Podarcis raffonei (Aeolian wall lizard): 128409467
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Entry
128409467 CDS
T09310
Name
(RefSeq) H-2 class II histocompatibility antigen, E-S beta chain-like isoform X1
KO
K06752
MHC class II antigen
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04145
Phagosome
praf04514
Cell adhesion molecule (CAM) interaction
praf04672
Intestinal immune network for IgA production
praf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
128409467
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128409467
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
128409467
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128409467
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
praf04147
]
128409467
Exosome [BR:
praf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128409467
Exosomal proteins of epithelial cells
128409467
Exosomal proteins of breast milk
128409467
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_II_beta
C1-set
Ig_3
Motif
Other DBs
NCBI-GeneID:
128409467
NCBI-ProteinID:
XP_053235958
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All DBs
Position
2:complement(125304632..125317251)
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AA seq
278 aa
AA seq
DB search
MGGSGAAPLAFGGLLLGMLVVSASEGLGVEAPPEHFLFQKKGECHFSNGKQRVHFLQRDF
FDRQELFYFDSDREKFMAVAELAESQVKIWNQDKDALRGMMSNVDACRLNYEIFDPFSQA
RRVQPQVKITPTDNDESSPHNTLLICTVNRFFPAGIEIKWFRNGKEEPKVWTTDLIRNGD
WTFHIEDSSVRLRCSIRILGCGEALFFLPVALCPCSEVETSLEGGWKESQIKNDSVHPSP
TSVACVSFGGSFFLCFPFRLLWQGCKLWQPVSFFAPLC
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggggggctccggcgctgcgcctttggcctttggggggctcctgctggggatgctggtg
gtctccgcttcggaggggctgggcgtggaggcgcctccagagcatttcctgttccagaag
aagggcgagtgccacttctccaacgggaagcagcgtgtccacttcctacaaagggacttc
tttgaccggcaggagctcttctacttcgacagcgaccgagagaagttcatggcggtggct
gaactggcggagtcccaagtcaagatatggaaccaggacaaggatgccctgcggggtatg
atgtccaacgtggatgcctgccggctcaactacgagatcttcgatcccttctcccaggcc
cggcgtgtccagccccaggtgaagatcacccccacagacaacgatgaatcttcaccacac
aacactctgctgatttgcaccgtgaaccgcttcttccctgcggggatcgagatcaagtgg
ttcaggaacgggaaggaggagcccaaagtgtggaccacggacctcatccggaacggggac
tggaccttccatattgaggactcatcagttagacttcgctgctccatcaggatcctggga
tgtggagaagctctgttcttcctgccagttgccctctgtccatgctcagaggtggaaacc
tccttggaaggtggatggaaggagtcacagatcaagaacgacagtgtccacccatccccc
acctctgttgcttgcgtgtcatttgggggaagtttctttttgtgtttccccttccgcttg
ttatggcaaggttgcaagttatggcaacctgtttccttctttgcacctctctgctag
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