Podarcis raffonei (Aeolian wall lizard): 128409197
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Entry
128409197 CDS
T09310
Symbol
ABCD4
Name
(RefSeq) lysosomal cobalamin transporter ABCD4 isoform X1
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf02010
ABC transporters
praf04146
Peroxisome
praf04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
128409197 (ABCD4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
128409197 (ABCD4)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
128409197 (ABCD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
praf02000
]
128409197 (ABCD4)
Enzymes [BR:
praf01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
128409197 (ABCD4)
Transporters [BR:
praf02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
128409197 (ABCD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_30
AAA_16
AAA_22
AAA_29
AAA_7
T2SSE
nSTAND3
AAA_23
FtsK_SpoIIIE
DUF815
Motif
Other DBs
NCBI-GeneID:
128409197
NCBI-ProteinID:
XP_053235417
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Position
1:31682816..31742163
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AA seq
607 aa
AA seq
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MAPRAAAPGSARPRPQLDRQFLQRFLKIQEILFPACCSKNVLMFLTLLMVALLEQLVIYQ
VGLIPSQYYGVLGNKDFHGFQQVTAVALILILLNSMLKSFDQFIRNLMYVSWRKTLTEYL
HGYYFQGQVYYTLNILHEEIDNPDQRISQDVERFCKQLSSMASKLIISPFTLAYYTYQCF
YSTGWMGPVSIFGYFIMGTIVNKILMSPIVSKLVQQEKLEGDFRFKHMQLRVNAESAAFY
RAGEVEHMRTNRRLQTLLQTQRELIGKELWLYIGINTFDYLGSILSYVVIAIPIFNGVYA
DLDPAGLSSLVSKNAFVSLYLIGCFSQLIDLSTTVSDVAGYTHRIGELLEMLLKLSRKQN
DCDSPGKWEFNSVSKEEVVSSDTAFLLEKISLSAPSEKLLIKDLNLRVTQGNNLLITGNT
GTGKTSLLRVLGGLWESKQGDVHMLTCFGPHGVVILPQRPFFTDGTLREQVIYPLKEIYP
VSGSSDDERILRFLELTGLSDLLPRTGGLDQPVDWNWYDILSPGEMQRLSFARLFYLQPQ
YAVLDEATSALTEDAEDELYRICAHLEMTLVSVGHRKSLEKFHSWRLNLYGEGKWELSRI
KKDRATP
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggctcccagggcagcagcgccgggaagcgcccggcctcggccccagctggaccggcag
tttctccagcgttttctgaagatccaagaaattttatttcctgcatgctgctccaagaat
gtactgatgttcctaaccttgctcatggttgctctgttggagcagctggtcatttaccag
gtgggattgattcccagccagtattacggagttctggggaacaaagacttccatggattc
cagcaagtgacagcagttgcactgattcttattctactgaactctatgctgaagagcttt
gaccagttcatccgcaacctgatgtatgtgagctggaggaagactctcacagaatacctc
catggctactactttcagggccaggtgtattataccttgaatattctgcatgaggaaatc
gataatccagatcaaagaatcagccaggatgtggagaggttctgcaagcagctgagctcc
atggccagtaagctcatcatctctcccttcacgcttgcttactacacctatcagtgcttt
tacagcactggctggatgggcccagtgagtatttttggatattttatcatgggcacaatt
gttaacaagatcctaatgagccccattgtttcaaagctggtgcagcaggagaagctggaa
ggtgatttcaggtttaagcatatgcagctacgggtgaatgccgaatctgctgctttttac
agagctggggaagttgagcacatgcgaaccaaccgcaggctgcaaaccctcctgcagacc
cagagggagctgataggcaaggagctgtggttgtacattggaatcaacacttttgactat
ctgggcagtatcctgagttatgtggtgattgccattcccattttcaatggagtttacgct
gatctggatccagcaggactgagctctttggttagcaagaatgcctttgtctctctttac
ctcattggctgctttagccagctcattgacctctccaccactgtgtctgacgtagctggc
tatacacacagaattggggagttgctggagatgctgctgaaactttccaggaagcaaaat
gactgtgactcgccaggcaaatgggaattcaacagcgtttccaaagaggaggtggtctca
agcgacacagctttcctcctggagaaaatctctctctctgctccctctgagaagctgctc
attaaggatctaaacctgagagtcacgcaggggaacaatctactgatcaccgggaacaca
gggacagggaagacatctttgctgcgtgtcctcggtggcctttgggagagcaagcagggg
gacgtccacatgctgacttgctttggcccccatggggtggttatcctgccacagcggcca
ttcttcacagatgggaccctgcgggaacaggtgatatatcctctgaaggaaatctatcca
gtttcggggtcttcggatgatgaaaggattctgagattcctggagctgactgggttgtct
gatttgctaccaaggacaggtggtttggaccagccagtggactggaactggtatgatatt
ctgtctccaggggagatgcagaggctctcctttgcccgacttttctatctccagcctcag
tatgcagtgctggatgaagctaccagcgcactcacagaggatgcagaggatgagctgtac
aggatctgtgcacacctggaaatgactctggtcagcgtgggacatcgcaagagcctggaa
aagtttcacagttggcgtctgaacttgtatggagaaggtaaatgggagctcagcagaata
aagaaagaccgagccactccctga
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