Podarcis raffonei (Aeolian wall lizard): 128409344
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Entry
128409344 CDS
T09310
Symbol
TAP1
Name
(RefSeq) antigen peptide transporter 1
KO
K05653
ATP-binding cassette, subfamily B (MDR/TAP), member 2 [EC:
7.4.2.14
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf02010
ABC transporters
praf04145
Phagosome
praf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
128409344 (TAP1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128409344 (TAP1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128409344 (TAP1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
praf02000
]
128409344 (TAP1)
Enzymes [BR:
praf01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
128409344 (TAP1)
Transporters [BR:
praf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
128409344 (TAP1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
ABC_ATPase
AAA_22
AAA_16
AAA_21
AAA_25
AAA_15
RsgA_GTPase
AAA_30
AAA_5
AAA_33
AAA_23
Rad17
Motif
Other DBs
NCBI-GeneID:
128409344
NCBI-ProteinID:
XP_053235687
LinkDB
All DBs
Position
2:121020497..121035810
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AA seq
735 aa
AA seq
DB search
MKPSWLPWVWILPVALLDFFTLRLAWHLLKLPWWSPLEASWAAALARCLLLTLSVCAATC
CGGPGGPGALQDSLLPAALLLSFLVPCYTTLQYLFLSEGVALELAHSWARADVFALSYVV
VGASVLLWHHLAPRRKGEVETKSSASFWRLVATMRPDVLRFVAIAVLLVVSSLGEMAIPY
YTGHVTDWITGEADPSAFERALWVMSALTVGSALAEFVCDYLYNTTMNHFHTRFQSNVFR
AVLRQEVGFFHANKTGDITSRVTTDTDTMSEALSSDLSLLMWYLMRGVFLYAMMLWLSVP
LTLFVTVALPFILLVPKLSGKFHKNLALQVQESLAKANEVATETFQAISTVRSFANEDGA
ARRYDQKLQETYKLNKWEAVAYAASMWTSDLSGLALKVGILYYGGRLVTLGSVSSGELVT
FVLYEMEFSTAVRVLLSVSPRVEKAVGSSEKLFEYIDRTPQISSSGTLTPQDLQGHVLMR
DVSFSYPDREGPPVLKGVSLELRPGTVTALVGPSGSGKSTLVALLERFYEPQSGQVTLDG
RELSKYDHRFLHEKVALVSQSPVLFARSLHKNIAYGLGEKSREEVAGVARRVGAHQFIAR
MSCGYDTDAGETGGQISGGQRQGVAIARALIRDPRVLILDDATSALDMESQQKVEKEIYE
GEARRRRSVLLISHRLRSVECADRILVMEDGEIQEEGTHLELMEKKGVYWQLVQRQQNGA
EGNNNGFVDMDHKHL
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgaagccctcctggctgccctgggtctggatcctcccagtggcgctcctggactttttc
accctccgcctggcctggcatctgctgaagctgccctggtggagccccctggaggcgtcc
tgggccgctgccctggcgcggtgcctgctgctgaccctctcggtttgtgccgccacctgc
tgtgggggacccgggggcccgggggccctccaagacagcctcctgcctgcagcgctcctc
ctcagcttcctggtcccctgctacacaaccctgcaatacctgtttctgtctgaaggggtc
gccctagagctggcgcacagctgggcccgggcagatgtgtttgccctcagctatgttgtt
gtgggggcatctgtcctgttgtggcaccacctcgccccccgcaggaagggggaggtggag
acgaaatcttctgcgtccttttggcgccttgtcgccaccatgaggccagatgtgctgagg
ttcgtagccatcgctgtgctgctggtggtctcatccttgggggagatggcgatcccatac
tacacggggcacgtgaccgactggatcaccggtgaggccgacccctctgccttcgagaga
gctctctgggtgatgtccgccctcaccgttggcagcgctctggctgagttcgtgtgcgac
tatctctacaacaccaccatgaaccactttcacactcgcttccagagcaacgtcttcaga
gccgtcctgcgacaggaagtcggcttcttccatgctaacaagacaggggacatcacttcc
cgggtgacgactgacacggacaccatgagcgaggccctcagcagcgacctcagcctgctg
atgtggtacctgatgcgaggggtcttcctctacgccatgatgctgtggctgtcggtgccc
ttgaccctcttcgtcacggtggccctgcccttcatcctgctggtgccaaagctctctggg
aaatttcacaagaacctggcgctgcaggtccaggagtccctcgccaaggccaacgaagtg
gccacggagaccttccaggccatctccaccgtccgcagctttgccaacgaggacggtgcc
gctcggcgctatgaccagaagctgcaggagacctacaagctgaacaagtgggaggccgtg
gcctacgcggcctccatgtggactagcgacctctccggcctggctctcaaggtggggatt
ctctactacggagggcgcctggtcactttgggaagcgtcagcagcggagaacttgttacg
tttgtcctctacgaaatggagttttccacagcagtgagggtcctgctctccgtttctcca
cgtgtagaaaaagctgtgggctcctctgagaagctttttgagtacatcgaccggacaccc
cagattagctcttcggggacgctaacaccccaggatctgcaggggcacgttttgatgcga
gacgtctcgttctcctaccccgaccgggaaggccctcctgtgctgaagggagtgtcccta
gagctgcgccctggcacggtgactgccctggtgggcccttcgggatcgggcaagagcaca
cttgtggctttgctggagcggttctacgagccccagagcgggcaggtgaccctggatggc
agagagctgagcaaatacgaccaccgtttcctgcatgaaaaggtggcgctggtgagccaa
agcccggtgctctttgcccggtccctgcacaagaacattgcttacggcttgggggagaag
agccgggaggaagtggcaggggtggccaggcgagtgggagcacatcaattcattgccagg
atgagctgcggctatgacacagatgctggagaaacggggggccagatctctggtggccaa
aggcagggggtcgccattgcccgggctctgatccgagacccccgagtgctgatcttggac
gatgccacgagcgcccttgacatggagagccagcagaaggtagagaaggagatctacgaa
ggggaggctcgccgcaggcgctctgtcttgctcatctcccaccgcctgcgcagcgtggag
tgtgcagaccgcatcctggtcatggaagatggggaaatccaggaagaagggacccacctg
gaactgatggagaagaaaggcgtctactggcagctggtgcagaggcagcagaatggagct
gagggcaataacaatggctttgtggacatggaccacaagcatctatag
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