Podarcis raffonei (Aeolian wall lizard): 128410837
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Entry
128410837 CDS
T09310
Symbol
GGPS1
Name
(RefSeq) geranylgeranyl pyrophosphate synthase isoform X1
KO
K00804
geranylgeranyl diphosphate synthase, type III [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf00900
Terpenoid backbone biosynthesis
praf01100
Metabolic pathways
Module
praf_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
128410837 (GGPS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
praf01006
]
128410837 (GGPS1)
Enzymes [BR:
praf01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
128410837 (GGPS1)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
128410837 (GGPS1)
2.5.1.29 geranylgeranyl diphosphate synthase
128410837 (GGPS1)
Prenyltransferases [BR:
praf01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
128410837 (GGPS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
128410837
NCBI-ProteinID:
XP_053238552
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All DBs
Position
3:78619544..78636919
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AA seq
370 aa
AA seq
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MEAGVGGARACADRPRWRIFPPIRRRWRLRRKGVGLCAHRHTGLRRAERRGSLRAGGDLG
RLNYSRIFFKMEQVEESSKRILLEPYNYLLQLPGKQVRTKLSQAFNHWLNVPEDKLQVII
EVTEMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIPSVINCANFVYFLGLEKVLTLDHPD
AVKVFTRQLLELHKGQGLDIYWRDTYTCPTEAEYKTMVLQKTGGLFGLAVGLMQLFSSYK
KDLKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQV
QNILRQRTENVDIKKYCVHYLEDVGSFEYTRKTLKELEAEAYKQIESLGDNPELTALLEY
LSKMFKDDEN
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgggggtaggaggagctcgcgcctgcgccgacaggccccggtggcgcattttc
ccccccattaggcgaaggtggcggttgaggcggaagggggtggggctctgtgcccaccgc
cacactgggctgagacgggcggagagaaggggctcgctccgggctggcggagacctcgga
agattgaactactccagaattttttttaaaatggaacaagtagaagagtcatctaagaga
attctgttggagccatacaactacctacttcagttaccaggaaagcaagtcagaaccaaa
ctctcccaagcttttaatcactggctgaatgttcctgaagataagctacaagttatcatt
gaagtgacagaaatgttgcacaatgcaagtttgcttatagatgacatagaagacaattca
aaactacggcgaggttttccagtggcccatagcatctatgggataccatctgtaataaat
tgtgccaactttgtgtatttccttggcttagaaaaagttttaacacttgatcatccagat
gctgtaaaagtgttcacccgccaactgctagaacttcataagggccaaggcttggatatt
tactggagagacacctatacctgtcctacagaagcagagtataaaaccatggttctgcaa
aaaacaggtggcctttttggactagctgttggcctcatgcaattgttctctagctataag
aaagatttaaaaccactccttaacactcttgggctcttctttcaaattagagatgactat
gcaaacttgcactccaaagaatatagtgagaacaaaagtttttgtgaagacctaactgaa
gggaagttcagtttcccaactatccatgccatatggtctaggccagaaagcactcaggtg
cagaatattctgcgacaaaggactgaaaatgtggacataaaaaaatattgtgtacattac
cttgaggatgtgggttcttttgaatatacccggaaaacattaaaagaacttgaggctgaa
gcttacaaacaaattgaatctcttggggacaaccctgagcttacagcactacttgaatat
ttaagcaaaatgttcaaggacgacgagaactga
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