Podarcis raffonei (Aeolian wall lizard): 128411022
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Entry
128411022 CDS
T09310
Symbol
BABAM2
Name
(RefSeq) BRISC and BRCA1-A complex member 2
KO
K12173
BRCA1-A complex subunit BRE
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
128411022 (BABAM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
praf04121
]
128411022 (BABAM2)
03036 Chromosome and associated proteins [BR:
praf03036
]
128411022 (BABAM2)
03400 DNA repair and recombination proteins [BR:
praf03400
]
128411022 (BABAM2)
Ubiquitin system [BR:
praf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
128411022 (BABAM2)
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
BRISC complex
128411022 (BABAM2)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
128411022 (BABAM2)
DNA repair and recombination proteins [BR:
praf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
128411022 (BABAM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE
UL17
Motif
Other DBs
NCBI-GeneID:
128411022
NCBI-ProteinID:
XP_053238934
LinkDB
All DBs
Position
3:90214949..90355718
Genome browser
AA seq
383 aa
AA seq
DB search
MSPEVALHRISPALSPFVSNVVRNGKVGLDATNCLRITDLKSGCMSLTLGPSCDRFKLHI
PYAGETLKWDIIFNAYYPELPPDFIFGEDAEFLPDPSALHNLASWNPSNPECLLLVVKEL
VQQYHQFQCSRLRESSRLMFEYQTLLEEPQYGENMEIYAGKKNNWTGELSARFLLKLPVD
FSNIPTYLLKDANEDPGEDVALLSVSFEDTEATQVFPKLYLSPRIEHALGGSSALHIPAF
PGGGCLIDYVPQVCQLLTNKVQYVIQGYHKRREYIAAFLSHFGTGVVEYDAEGFTKLTLL
LMWKDFCFLVHIDLPLYFPRDQPTLTFQSVYHFTNSGELYSQAQKNYPYSPRWDGNEMAK
RAKAHFKTFVPQFQEAAFANGKL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtcccctgaagttgctttgcacagaatatctccagcactttctccttttgtttctaat
gtggtcaggaatggaaaagtaggattggatgcaactaactgtttaaggattacagatctg
aaatctggctgcatgtccttgactcttgggcccagctgtgatcgctttaagttgcatatt
ccatatgctggagaaacactaaaatgggatataatttttaatgcctactatccagaactg
cctcctgacttcatctttggagaggatgctgaattccttcctgatccctcagctttacat
aatttggcctcatggaatccctcgaacccagaatgcctgctgcttgttgtaaaagaactt
gttcaacaatatcaccagttccagtgcagcagactacgtgagagctctcgcctcatgttt
gaatatcaaacattgcttgaagaacctcagtatggagaaaacatggaaatttatgctggc
aaaaagaacaactggactggtgaattgtcagctcgtttccttctgaaattgccggtggac
ttcagcaacatccccacttaccttctcaaggatgcaaatgaagaccccggggaagatgtt
gctcttctttctgtcagctttgaggatacagaagctactcaagttttccccaaactgtat
ctgtctccacgaatcgaacatgctcttggaggatcttctgcccttcacatccctgctttt
ccaggtggaggctgcctcattgattacgtaccccaagtatgtcaactcctaaccaacaag
gtacaatatgttattcagggttaccataagagaagagagtatattgcagcgtttcttagt
cactttggaactggcgtggtagaatacgatgctgagggtttcacaaaactcaccttgtta
ctgatgtggaaagatttctgcttcctggttcacattgacctcccactctattttcctcgg
gaccagccaacattaacgtttcagtctgtctaccacttcactaacagtggggagctctat
tcgcaagcccagaaaaactacccctacagtccacgttgggatggcaatgagatggccaaa
agagcaaaggctcatttcaaaacatttgtccctcagttccaggaggcagcatttgccaat
ggaaaactctaa
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