLQMEEMESQIREEIRKGFAELQTDMTDLTKELNRSQGI
PFLEYKYFVTRTFFPKCSSLYEERYILPSQHLNSQMGSQVQETHPLLLGEWKIPENCRPN
MEEGIALFSTLLNNKHFLNVFVHALEQQKDFAVRDRCNLASLLTIALHGKLEYYTSIMKD
LLVDLIDASASKNPKLMLRRTESVVEKMLTNWMSICMYSFLRETVGEPFFLLLCAIKQQI
NKGSIDAITGKARYTLNEEWLLRENIEAKPRNLNVSFQGCGMDSLSVRVMDTDTLSQVKE
KILEAFCKNIPYSQWPRVEDVDLEWFATSTDSYILRDLDDTSVMEDGRKKLNTLAHYKIP
EGASLAMSLTDKKDTTLSRVKDLDTEKYFHLVLPTDDLNESKKSHRQSHRKKVLPEIYLT
RLLSTKGTLQKFLDDLFKAILSFRDDKPPLAIKYFFDFLEEQAEKRGISDPDTLHIWKTN
SLPLRFWVNILKNPQFVFDIDKTDHIDACLSVIAQAFIDACSISDLQLGKDSPTNKLLYA
KEIPEYRKIVQRYYKQIHDMPPLSEQEMNAHLAEESRKYRNEFNTNVAMTEIYKYAKRYR
SQIVNALDSNPTTRRTQLQHKFEQVIALMEDNIYECCSEA
NT seq
6063 nt
NT seq
+upstream
nt +downstream
nt
atggtttcttcgccgggtcggcgaggcgctagccaggtgctgccgcggggcgatcgcctt
ctcccagcctttcccctcgtgctcttgctgctcccggtgctcccggtgcccgggctggaa
gtgcagcacaagttcgtctcgctcacggccaccaacaacttcgctctggatgcttcggga
ggcaaggtgtacctggcggccgtcaaccggctctaccagctgtcgggccccaacctgacc
ctggaggtggaggagcaggtgggacccaaggaggacaacccgctttgccacgctccgcag
ctgccccaggcgtcgtgcgagcacgcccggaagcccaccgacaactacaacaagctgctg
cagcccgacccggagcaaggcatcctggtggtgtgcggctccgtctaccagggcttctgc
cagctgcgcagcatggacaacatctccgtcgtggccgtcgctttcccgcccggggcaggt
ggaggcggcggcggcggggaccaggtcacggtgttccccagcatgctcaacgtggcggcc
aaccacgccaacgcgtccaccgtgggcttggtgctcaagcaggccgggcaggacacgcgc
ctgctggtggccgccacttacacgggcttgggcagccccttcttcccgcgcaacgccagc
ctggaggaccaccgcttcgagaacacgcccgagatcgccatccgcgctctggacgcccgc
ggggacctggcgcgcctcttcaccttcgacatcaacccctccgacgacaacatcttcaag
atcaagcagggcgccaaggagcgccacaagctcagcttcgtgcgcgccttcctgcaccgc
ggagcccgaccgccgccgtcgcagccgccgccttctcgccccggcgaggaaaagggcgcc
cccagcggccggagcccctacgcggggcctggggcctcccttctccccggcggcgcccct
gcccggagcggcctcccgctctcgcctccggcgggcgcctcgctcggccgctacgcctac
ttggccctcaacagcgaggcgaatgcgcgggaaaaggagagccactcgcacagcctgctg
gcgcgcatctgcctgggcgacccggccgaggcgacaactctgaacggcagcagcggcggc
ggcggcggcgcggagaccaagaagctgaccgagtcctacatccagatggggctgcagtgc
agcagcggcgcctggcgcggaggtggggcggcgtcgggggcggccggcggcggcggcggc
gacctcttcaaccggctggtgtcggtcttccccgccagcgccgccctgcaggtgggctcg
ggaagcgcttcgccgccccggccggaggagctgctcttcggggtcttcgagaaggcctcg
tcctcctcctcctccgggacggggtttgggggccggcaagcgccccagccctcggcgctg
tgtgttttccgcttcgccgagattgaggaggccatccgggtggccaggaactcttgcttc
gtggctcccgacgccgggctggtcacggtgctcgacagcgtggtgcaaggcaccgggccc
