Podarcis raffonei (Aeolian wall lizard): 128411493
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Entry
128411493 CDS
T09310
Symbol
OTOF
Name
(RefSeq) otoferlin
KO
K19949
otoferlin
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
praf04131
]
128411493 (OTOF)
Membrane trafficking [BR:
praf04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
128411493 (OTOF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
128411493
NCBI-ProteinID:
XP_053239819
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All DBs
Position
3:complement(122488714..122688039)
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AA seq
2003 aa
AA seq
DB search
MALVVHLKTVTDLRGKGDRIAKVAFRGLSFYTRVIENCEDEAPFDETFRWPVASSIDVNE
MLEVQVFNYSKVFSNRLIGTFQMVLQKVVEEGQLEVTDTLIDDNNASIRTSISLEIRYQA
MDGTVGAWNDNEFLESPNAPSEGDPHEMDVLLPPQRQSPSKTSAAERALRRAGKGVFSAM
KLGKARGQKDDHHRKQDEPAVLEAEDLDRKAMRLGGGLDPDTISLASVTAVTTNVSNKRS
KPDIKMEPSAGRPMDYQVSVTVIEARQLVGLNMDPVVCVEVGDEKKYTSMKESTNCPYYN
EYFVFDFHVPPDVMFDKIVKISVIHSKNLLRSGTLVGSFKMDVGTVYTQPEHQFYHKWAL
LSDPEDITAGLKGYVKVDIAVVGKGDNIKTPHKANETDEDDIEGNLLLPDGVPPERQWAR
FYIKIYRAEGLPRMNTSIMANVKKALIGENKDLVDPYVQVLFAGQKGKTSVQKSSYEPTW
NEQIVFTEMFPPLCKRIKVQIRDSDKVNDVAIGTHFIDLRKISNEGDKGFLPTFGPAWVN
MYGSTRNYTLMDEHQDLNEGLGEGVSFRARLLLSLAVEILDTSNPELTSSTEVQVEMATA
VADNCTGKMDEFFLFGSFLEATMIDRKNGDKPINFEVTIGNYGNEIDGMSKPMIKKKKDS
GGDGNEEESQLLENESDEESTDDGEFVSISSSPPLRPLITDRNYFHLPYFEKKPCIYIKS
WWQDQRRRLYNSNIMDKIADKLEEGLNDVHEMMKTEKPHPERRLRGVLEELSSACLRFVT
LSNKDQNHSSRTRLDRERLKSCMRELETMGQQAKTMRSQVKKTTIRDKLKQAQNFLQKLR
FLADEPQHSIPDVFIWMMSNNKRIAYARIPSKDILYSIVDEETGKDCAKVKTVFLRLPGK
KGFGPAGWTVQAKMEIYLWLGLNKQRKDFLSGLPCGFEEKKLPKGQNIPSFPPISLLYNM
KQVFQLRVHMYQARSLFAADSSGLSDPFARVFFITQSQCTEVLQETLCPTWDQLLVFDNV
ELYGEVHEMRDDPPIIVIEIYDQDTVGKADFMGRTFAKPVVKMSDEEYCPPRFPPQLEYY
QIYRGNSTAGDLLAAFELLQIGPAGKSELPPIDGPTDMDRGPILPVPLGIRPVLSKYRVE
ILFWGLRDLKRVNLAQVDRPRVDIECAGRGVQSSLIQNYKKNPNFSTLVKWFEVDLPENE
LLHPPLNIRVVDCRAFGRYTLVGSHAVNSLRKFIYRPPDKKAQHWSTAAKLMSAYAALAN
GGPISHPTGEIVVNMEPEAPIKKMETMVKLEANSDAVVKVDVSEEEKEKKKKKKKKGGAE
EEEEDEPDESMLDWWSKYFVSIETMKELLRQQEAAAAEAEEKDEMDMSEGSKGQGKTKEK
VKAPKEDKKKKQQQGQPPTSEGPEKKNKQKIDELKVFPKELETEFDYFEDWLHTFNLFRG
KIGDDDDHAADEDRIVGRFKGSMCVYKVPLPDDITKEAGYDPNFGMFQGIPSNDPINVLV
RVYVVRATDLHPADINGKADPYVVIKLGKTDIKDKENYISKQLNPIFGKSFDIEATFPME
SMLTVAIYDWDLVGSDDLIGETKIDLENRYYSKHRATCGITQNYSIHGYNMWRDPQKPTQ
ILSKLCKEGKLDGPHYGPGGRVKVTNRVFTGPTEVEDENGQKKQTDEHLALTVLHHWEEI
PRVGCKLVPEHVETRPLLNPDKPGIEQGRLELWVDMFPMDMPAPGPAIDISPRKPKKYEL
RVIVWNTDEVVLEDDDYFTGEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRYI
FPFDYLAAEEKIVISKKESMFSWDETEYKIPARLTLQVWDADHFSADDFLGGIELDLNRF
PRGAKTAKQCSMELGTGEIEVPMVSIFKQKRVKGWWPFLARDENDEMEMTGKVEAELHLL
TAEEAEKSPAGLARNEPDPLEKPNRPDTSFIWFLNPLKSIRYLICTRYKWLIIKIVLALL
LIIMVALFLYSMPGYMVKKLLGA
NT seq
6012 nt
NT seq
+upstream
nt +downstream
nt
atggctttggtcgtgcacctgaagacggtcactgacctgcggggcaaaggagacaggatt
gccaaagtagctttcagaggcctttccttctacacccgagtaatcgagaactgcgaggat
gaagctccatttgatgagaccttccgatggcccgttgcaagcagcatcgacgtcaacgag
atgctggaggtccaggtcttcaactacagcaaagtcttctccaacaggctcatcgggacg
