Podarcis raffonei (Aeolian wall lizard): 128409475
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Entry
128409475 CDS
T09310
Name
(RefSeq) HLA class II histocompatibility antigen, DR alpha chain-like
KO
K06752
MHC class II antigen
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04145
Phagosome
praf04514
Cell adhesion molecules
praf04672
Intestinal immune network for IgA production
praf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128409475
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128409475
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
128409475
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128409475
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
praf04147
]
128409475
Exosome [BR:
praf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128409475
Exosomal proteins of epithelial cells
128409475
Exosomal proteins of breast milk
128409475
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_II_alpha
C1-set
Ig_3
Ig_2
ig
GH101_N
Motif
Other DBs
NCBI-GeneID:
128409475
NCBI-ProteinID:
XP_053235968
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All DBs
Position
2:125317994..125321731
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AA seq
264 aa
AA seq
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MDPRGGRGGGGGRRALCCLWATLLLAPPRGAGALKVEDTLVELDFFQESFPSEKKSGEFL
LEFDNEEILHVDWEKKQNVWRLPDFQRFTSFEVQGALANIAVMKNNMEVLMKRSNRTRAL
NVAPSATVYPENAVELGDPNILICFVDRFSPPVLNVTWLKNNEVVSEGVEETDFYPSVDN
TFRKFSYLPFVPEQGDIYVCQVEHWGIPEGKMEKIWVSKAPSPIPETMENVLCALGLAFG
ILGIIAGTILFFKAMRMNDRRGFI
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggaccccagaggaggaagaggaggaggaggaggaagaagagccctttgctgcctctgg
gcgaccctcctcctcgccccgccaaggggggccggagccctgaaagtggaggataccctg
gtggagctggacttcttccaggagagcttcccttcggagaagaagtccggggagttcctg
ctggagtttgacaacgaggagatcctgcacgtggactgggagaagaagcagaacgtctgg
aggctgccggacttccagcgcttcaccagcttcgaggtgcagggcgccctggccaacatc
gccgtcatgaagaacaacatggaggtgctcatgaagcgaagcaaccgcacccgtgccctg
aacgttgctccttcggccactgtgtacccggaaaatgccgtggaactgggggaccccaac
atcctcatctgctttgtggacaggttctcccccccagtgctgaacgtcacctggctgaag
aacaacgaggtggtctccgagggcgtggaggagacagacttctaccccagcgtggacaac
actttccgcaagttctcctacctccccttcgtccctgagcagggagacatctacgtctgc
caggtggagcactggggcatcccagagggaaagatggagaagatctgggtttccaaggcg
ccctctcccatcccggagacgatggagaacgtgctgtgtgccctgggcttggcctttggc
atcctgggcatcatcgctggcaccatccttttcttcaaggccatgaggatgaacgatcgc
aggggcttcatataa
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