Podarcis raffonei (Aeolian wall lizard): 128410615 Help Entry 128410615         CDS       T09310                                  Symbol THBS1 Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism praf  Podarcis raffonei (Aeolian wall lizard) Pathway praf04115   p53 signaling pathway praf04145   Phagosome praf04148   Efferocytosis praf04350   TGF-beta signaling pathway praf04510   Focal adhesion praf04512   ECM-receptor interaction praf04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:praf00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     128410615 (THBS1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     128410615 (THBS1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     128410615 (THBS1)    04148 Efferocytosis     128410615 (THBS1)   09143 Cell growth and death    04115 p53 signaling pathway     128410615 (THBS1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     128410615 (THBS1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     128410615 (THBS1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:praf04131]     128410615 (THBS1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:praf00536]     128410615 (THBS1) Membrane trafficking [BR:praf04131]  Endocytosis   Phagocytosis    Opsonins     128410615 (THBS1) Glycosaminoglycan binding proteins [BR:praf00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    128410615 (THBS1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 TSP1_ADAMTS cEGF TSP1_CCN EGF Motif Other DBs NCBI-GeneID:  128410615 NCBI-ProteinID:  XP_053238064 LinkDB All DBs Position 1:41693608..41713479 Genome browser AA seq 1176 aa AA seqDB search MELPGGLFLLLMLGVCATNRIPENGDDDSVFDLFELIGFTRKGARKALGVHPVKGPETSS PAYRIDDANRIPAVPDYKFQDILDAIQAEKGFILLANLRPMKKIPGTLLAVERKDSSGYV FKLVLNGKAKTLDLSVFPKEGNQSLVSVEEVELPNAQWNNITLLVQEDQAQLYVGCEKLM NVELEIPIQNILTRDLASSARLRIAKGGVNDNFQGMLQNVRFVFGTTVEAILRNKGCESS TRRVIILDNPMNGSRPAIRTNYIGHKTKDIQAICGFSCDELNNVFIELQSLRALVTTLKD SVSKMDGIFQEVGATRYRTSPGVCIHNDVMYQNTAEWTTDSCTTCTCQNSVVMCHKVSCP LMPCSNATVPDGECCPRCWPSDYADDIWSPWSEWTTCSVTCGNGIQQRGRSCDRINHRCE GSSVQTRICNMQECDKRFKQDGAWSHWSPWSSCSVTCGTGVITRIRLCNSPLPQMNGREC EGEARENKPCQKDPCPINGNWGPWSPWDTCPVTCGGGLQQRGRLCNNPAPQYGGKDCIGD AKDTQICNKQDCPIDGCLSNPCFAGATCTSFPDGSWKCGACPAGYRGNGIKCKDIDECQE VPDACFVLGGVHRCENTEPGYHCLPCPPRFSGPQPFGRGVENAIANKQVCKPRDPCKDGT HDCNKNAKCTYLGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNTNLPCVANATYHCS KDNCPNLPNSGQEDYDKDGIGDACDNDDDNDNIVDDRDNCPFIYNPQQYDYDRDDVGDRC DNCPYNHNPDQIDTDNNGEGDACAVDIDGDGILNERDNCQYVYNVDQKDTDLDGVGDQCD NCPMEHNPDQTDSDSDRIGDKCDSNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDAC DHDDDNDGIPDDKDNCRLVANPDQLDSDGDGRGDACKDDFDQDKVLDIHDICPENVDISE TDFRRFQMVPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGYDEFNAVDFSGTFFI NTERDDDYAGFVFGYQSSSRFYVVMWKQITQSYWDPTPTKAQGYSGLAIKVVNSTTGPGE HLRNALWHTGNTPGQVRTLWHDPHHIGWKDFTAYRWRLSHRPKTGYIRVVMFEGKKIMAD SGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECKDP NT seq 3531 nt NT seq  +upstreamnt  +downstreamnt atggagttaccgggcggcctctttctcctcctgatgctgggggtctgcgcaacgaaccga atcccagaaaatggtgatgatgacagtgttttcgatctctttgagttgattggttttact cgcaagggagctcgcaaggcactaggagtgcatccagtcaagggacccgagacatccagc cctgcctaccgcattgatgatgccaaccgtatccctgctgttcctgactacaaattccaa gacattcttgatgccatccaagctgagaagggcttcatcctgttagcaaaccttcgccca atgaagaagatccctggcacgctgctggctgtggagcgcaaagacagctctggctatgtc