ttccagatggtcttgcagaaggtggtggaggaagggcagctggaggtgacggataccttg
atcgatgataacaatgcttccatccggaccagcatctccctcgagatcaggtaccaggcc
atggatggcaccgtcggggcttggaatgacaacgagttcttggagagtcccaacgcgccc
tcggagggagacccccacgagatggacgtcctgctgcccccgcagcggcagtctcccagc
aagaccagcgccgcagagagggctctccggagagctgggaaaggcgtcttttcagccatg
aagctgggcaaagcacgtggtcaaaaagatgaccaccacaggaagcaagatgaaccggcg
gtcctggaagccgaagacctggaccggaaggcgatgcggctgggaggcgggctggaccca
gacaccatctccctggcatcggtcacagccgtcaccaccaatgtatccaacaagagatcc
aagccagatattaaaatggagcccagcgctgggaggcctatggactaccaggtcagcgtc
acggtcattgaggcacggcagctggtggggctcaacatggaccctgtggtctgcgtggag
gtgggggacgagaagaaatacacgtccatgaaagaatcgaccaactgcccctactacaat
gagtattttgtcttcgacttccacgttcccccagatgtcatgttcgacaaaatcgtcaag
atatcggtgattcattccaaaaacctcctgcgcagcggaaccttagtcggctccttcaaa
atggacgtcggaaccgtttacacccagccagagcaccagttctaccacaagtgggcgctc
ctctcggacccggaggacatcaccgcggggctgaagggttatgtgaaggtggacatcgca
gtggtgggcaaaggagacaacatcaagacgccccacaaggccaacgagacggacgaggac
gacattgaggggaacctgctgcttcccgacggcgtccctccagagaggcagtgggcacgc
ttctacatcaagatctaccgggcagagggtctccctcgcatgaacaccagcatcatggcc
aacgtcaagaaggccctcattggagagaacaaggacctggtggacccctacgtccaggtc
ctctttgcaggacaaaaggggaaaacctcggtccagaaaagcagctacgagcccacgtgg
aacgagcagattgtcttcacggaaatgttccccccactgtgcaagcggatcaaggtccag
atccgtgattctgacaaggtcaacgacgtggccattgggacccattttatcgacctcagg
aagatctccaacgaaggagacaaaggcttcctgcccacgtttggccctgcctgggtgaac
atgtacggctctacgcgcaactacaccctgatggacgagcaccaggacttgaacgagggc
ctgggtgaaggggtctccttccgtgcccgcctcctgctcagcttggccgtggaaatcttg
gataccagcaacccggagcttaccagctccaccgaagtccaagtcgagatggccacggca
gttgccgacaactgcacgggcaagatggatgagttctttctctttggatccttcctggag
gccaccatgattgacaggaagaatggagacaagcccatcaactttgaggtcaccataggc
aattatggcaatgaaatcgacgggatgtccaagcccatgatcaagaagaagaaggatagt
ggaggagatggaaacgaggaagagtctcagctgctggagaacgagagtgatgaggaaagc
acagacgatggggagtttgtctccatctcctcttctccacctttgaggcctttgatcacc
gacaggaactactttcacctgccgtattttgagaagaagccttgcatctacatcaagagc
tggtggcaggatcagcggaggcgtctctacaactccaacatcatggacaagattgcggac
aagctggaagaaggcttgaatgatgttcatgagatgatgaagactgagaagccccaccca
gaacggcgcctccgcggggtcctggaggagctgagcagtgcatgcctgcgatttgtgacc
ctctccaacaaggaccagaaccattcctcccggacgcggctggaccgggagaggctgaaa
tcctgcatgcgggaactggagacaatgggtcagcaggccaagaccatgagatcccaggtc
aagaaaaccaccatcagagacaagttgaagcaggcacagaacttcttgcaaaagctgcgg
ttcctggcagatgagccccaacacagcatcccggatgtcttcatctggatgatgagcaac
aacaagcgcatcgcctacgcccgcatcccctccaaagacatcctctactccatcgtggac
gaggaaacggggaaggactgcgccaaagtgaagaccgtcttcctgaggttaccggggaaa
aaaggttttgggccggccggctggacagtgcaagccaagatggagatctatttgtggctg
gggctgaacaaacagcgcaaggacttcctcagcggcctgccctgcggctttgaggagaag
aaacttcctaagggccagaacatcccttccttcccacccatcagcctcctgtacaacatg
aagcaggtcttccagcttcgtgtccacatgtaccaagccaggagtctcttcgcagctgac
agcagcggcctctccgatccctttgctcgggtctttttcatcacgcagagtcagtgcacg
gaggtcctccaggagacactttgccccacatgggaccagctcctggtgtttgacaacgtg
gagctatatggggaagtccatgagatgcgggacgaccctcccatcattgtcatcgagatc