gcctgcgagaagaggaaaatccagttgcaaccagaacagttggactgtggagcagcgcat
ctccagcatccattgtcaatcctgcaacctatcaaggccaggccagtgttcacttcgcca
ggacttacatcagtagctgtcaccagcgtcaataattacacagttgtatttctgggaaca
gccaatggaagactgctcaagattaatctgaacagttctatggaggagataagcagggag
tcaattactgtggcttatggtgaacctgtccatcccatcatgcagtttgatccttctgac
tccagctacctgtatctaatgacttcccaccagatagcccgtgtgaaagtagctgcctgt
gatcaatataccacatgtacagagtgcttggctgcagccgatgcttactgtggatggtgc
accttggagaccaggtgttccctgcaacatgagtgcgctaattcttctgaacccaatttc
tggataagtgccagcgaaggagtgcagcagtgtccgtcaatgaccatactgccctcagaa
ataaacattgagaaagagaacaaaggcatgataatccaaataaatgggaatattccaagt
ttgaatggaatggagatgtcttgcaattatggaaataatatatccactgtagctaaagtt
gctgcccactcttggagccagtttgtttattgcaattttcttcctagagaaaaatatcca
gccttcccatacaatcaagatcatgtgattgttcaaactgctgtacaggtcaacggcaaa
aatattgtgtgggccaatttcaccatctatgattgcaagagaactggaaacatttatcca
aagacagcatgtatcacctgcctctcggctaaatggaagtgttactggtgcactagaaaa
tacacctgtgtctccaattcaactgaatgtgaggactcaatacagatgaataacagcact
gattgtccacagattgtaccttcctctgttgcaccagcaccaacagggacttcccaggac
attgtcatcaccttgatgaatactgctttcataaaggagatgcctttggaatgtcatttt
caaactgacaagatatttgaggcccaatgggtgaatgcatctgctgttcagtgcagcaac
gtactgcttcacacttcagacaaaaggcacctctttccactaaaccttcagctgaaggaa
aaacccaatagatacattgatagtccagcgctgatgacagtggagatttataattgtgca
attggaagtgctgactgttctcagtgtcttgggagagaagatctgggtcatcagtgcatt
tggagcgagagcagttctaattgtagactaaacactgagtccctccagattccaggcatg
tgtcctcctcctgagattaagaagatcgagcccctgaatggacccctggaaggaggaact
ctagtcacaatacgaggaagaaatctgggccgtaggttcagtgatgtcattaatgctgtc
aaaatagggaatgtgaagtgttcgccgctcccggacagatatatcgtctctgaggaaatt
gtgtgctggactggagaagctccagatgaattttctgatgtggtgacagttaatttgagc
agagaaggaaaatccagggaccgatactcttatgtgcttccagtagtgaagtttatgtct
ccatctactggccctaaagcaggaggaaccagagtaaccatcacagggaataacctgagt
gtgggatctgagctccgagttttggttaataacacaaaagaatgtgaagacctcagtcgc
actgacactagcatcacttgcaccatgccaggtgtggaatttactaccactgtgaaagtc
tgtgtccagtttgaaaggaagtcctgtattggtgataacagcaccttcaagtatgagaaa
aacccaagtataagagatatcaaccccaaaaggagtcagatcagtggaggcagaatcatc
accgtggaaggaaatggattcttgatggttcagaatgtgtctatggttgttctcaatgtt
ggaaaagaacaaacgaactgtaaggttcacacggacactgtgattacctgcccttctcca
gctgcttccaacctcaccgggagcaagccagcacctgtggacttctacatcaatggacgc
ctgtataccgacgacagccttttcccttttgaacacccggaggaggccatacacattagc
aagttccacttggaatactatatggacccccagttcttcacagccaagaaggagaaatgg