ttcaagttggtgttgaatggcaaggctaaaaccttggacctgagtgtcttccccaaggag ggcaaccagagtctggtgtcggtggaggaagttgagttgcccaatgcacagtggaacaac atcaccctcctagtccaggaagatcaggctcagctctacgtggggtgtgagaagctgatg aatgttgagctggaaatccctattcagaacatcctcaccagggacctggccagcagcgcc agactccgcattgccaaagggggagtcaatgacaacttccagggaatgctgcagaacgtg cggtttgtgtttggaaccacagtggaagccatcctgagaaacaaaggctgcgaaagctcc accagaagagttattatattggacaatcccatgaatggctcccgtccagccatccgtact aactacattggccataaaacaaaagacatccaggcaatctgtggattctcctgtgatgaa ctaaacaatgtgtttatagaattgcaaagtctgcgtgccctggttacaacacttaaagat tcagtcagcaaaatggatggtatttttcaggaagtgggtgctactcggtataggacaagc cctggagtatgcatacataatgatgttatgtatcaaaacacagctgagtggacaacagat agttgtactacatgcacttgccagaactccgttgttatgtgccataaagtatcttgccct ctcatgccttgttccaatgccaccgttcctgatggagaatgctgcccacgatgttggccc agtgactatgcagacgacatttggtctccttggtctgaatggactacctgctctgtgacc tgtggcaatggcattcaacagagaggtcgctcttgtgatagaatcaaccatcgctgtgaa ggctcttctgtacagacacgaatttgcaatatgcaggaatgtgataagagattcaaacag gatggtgcctggagccactggtccccttggtcttcctgctctgttacttgtggaactgga gtgatcactagaatccggctgtgcaactctccactacctcagatgaatggcagagagtgt gagggagaggcaagagaaaacaaaccatgccagaaagatccttgcccaataaatggtaac tggggaccatggtcaccatgggacacctgtccagtcacctgcggagggggccttcagcag cgcggtcgtctctgcaacaatcctgcaccccagtatggagggaaggattgtattggtgat gctaaggacacccagatctgcaacaagcaggattgcccaattgatgggtgcctgtctaac ccttgctttgcgggagctacatgtactagttttcctgatggttcctggaaatgtggtgcc tgtcctgctggctatcgtggaaatggaattaaatgcaaagatattgatgagtgtcaagag gtcccagatgcctgctttgtccttggtggagtccacaggtgtgagaatactgagcctgga taccattgcctaccttgcccaccacgcttttctggaccacagccctttggtcgaggtgtg gagaatgcaatagcaaacaagcaggtctgtaaaccacgtgacccatgtaaggatggaact catgactgcaacaagaatgccaagtgcacttaccttggccacttcagtgaccctatgtat cgctgtgaatgtaagccaggctatgctggtaatggcattatctgtggagaagacacagac ttagatggatggccaaatacaaacctgccctgcgttgccaatgccacctaccactgcagt aaagataactgtcccaaccttcccaattctgggcaagaagactatgataaggatggaatt ggtgatgcttgtgataatgatgatgacaatgacaacattgtagatgacagagacaactgc ccattcatctacaacccacaacaatatgactatgatagggatgacgttggtgatcgctgt gataattgcccatacaatcacaacccggatcagatagacactgataacaacggagaagga gatgcgtgtgctgtggatattgatggagatggcattcttaatgaaagagacaactgccag tatgtatataatgtggaccagaaggatacagatttggatggtgttggagatcagtgtgac aactgtcctatggaacacaatccagatcagacggattctgactctgaccgcataggagac aaatgcgatagcaaccaggacattgacgaagatggccatcaaaataatcttgataactgt ccctatgtgcccaatgcaaaccaagctgaccacgacaaggatggaaaaggtgatgcctgt gatcacgatgacgataatgatggcatccctgatgacaaagacaattgcagactggttgcc aacccagaccaacttgactctgatggtgatggacgtggagatgcatgcaaagatgacttt gaccaagacaaggtgctggacattcacgacatctgccccgagaatgttgacatcagtgag acagatttccgccgatttcagatggttccactggatcctaagggcacatctcagaacgat cctaattgggttgttcgtcaccaaggcaaagaactggttcagactgtcaactgtgatcct ggacttgcagttggctacgatgaatttaatgctgttgatttcagcggcacattcttcatt aatacagaaagggatgatgattatgctggctttgtgtttggttatcagtccagcagccgt ttttacgtagtcatgtggaagcaaatcacccagtcttactgggatccaacaccaaccaaa gctcagggatattccggtcttgctatcaaagtagtgaactccaccacaggtcctggagaa cacctccgtaatgcactgtggcacactggaaatactcctggacaggtgcggactctgtgg catgaccctcatcatataggctggaaagatttcactgcctacagatggcgtctgagtcac aggccaaagactggttacattagagttgtaatgtttgaaggaaagaagatcatggctgat tctggaccaatctatgacaaaacctatgctggtggtcgtttaggattatttgtcttctct caagaaatggtgttcttctcagatcttaaatatgagtgcaaagatccgtga

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