tatgaccaggacaccgtgggaaaggctgactttatgggccgaacgtttgccaagcctgtg
gtgaagatgtcggatgaggagtactgtccgccccgcttcccgccccagctagagtactat
cagatctaccggggcaactccaccgccggggacctgctggctgcctttgaacttctccag
attggcccagccgggaagtcagagctgcctcccattgacggccccacggacatggatcgg
ggccccattctgcctgtgcctttgggaatccgccctgtgttgagcaaatacagagtagag
atcttgttctggggactgagagacctgaagcgcgtgaacttggcccaggtggatcggcct
cgagtggacattgaatgtgccgggaggggagtccagtcgtccctcatccagaattacaag
aaaaaccccaatttcagcactttggtcaaatggtttgaagtggatcttcctgagaacgag
cttcttcatcctcccctgaacatccgcgttgtggattgccgcgctttcggacgttacacc
ctcgtgggaagccacgctgtgaactccctgaggaaattcatctataggcctccggataag
aaagctcagcactggagcacagcagctaagctcatgagtgcctatgcagccctggccaac
ggtggacccatctctcaccccacaggggaaatcgtggttaacatggagcccgaggccccc
atcaagaagatggaaaccatggtcaagctggaagcgaactctgatgcggtcgtgaaagtg
gatgtgtcggaagaagagaaggagaagaagaagaaaaagaagaagaaagggggtgcagag
gaggaggaggaggatgagcctgacgagagcatgctggactggtggtccaagtattttgtt
tccatcgagacgatgaaggagctgcttcgacagcaggaggcggctgcagccgaagcggag
gagaaggacgagatggatatgtctgagggctccaagggccaagggaagaccaaagagaaa
gtcaaggcccccaaagaagacaagaagaagaagcagcaacaggggcagccgccgacgtcc
gagggtcccgagaagaagaacaagcagaagatcgatgagcttaaggtgttccccaaagag
ctggagacggaatttgactactttgaggactggctgcacactttcaacctctttcggggg
aagattggtgatgacgatgaccacgcagccgacgaggatcgcatcgtgggcaggttcaaa
ggctccatgtgcgtctacaaagtgccactccctgatgacatcaccaaagaggcggggtac
gacccaaatttcggcatgttccagggcatcccaagcaacgaccccatcaacgtgttggtc
cgggtctacgtggtgagggccaccgatctgcatcccgccgacatcaacggcaaagctgac
ccgtacgtcgtcatcaagttggggaagacggacatcaaggacaaggagaactacatctcc
aaacagctgaaccccatttttggaaagtcgtttgacatcgaggccacttttcccatggag
tccatgttgacagtggccatttacgactgggatctggtgggatccgatgatctgattggc
gagaccaagatcgacctggagaaccgatactacagcaagcacagggcgacctgtgggatc
acacagaactactccatccatggttacaatatgtggagagaccctcagaagcccacccag
atcttgtccaagttatgcaaagaggggaagctggacggcccccactacggccctggcggc
agagtgaaggtgaccaaccgggtcttcacgggacccacagaagtggaggacgaaaacggc
cagaagaagcagacggacgagcatctagcgctgactgtcttgcaccactgggaggagatc
ccgcgtgtgggctgcaaactggtgcctgagcacgtggaaacacggcccctgctgaacccg
gacaagccaggcattgagcagggacggctggagttgtgggtggacatgttccccatggac
atgccggcaccaggacccgccattgacatctcgccgaggaagccaaagaaatacgagctt
agagtgatagtgtggaacacagatgaggtagtcctggaggacgatgattacttcactggc
gagaaatccagtgacatttttgtccgggggtggctgaagggtcagcaagaagacaagcaa
gacactgacgtccactaccactcgctgaccggcgagggcaacttcaactggcgctacatc
tttcctttcgactaccttgcggctgaggagaagattgttatctcgaagaaagagtccatg
ttctcctgggacgagaccgagtacaagattccggcccgactcacgctacaagtgtgggat
gccgaccacttttccgccgatgacttcctcggaggcattgagcttgacctgaaccgcttc
ccacgtggcgctaagaccgccaagcagtgcagcatggagcttgggacgggggagattgag
gtgcccatggtctctatcttcaaacagaagagggtgaagggctggtggcccttcttggca
cgagacgagaacgacgaaatggagatgacgggaaaagtggaggccgagcttcaccttctg
acggccgaggaagccgagaaaagtccggccgggctggctcgtaacgagcccgacccattg
gagaaacccaatcgtccggatacatccttcatctggttcctgaacccgctcaagtccata
cggtacctcatctgcacccgctacaagtggctcatcatcaagatcgtcttggccctgctg
ctgatcatcatggtggcccttttcctctactccatgcccggctacatggtcaaaaagctc
ctcggagcatga
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