Podarcis raffonei (Aeolian wall lizard): 128412578
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Entry
128412578 CDS
T09310
Symbol
TRPC6
Name
(RefSeq) short transient receptor potential channel 6
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
praf04040
]
128412578 (TRPC6)
Ion channels [BR:
praf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128412578 (TRPC6)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Cmr1_C
HD_assoc_2
APC_u15
Motif
Other DBs
NCBI-GeneID:
128412578
NCBI-ProteinID:
XP_053241653
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Position
4:complement(21046560..21114867)
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AA seq
897 aa
AA seq
DB search
MSQIGQPPFGPSCSPATSGARRNDSRDYLLMDSEACEENCTAPYAYYPARGAENRHALRQ
QTIVREKGRRLANRGPAYMFNDHSTSLSIEEERFLEAAEYGNIPVVRKMLEECTSLNVNC
VDYMGQNALQLAVANEHLEITELLLNKENLSRVGDALLLAISKGYVRIVEAILGHPAFAE
GKRLATSPSQSEVQHDDFYAYDEDGTRFSHDVTPIILAAHCQEYEIVHTLLRKGARIERP
HDYFCKCSECNEKQKHDSFSHSRSRINAYKGLASPAYLSLSSEDPVMIALELSNELAVLA
NIEKEFKNDYKKLSMQCKDFVVGLLDLCRNTEEVEAILNGDVELHHGEHGRPSLSRLKLA
IKYEVKKFVAHPNCQQQLLSIWYENLSGLRQQTMAVKFLVVLAVAVGLPFLSMAYWIAPC
SKLGRIMRGPFMKFVAHAASFTIFLGLLVMNAADRFDGTKLKPNESRTDGKQLFRMKTSC
FSWMELLIISWVIGMIWSECKEIWSQGPKEYLFELWNMLDFGMLAIFAASFIARFMAFWH
ASRAQSMVDAGVDMKNLKTVTLPPSIKYYTLARIDWDPSDPQIISEGLYAIAVVLSFSRI
AYILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYLGAKQNEAFTT
VEESFKTLFWAIFGLSEVKSVVINYRHKFIENIGYVLYGVYNVTMVIVLLNMLIAMINSS
FQEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSLIYFSLRIKKWVFKLLFC
NRKGFQEDAEMNKLGQSKESSIRSSDDLNLNSLRNPQRKYQKIMKRLIKRYVLKAQVDKE
SDEVNEGELKEIKQDISSLRYELLEEKSQNTEDLAELIRKLGEKLCIEPKQEQRTSL
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaattggccagccgcccttcgggccgagctgctctccggcgacgagcggggcg
cggaggaacgacagccgcgactacctgctgatggactcggaggcgtgtgaggagaactgc
acggcgccctacgcttactaccccgctagaggcgctgagaacagacatgccctccgacag
cagactattgtccgagagaaaggcaggaggcttgccaatcgtgggccagcatatatgttt
aatgaccactcaaccagcctatctattgaagaggagcgttttttggaagcggcagaatat
ggcaacattcctgtggtccgcaagatgctggaggaatgtacctcgctcaatgtgaactgc
gtggactacatggggcagaatgctctgcagctcgccgtcgcgaatgagcacctggaaatc
accgagctcttacttaataaggagaacctgtcacgggttggggacgccctgctcttggcc
attagcaaaggttatgtccggatagtagaagccatcttgggtcaccctgcgttcgccgaa
ggcaagaggctggccacaagccccagccaatcggaggtgcagcatgatgacttttatgcc
tacgacgaagacggcacccgcttctctcacgacgtgacccccatcatcctagctgctcac
tgccaagagtacgaaatcgtgcacaccttgctgaggaaaggcgctcgcatcgagaggcct
cacgactacttctgcaaatgcagcgaatgcaacgagaagcaaaagcacgattccttcagc
cattccaggtccaggatcaatgcctacaaaggtttagccagccctgcttacctttccttg
tctagcgaggaccccgtaatgattgccttagaactgagcaatgagctggctgtgcttgct
aacattgaaaaagaattcaagaatgattacaaaaaattgtctatgcagtgcaaagacttt
gtggttggacttcttgatttatgcagaaacacagaagaagtagaagctattctaaacgga
gatgttgagctgcaccacggggagcacggacgccctagccttagccgcctaaaacttgcc
ataaagtatgaagtcaaaaagtttgtagcacatccaaactgccagcagcagctcctctct
atctggtatgagaatctgtcaggtttacgacaacagacgatggcagtgaagtttttagtg
gttcttgctgttgctgttgggctgccattcctgtcgatggcttattggattgctccatgc
agtaagttgggtagaataatgcgcggaccctttatgaaatttgtggcacatgcagcctct
ttcaccattttccttggtttgctggtcatgaatgcggcagacaggtttgatggcaccaaa
ctgaagcccaatgaaagcagaacggatggaaaacagctgttcaggatgaaaacttcgtgc
ttctcgtggatggagttgctgattatatcatgggtaataggtatgatatggtccgagtgt
aaagagatttggtcccaaggtcccaaggaatacctgtttgagttgtggaatatgctggat
ttcgggatgctagctatttttgcagcttcgttcattgcaaggttcatggcattttggcat
gcttccagagcccagagcatggtcgatgcaggtgtggatatgaagaacttgaaaacggtg
acattgcctcccagtataaaatactacactttggcaagaatagactgggatccatccgac
cctcagatcatatctgaaggcctgtatgcaattgctgtggtcttaagcttctcaagaatc
gcctatattctgcccgccaatgaaagcttcggacctctacagatatcgcttggcagaact
gtgaaagacatattcaagttcatggtcatatttatcatggtttttgtggccttcatgata
ggaatgtttaatctctactcttactacctgggggcaaagcaaaacgaagccttcactaca
gtggaagaaagcttcaagactttgttctgggcaatatttggactctcagaagtgaaatca
gttgtcataaactataggcacaaatttattgagaacattggttatgtcctttatggggtt
tataacgtcaccatggttattgttctgttgaacatgcttatcgcgatgatcaacagctca
ttccaagagattgaggatgatgctgatgtggaatggaagtttgcaagagcaaaactgtgg
ttctcctattttgaggagggcagaacgctcccggtgccgttcaacctagtgcctagcccc
aaatctctgatttacttctcgctcagaataaagaagtgggtttttaagttgttgttttgc
aatagaaaaggtttccaggaagacgctgagatgaataagctaggtcaaagtaaggaatca
agtataagaagctcagatgacctcaacttaaacagcttaaggaaccctcaaaggaagtat
cagaaaattatgaaacgtcttatcaagcgatacgtactgaaagctcaggtggacaaagaa
agtgatgaagtcaatgaaggtgagctgaaagaaattaaacaggacatctcaagcctccgt
tacgagctccttgaagaaaaatcacagaacacagaagacctggcagaactcatccggaaa
cttggggagaaactgtgtattgagccaaaacaggaacaaaggacttctctctga
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