atcaaacaccatccaggagagcctttgacgctagttatacataaagagcctgacaacctt
ggcctggaaagcaacgagtatgaagttaagattggcttaatttcctgcgagatccaaata
gtttcagataaagtaattcactgctcagtcaatgaatctttgagcacctcagaaagacaa
ctccctgttacgatccaggttgggaaattcaatcaaacaattgctatgttgcaccttgga
ggaagtgagacggcaatcactgtttccatagtcatctgtagtatcttgctgctgctctct
gttgtagccctgtttgtgttttgcaccaagagtcgcagggcggagcgttattggcaaaag
actcttctgcagatggaagagatggagtcccagatccgagaagaaatccgtaaaggtttt
gcagaactccagacagatatgacagatcttaccaaggagttaaatcgcagtcaaggaatc
ccattcctggaatacaagtactttgttacacgaacattctttcccaaatgttcctccctc
tatgaagagcgttacattctgccttcccagcaccttaattcccagatgggctctcaggtg
caagaaactcacccattactgttgggagaatggaagattcctgaaaattgtagacccaac
atggaagaaggaattgcgttgttctcaaccttactcaacaacaagcactttctcaatgtc
ttcgtccacgctcttgagcagcagaaagattttgctgttagagacagatgcaacctggcc
tccttgctcaccattgcgttgcatgggaaactggagtactacaccagcatcatgaaggac
ctcttggttgatctcattgacgcgtctgcctccaaaaaccccaagcttatgctgaggagg
acagaatctgtagttgagaagatgctgaccaactggatgtccatctgcatgtatagcttt
cttagagaaactgttggggagcccttcttcctcctgctctgtgcaatcaagcaacagatc
aataaaggctccatagatgccatcactggaaaagccaggtatactctcaacgaagaatgg
ctattgagagagaatattgaagcaaagccaaggaatcttaatgtgtctttccaaggctgt
gggatggattcactgagtgttcgggtcatggatacagacactctcagccaggttaaagag
aagatacttgaagccttttgcaagaatattccatattcccagtggcctagagtagaagat
gttgatcttgaatggtttgccacaagcactgacagctacatcctccgggacctcgatgac
acttcagtgatggaggatggcaggaagaaactgaacacactagcacattataagatccct
gaaggtgcctccctagctatgagtttaactgataagaaagatactactttaagtagagtg
aaagatctggacactgaaaaatactttcatttggtccttcccacagatgacctgaatgag
agtaagaaatctcatcgacagagtcacaggaaaaaagtcctccctgaaatctacctgacc
agattgctgtccacaaagggcacactacaaaaattcctggatgacttattcaaagccatt
ctgagtttccgagatgacaaacctcctctggctatcaagtatttctttgatttcctggaa
gagcaagcagaaaagagagggatctctgacccagacacattgcacatttggaaaacaaac
agcctacctctgaggttttgggtcaacattctgaagaacccccagtttgtttttgacatc
gacaaaacggaccacatagatgcctgcctttctgtaatagcccaggcctttatcgatgcc
tgctccatctctgacctgcaattgggcaaggactcgcctacaaataaactgctgtacgcc
aaggagattccagaatatagaaaaatagtgcagaggtattacaaacagatccatgacatg
ccacctctcagtgaacaggaaatgaatgcacacttggcagaggaatccaggaaatatcgg
aatgagtttaacaccaatgttgccatgactgaaatttacaaatatgccaagagataccgc
agtcagatagtgaatgcgctggactccaaccccacgacgaggcgcacacagctgcagcac
aaatttgagcaagtgattgcactcatggaagacaacatttacgaatgctgcagcgaggca
tag
DBGET
integrated database retrieval system